Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,9010AC32.8% 225.5 / 85.7 249R661R (CGA→CGC) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base A (115/47);  new base C (72/7);  total (188/61)
Fisher's exact test for biased strand distribution p-value = 2.77e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 258 total aligned reads displayed.

CAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAC  >  NC_000913/1708753‑1709049
                                                                                                                                                    |                                                                                                                                                     
cAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGACCGCAAGCTGGAACAGCAACCGGCTAATGCCGTGCCAGCACAACAGGTGGATCCGCGCAAAGCCGCCGTCGCCGCGGCTATTGCCCgcgc                                                                                                                                                     >  7:1242649/1‑151 (MQ=14)
cAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGTGCCAAAGCACGCAACCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAACTCGGCAGAAGAAGCGGCGATTCCCCgcgc                                                                                                                                                     >  5:1176292/1‑151 (MQ=14)
        caggcagagccGCGCAACACCGCCGTCGAAGCAGCTATCGCCCGCGCCAAAGCTCGCAAGCTGGAACAGCAACAGGATACTGCCGACCCAGAACAACAGGGCGATCCGCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAgcgc                                                                                                                                             <  7:922444/142‑1 (MQ=11)
        cAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGCTCGATCCGCGCAAAGCAGCCGTCCAAGCCGCTATTGACCGAGCCAAAgccc                                                                                                                                             >  6:727022/1‑149 (MQ=255)
          ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGCAGCGGCTATTGCACgcgctcacgccat                                                                                                                                            >  8:693106/1‑141 (MQ=11)
            tCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTTGATCCGCGCAAAGCGGCAGTAGCCGCGGCTATTGCCCgcgcgcagggcggggc                                                                                                                                         >  5:24371/1‑139 (MQ=11)
              gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAAGAGCGGAAGATCCGCGGAAAGCGTAAGACGAAGCCGCTATTGCAAGAGCCACCGCGCGCacgc                                                                                                                                       >  2:60470/1‑148 (MQ=11)
                 ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTGGATCCGCGCAAAGCAGCAGTCGAAGCGGCTATTGCCCGCGCACAAGCGCGCAAACggg                                                                                                                                    >  4:1556060/1‑151 (MQ=14)
                   cccccacgccgccgccgccGCCCCTATCCCCCGCGCCAAAGCCCGCAATCTGGAACAGCAACAGGCTAATGCCGACCCAGACCTCCCGGTCGATCCGCGCAAAGCGGCCGGCGAAGCCGCTATCGCCCGAGCCAAAGCGCGCAAACGGGaa                                                                                                                                  <  1:1461744/144‑1 (MQ=2)
                    cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCGGCCGTCGCCGCGGCTATTGCCCGCGCGCACGCCCGAAAACgcgccc                                                                                                                                 >  3:127435/1‑146 (MQ=11)
                     cccaaGCCGCCGGCGAAGCCGCTATTTTATTTGCCAAAGATGGCTACATCGTAGAGAATGAGCCTTTTGCGGAGTCACAACCACTGCTCTATCGCCGCAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACa                                                                                                                                <  3:911225/148‑1 (MQ=2)
                     ccaccgccgccCTCGAAGCCGCTATCGCCCGTTCTATATATTGCAAGCTGGAACAGCAACAGGCTAATTCCGAGCCAGAAGATTAGGTTTATCGTCGCTAATCCGATGTCGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAATCGGGAACa                                                                                                                                <  2:499902/146‑1 (MQ=9)
                      cAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGACGCGGCTATTGCCCGCGCGAAAGCCCCAAAACgggccc                                                                                                                                 >  2:741141/1‑146 (MQ=14)
                           ccgccgGCGAACCCGCTATTGCCCGTGCCAAAGCTCGCAATCTGTAACAGCAACAGGCTAATGCCGACCGAGAACAACAGTTCGCTCCTCTCAAAGGCTCCGTCGATGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAAcc                                                                                                                          <  3:1030294/151‑1 (MQ=255)
                            ccccgTCGCAGCCCCTATTGCCCGTGCCAAAGCTCTCAATCTGGAACAGCAACAGGCTAATGCCGATCCATAACATCAGGTCGATCCGCGCAAAGGCGCCGTCGAAGACGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCg                                                                                                                         <  2:1834279/149‑1 (MQ=14)
                             gccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTGCATGGGAACCGGGGAGCTCGGCGCTAAGCTGCCCTCGCAGCCGCTATTCCCCGCGCGACTGCTGGCAAACTGGAACAGCACCCgg                                                                                                                        >  7:489038/1‑151 (MQ=2)
                             gccgTCGAAGCAGCTATCGCCCGCTCCAAAGCTCTCAATCTGGAACAGCAACAGGATAATCCCGACCCAGAACAACTGGGCGATCCTCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCgg                                                                                                                        <  3:373086/151‑1 (MQ=11)
                              ccgTCCCAGCCGCTAGCCCCCGCGCCAACGCTCGCAATGTGGAACAGGAACAGGCTAAAGCCGATCCAGATCACGTACTGGATGCGAGCAGAGGGGGCTTCGAAGCCGCTATGGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGc                                                                                                                       <  7:25863/151‑1 (MQ=255)
                               cgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCAGCGCAAAGCGGCAGTAGCAGCCGCTATTGCCCGCGCCAAAGCCCGAAAACGCGAACAGCACCAGGCt                                                                                                                      >  5:826369/1‑151 (MQ=14)
                                  cGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAACATCCGAAGAACCACCTATTGCCAAAGACAAAGCCAGCAAGAGGGAAAATCAACCGTCTAAt                                                                                                                   >  2:193273/1‑151 (MQ=14)
                                   gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATg                                                                                                                  >  3:721304/1‑151 (MQ=255)
                                   cacgCCGCTATTCCGATTGCCAAAGCTCGCAAGCTGGAATATTAAAATGATAATGCGTAACCAGATAAATAGCTATATCCGCTCAATGTTTCCGTCGAAGACGCTATTGCGATATCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATg                                                                                                                  <  6:378997/148‑1 (MQ=255)
                                    aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTGGACGCGGCTATTGCCCGCGCGCACGCGCGCAAAGCGGCACAGCAGCAGGGTAAtcc                                                                                                                 >  7:176411/1‑149 (MQ=14)
                                         gCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCAAACGCCAAAAAACCCGACCAGCAAAACGCAAATGCGGAGc                                                                                                            >  8:1278407/1‑151 (MQ=14)
                                            aTTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCCAACGCCCGCAAACGCGACCAGCACCAGGCTAATGCGGAGcgcc                                                                                                         >  3:960204/1‑148 (MQ=14)
                                             ttGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTGGCAGCGGCTATTGCCCGCGCCAAAGCCCGCAACCGGGCCCAGCAACAGGGTAATGCGGAggc                                                                                                           >  6:817372/1‑146 (MQ=14)
                                                    tGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGCCCGCGGAAGAGCACCGGTCTCCGCTCCACGCAGCCCTCGATGGCGCTATTGCCCGCGCCAGCGGGCGCAAACGGGAACCGCCCCCGGGTAcggcgggggcggctgcggcg                                                                                                 >  5:735790/1‑137 (MQ=2)
                                                      ccAAAGCCCTCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGGCGATCCTCGCAAATCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGTGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGt                                                                                               <  3:88889/151‑1 (MQ=14)
                                                      ccAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAACAACCCAACAGGCTCAGCAACCGACAAATGCTGACGCagaagataacgg                                                                                               >  4:255957/1‑145 (MQ=14)
                                                          aGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCCGTAGAAGCGGCTATTGCCCGCGCAAAGGCGCACAAACGCGAACAGCAGCAGGCTAATGACGAGGCagaagtgcagtttaa                                                                                            >  3:847439/1‑140 (MQ=14)
                                                             aCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCTAAAGCCAACAAACCCGACCAGCAGCAGGATAAAGAGGAGCAAGAAGTACAGGTAGATCcg                                                                                        >  4:447891/1‑151 (MQ=11)
                                                                cAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGAGCAAACGCGAACAGCACCAGGCTAAAGACGAGCCAGAAGAACAgttacctaccccc                                                                                     >  3:1312944/1‑139 (MQ=14)
                                                                 aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCAGTAGACGCGGCTATTGCCCGCGCGAAAGCCCGCAAACGGGCCCAGCACCAGGCTAATGCGGAGCCAGAAGAGCAGGTTGCTCAgcgc                                                                                     >  3:1752829/1‑150 (MQ=14)
                                                                 aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGACGCCGCTATTGCCCGCGCGCAAGCGCGCAAACGCGCACAGCAGCAGGCTAATGCGGAGCCAGAAGAGCAGGtagctaagcga                                                                                     >  2:275910/1‑140 (MQ=14)
                                                                 aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCCCAAAAACGCGAACAGCAACAGGATAAAGCGGAACCACAACAACATGTTGATCCgcgc                                                                                     >  6:484476/1‑150 (MQ=14)
                                                                    cTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCCCAAAAACGCGAACAGCACCAGGCTAATGCGGAGCCATAAGAACAGGTTGAtagacccaa                                                                                   >  6:740725/1‑141 (MQ=14)
                                                                     tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGCGAACAGCACCAGGCTCTTCCGGAGCCAGAAGAACAGGTTGCTCCCCGCACAGc                                                                                >  1:1001528/1‑151 (MQ=14)
                                                                     tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGACGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGACCAGGTTCCTCCGCGCACAGc                                                                                >  1:113990/1‑151 (MQ=14)
                                                                     tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGCAGCCGCTATTGCCCGAGCAAAAGCCAAAAAACCCGCCCAGCAGCAGGAAAATCCGAAGACAGAAGAGCAGGGAGATCCGCGCaa                                                                                   >  4:827976/1‑148 (MQ=2)
                                                                      ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGGTCCGCGCAAAGCCGCAGGCCAAGCCGCTATTGCCCGAGCCAAATCCCGCAATCTGGAACAGAAACAGGCTAATGCGGGGGCAGAAGCGCAGGTGGGTCCgggccccggg                                                                               >  1:1273604/1‑145 (MQ=11)
                                                                         aCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCCCGCAAACGGGCACAGCAACAGGCTAATGCGGAGCCAGAAGACCAGGTCGCACCGCGCACAGCGGcc                                                                            >  3:1177598/1‑151 (MQ=14)
                                                                              aaCAGGCTAATACCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGCAGCCGCTATTGCCCGAGCAAAGGCCAGCAACCCGGACCAGCACCAGGATAAAGAGGAGCAAGAAGAGGAGGTGCCACCGCGCAAAGCGGCCgatgc                                                                       >  2:1704507/1‑147 (MQ=2)
                                                                               aCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGACGCCGCTATTGCCCGCGCCAACGCCCGCAAACCGGAACAGCACCAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGtggcc                                                                      >  2:1164448/1‑147 (MQ=14)
                                                                               aCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGac                                                                      >  7:167649/1‑150 (MQ=255)
                                                                                  cccgaccgcccacccAGACCCACAGGGCGATCCTCTCAAACCCCCCCGCGACGCCCCTATAGCCCGAGCCATCCCGCGCCATCCGCACCCGCAACCTGCTAACTCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCg                                                                   <  5:515287/138‑1 (MQ=2)
                                                                                     tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCt                                                                >  5:157033/1‑151 (MQ=255)
                                                                                       aTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTTGCAGCGGCTAt                                                              >  4:207429/1‑151 (MQ=255)
                                                                                       aTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGCGCCAAAGACCGCAAACGGGACCAGCAACCGGCTAATGCGGAGCAAGAAGAACAGTTTGATCAGCTCAAAGCTGAAGTAGAAGCGGCTAt                                                              >  1:640424/1‑151 (MQ=17)
                                                                                        tGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGAACCGAGCAAAGCTGCCGTAGCAGCGGCTAtt                                                             >  2:1297866/1‑151 (MQ=17)
                                                                                            gaaccAGAAGAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGAAGCTATTGCCCGACCGAAAGCCCGCAAGCTCGCACCGCAACCGGCTAATGCGGCGCCAGCAGCACATGTAGATCCGCGCACAGCGGCCGTCGCCGCGGCGATTggcg                                                         >  3:344048/4‑148 (MQ=2)
                                                                                            gAGCCAGAACCCCAGCCGGATCCGCGCAACGCGGCCGTCGAAGCGCCTATTGCACGCGCGAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGccc                                                         <  1:552719/151‑3 (MQ=18)
                                                                                            gAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCAc                                                         >  5:1786790/1‑151 (MQ=255)
                                                                                             aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGACGCGGCTATTGAAcg                                                        >  4:1404853/1‑151 (MQ=255)
                                                                                              gCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGAGCAAACGGGAACAGCACCAGGCTAATGCGGCGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCAcg‑c                                                      >  7:622016/1‑151 (MQ=14)
                                                                                               ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCAcg‑cg                                                     >  7:1157916/1‑151 (MQ=255)
                                                                                                  gAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGAAAAGCTGCAGTAGCCGCGGCTATTGCACg‑cgca                                                   >  6:540392/1‑149 (MQ=17)
                                                                                                    acaacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCTGCCGTGGACGCGGCTATTGCCCg‑cgcaa                                                  >  1:671552/1‑147 (MQ=14)
                                                                                                      aacccgaccaTCAGCGCACAGCCGCCGTCGCACCCGCGATCGACCGAGCCAAAGCGCGCAACCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGc                                              <  3:1316707/142‑1 (MQ=21)
                                                                                                      aacaGGTCGATCCGCGCAAAGCGGCCGTAGAAGCCGCTATTGCCCGCGCAAAAGCCAGCAAACACGAACAGCAACAGGCTAATGCCGACCCATAAGAACAAGTTGATCATCGCAAAGCTGCAGTATCATCGGCTATTGCACG‑AGCTAAGGc                                              >  8:1710420/1‑151 (MQ=2)
                                                                                                      aacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACCGGGTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCGAAGCGGGCTGGGAAGCGGCGAGTGcgggcggccaggg                                               >  1:223960/1‑139 (MQ=14)
                                                                                                      aacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAACCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCGGCGCAAAGCTGCAGTATAAGAGTCTATTGCACG‑CGCCaa                                                 >  3:1537326/1‑148 (MQ=17)
                                                                                                      aacaGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCCCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAATCACATGATGATCCGCGCAAAGCTGCCGTAGCCGCGTATATTGCACG‑CGCGAAGGc                                              >  8:79920/1‑151 (MQ=14)
                                                                                                        caGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGCAGCGGCTATTGCCCg‑cgcgcagggac                                            >  7:1528761/1‑143 (MQ=17)
                                                                                                             cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGCCGCGGCTATTGCACG‑CGCGAAGGCCCGCa                                         >  2:382065/1‑149 (MQ=17)
                                                                                                              gATCCGCGCCAACCCGCCGTGGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAATCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAAGAGGTGGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGc                                      <  5:856729/151‑1 (MQ=255)
                                                                                                              gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTGGAAGCGGCTATTGCACG‑CGCCAACGCACGCAAGc                                      >  2:541463/1‑151 (MQ=255)
                                                                                                               ccccccccAACGCCGCCGTCGAAGCCTTTATTTAACGTTCCACACGTCGAAATCGTGAACACCAACCTGCTACTGTGTATCCATAATATCAGCTCTATCGTTGTAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCt                                     <  8:861725/144‑1 (MQ=255)
                                                                                                                 ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAGAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACCCAAGCTgg                                   >  2:1537272/1‑151 (MQ=255)
                                                                                                                  cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTggc                                  >  3:740020/1‑150 (MQ=255)
                                                                                                                     gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTCGAAc                                >  3:624320/1‑150 (MQ=255)
                                                                                                                     ccAAAGCCGCCGTCTAACCCGCTAAGCCCCGAGACCACCCCCTCAACCGGGAAACGACACCAGACCATGCCTATTCAGAACAACAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTGGAACa                               <  5:1459904/150‑1 (MQ=2)
                                                                                                                      cAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCGCGAAc                                >  2:1779058/1‑149 (MQ=255)
                                                                                                                       aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTGGAACAGc                             >  6:1030887/1‑151 (MQ=255)
                                                                                                                       aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACGAAAGCTCGAACacc                             >  8:1175881/1‑149 (MQ=255)
                                                                                                                       aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTGGAAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTGGAACAGc                             >  4:468343/1‑151 (MQ=255)
                                                                                                                        aaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTGGACCAGc                             >  5:1016415/1‑150 (MQ=255)
                                                                                                                         acctgccgTGGAAGCAGCTATCGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATg                                                                                                                  <  7:675994/61‑1 (MQ=255)
                                                                                                                           cccccctcgaccccGCTATTGCCCGAGCCAAAGCTCGCAATCTTTAAAAGCAACCGCCTAATCCCGATCCAGAACAACAGCTAGATTCTCGCAAATCTCCGGTCTAAGGCGCTATTGCACG‑CGCCAAAGCACGCAAGCTGGAACAGCAACa                         <  6:1692072/139‑1 (MQ=2)
                                                                                                                            cgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCACCGCACGCAAGCTGGGCCAGGAAccg                        >  7:1495924/1‑149 (MQ=17)
                                                                                                                            cgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTGGAACAGCacc                          >  5:1061152/1‑147 (MQ=255)
                                                                                                                             gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTGGCACAGCACCAgg                       >  3:676365/1‑151 (MQ=255)
                                                                                                                                gTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCAAGCAAGCTGGCACAGCAACAGGCt                     >  1:776763/1‑150 (MQ=255)
                                                                                                                                   gAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCCGCGGCTATTGCACG‑CGCCCACGCACGCAAGCGGGCCCAGCAGCAGGCTTAtc                 >  5:306338/1‑150 (MQ=18)
                                                                                                                                   gAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATg                 >  5:597489/1‑151 (MQ=255)
                                                                                                                                     aGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAACGCACGCAAGCGGGAACAGCAACAGGCTCATGCg               >  7:4336/1‑151 (MQ=255)
                                                                                                                                        cgcgATTGCCCGACCCAACGCGCGCAACCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACATGTGGATCCGCGCAAAGCTGCCGTCGATGCGGCTATTGCACT‑CGCCATAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTa            <  1:290115/151‑1 (MQ=17)
                                                                                                                                        cGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTGGCCCAGCACCAGGCTAATGCGGtc            >  8:1112621/1‑150 (MQ=255)
                                                                                                                                           tATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTGGCCCAGCAACAGGCTAATGCGGTagc          >  6:949101/1‑148 (MQ=255)
                                                                                                                                           tATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTCGCACAGCAACAGGCTAATGCCGTAcc          >  6:1344187/1‑150 (MQ=255)
                                                                                                                                           tATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTGCACCAGCCACCGGATAATGCCGTAcc          >  7:821400/1‑150 (MQ=25)
                                                                                                                                           tATTGCCC‑AGCCAAAGCGCGCAAACCGGAACAGCAACCCGCTAATGCCGACCCAGAAGCACAGGTTGATCCGCGCAAAGCGGCCGTAGCAGCCGCTAATGCCCGCCGCAAAGGCAC‑AAAACAGGCACAGCAACAGGCTAAATCCGTACCac        >  4:985157/1‑150 (MQ=9)
                                                                                                                                           tATCGCCCGAGCCAAAGCGCGCAATCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCg                                                                           <  2:715592/86‑1 (MQ=11)
                                                                                                                                           aaatGCCCGAGCCACACCGCTCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCa         <  3:1660072/148‑1 (MQ=255)
                                                                                                                                            aTTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCCCG‑CGCGAACGCACGCAAGCTGGAACAGCACCAGGCTCTTGAGGTagc          >  8:355984/1‑147 (MQ=21)
                                                                                                                                               gCCCGCGCCAAACCGCTCATTCTGGAATAGCATCAGTCTAATTCCGATCAAGAAGATCATGGTTAGTCGCGCAAAGCGGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCagaag     <  8:515596/151‑1 (MQ=9)
                                                                                                                                                 ccGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTGGACCAGCAACAGGCTAATGCGGTACCagaagac   >  1:989709/1‑150 (MQ=255)
                                                                                                                                                  cGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCTATTGCACG‑CGCAAAAGCCAGCAAACACGAACAGCAGCAGGATAAAGCCGTGCAAGAAGAAc  >  6:1485714/1‑151 (MQ=18)
                                                                                                                                                  cGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGATGCAGTGGAAGCGGCTATTGCACG‑CGCAAACGCACGCAAGCTGGAACAGCATCAGGCTAATCCGGTACAagaagacc  >  7:1051770/1‑149 (MQ=25)
                                                                                                                                                    aGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAAc  >  6:697563/1‑149 (MQ=255)
                                                                                                                                                    aGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTGGCAGCGGCTATTGCACG‑CGCCAAGGCCCGCAAGCGGGCCCAGCAGCAGGCTGTTGCGGTGGCagaagtcg  >  8:139108/1‑146 (MQ=18)
                                                                                                                                                    |                                                                                                                                                     
CAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACG‑CGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAC  >  NC_000913/1708753‑1709049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑