Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,642,902 | 0 | C | A | 48.1% | 166.4 / inf | 400 | A77A (GCG→GCT) | rsmJ | 16S rRNA m(2)G1516 methyltransferase, SAM‑dependent |
Reads supporting (aligned to +/- strand): ref base C (117/90); new base A (103/89); total (220/180) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.15e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.51e-01 |
Only 100 of 406 total aligned reads displayed.
GTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTAACACCAGCGCCATCAGGTTGTCTTCATCG > NC_000913/3642752‑3643052 | gAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGcc > 1:475704/1‑151 (MQ=255) gcgcGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCAcc < 2:1438098/151‑1 (MQ=255) cgcgGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACcg > 4:196855/1‑151 (MQ=255) cgcgGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACcg > 8:684582/1‑151 (MQ=255) gcgGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGCAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCAGCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACcgc > 7:628592/1‑151 (MQ=255) cgGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCCCCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACcgcg > 7:573793/1‑151 (MQ=255) cgGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACcgcg < 4:1044054/151‑1 (MQ=255) ggCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGa < 3:522053/151‑1 (MQ=255) gCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGac < 2:1295922/151‑1 (MQ=255) cAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGacc > 7:402448/1‑151 (MQ=255) aaCCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACAGCTTTCGCCACCGCCTCACCGCGacc > 1:648846/1‑150 (MQ=255) agaCTGGATTAGTCTCCAGCATCCGCTCGCTGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCTAAGTCCTGCTGTGTCATCGACCTCATCGGTCAAATAATCGCGTTTAATGCGGTCCGCTTTCGCCACAGCCTCACCGCGacgacc < 6:1287603/149‑1 (MQ=255) aCTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCAccgc < 5:1581630/151‑1 (MQ=255) ggATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGGGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCAccgccg < 6:917363/150‑1 (MQ=255) ttACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAAtt > 4:281881/1‑151 (MQ=255) gCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCg < 8:258442/151‑1 (MQ=255) gCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCg > 5:1369886/1‑151 (MQ=255) ccAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGt < 7:1372513/149‑1 (MQ=255) gCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTg > 5:1441680/1‑151 (MQ=255) gatgcGCACGCGGGAGCCGTATTAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTTCATTGGGATTCACCACATCGGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTgc < 1:841072/147‑1 (MQ=255) cATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTgc > 5:656797/1‑151 (MQ=255) cACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATc < 3:143787/151‑1 (MQ=255) aCGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCg < 3:720613/151‑1 (MQ=255) aCGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCg < 1:919015/151‑1 (MQ=255) cgGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGCCCACCGCCGAATTTGCGTCGGTGCGCCATCGCTc > 7:218686/1‑151 (MQ=255) cgGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTc < 2:846784/151‑1 (MQ=255) aGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCCCCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGcc > 5:926224/1‑151 (MQ=255) aGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGcc > 1:609264/1‑151 (MQ=255) cccGACGGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCca < 2:376871/150‑1 (MQ=255) cGACTGAAGCCAGTACACAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCAGATCCGTCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCAGAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCcaac < 6:1638826/151‑1 (MQ=255) gACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCcaaca < 2:17752/151‑1 (MQ=255) gACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCcaaca < 1:137947/151‑1 (MQ=255) aCTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCcaacaa < 4:1120260/151‑1 (MQ=255) gAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACaaaa < 5:1100640/150‑1 (MQ=255) aaGCCAGTACCAAGGCATCGCGCCCAAGTCCTGCAGTTGCATCCACCACATCCGGCAAATAATCTCCTTTAATGCGCACCCCTTTCGCCACCGCCGCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAAt < 6:1370716/150‑1 (MQ=255) aaGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATc > 4:242231/1‑151 (MQ=255) aGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATc > 6:1149770/1‑150 (MQ=255) gCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATcaa < 8:140645/151‑1 (MQ=255) cAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATcaaca < 7:1532221/151‑1 (MQ=255) gTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACaaa < 4:1425645/151‑1 (MQ=255) cAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGAt < 2:283704/151‑1 (MQ=255) aaaGGCATCGCGCCCAAGTCCTGCAGTGGCCTCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGCCCACCGCCGAATTTGCGTCAGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATg > 2:1129240/1‑151 (MQ=255) aaaGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATg > 3:953811/1‑151 (MQ=255) aaGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATgc < 3:1381684/151‑1 (MQ=255) aTCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATgccgcc > 3:1290610/1‑150 (MQ=255) aTCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATgccgcc > 8:1621553/1‑150 (MQ=255) ggcgcCCAAGTCCTGCAGTGGCATCCACCTCATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACGACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAg < 6:827006/150‑1 (MQ=255) cgcgCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAg < 6:714736/151‑1 (MQ=255) gcgcCCAAGTCCTGCAGTGGCATCC‑CCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGtt < 1:1088131/151‑1 (MQ=255) gcCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGttt > 4:518815/1‑151 (MQ=255) gcCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGttt > 7:527297/1‑151 (MQ=255) cccAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGtttt < 8:1193307/151‑1 (MQ=255) aGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCt < 7:981952/151‑1 (MQ=255) aGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCt < 8:1108051/151‑1 (MQ=255) ccTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCtcat < 5:263277/151‑1 (MQ=255) cTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCtcatc > 7:809555/1‑151 (MQ=255) cTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCtcatc > 3:422861/1‑151 (MQ=255) gCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCAc < 6:495867/151‑1 (MQ=255) gCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCtcatc < 5:1472478/149‑1 (MQ=255) gCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCtcatc < 5:676699/149‑1 (MQ=255) gCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCAc > 3:376222/1‑151 (MQ=255) gCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCCCCAAGTTTTGGCtcatca < 4:382193/150‑1 (MQ=255) cAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACg < 3:212573/151‑1 (MQ=255) cAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACg > 4:751159/1‑151 (MQ=255) aGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGc > 7:1191284/1‑151 (MQ=255) gTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCt < 3:1069637/151‑1 (MQ=255) ggCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTg < 2:439007/151‑1 (MQ=255) gCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTgc > 2:962703/1‑151 (MQ=255) cATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTgcg < 6:1032148/151‑1 (MQ=255) ccaccaCATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCaa < 2:655086/151‑1 (MQ=255) ccaccaCATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCa > 5:1010486/1‑150 (MQ=255) caccacATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAAt > 1:223817/1‑151 (MQ=255) cacaTCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTcc < 4:86331/151‑1 (MQ=255) acaTCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCa < 5:572449/151‑1 (MQ=255) ccGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGAt < 2:494197/150‑1 (MQ=255) ccGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGAt < 8:54498/150‑1 (MQ=255) ccGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATg > 4:1222182/1‑151 (MQ=255) cAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTcc > 8:421746/1‑151 (MQ=255) cAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTcc > 5:804792/1‑151 (MQ=255) aaaTAATCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCg > 8:1332909/1‑151 (MQ=255) ataatCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGc > 2:1502396/1‑151 (MQ=255) ataatCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGc > 6:1536571/1‑151 (MQ=255) ataatCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGc < 1:1557327/151‑1 (MQ=255) tCGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGtt > 6:1456775/1‑150 (MQ=255) cGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTa > 6:30883/1‑150 (MQ=255) cGCCTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTa < 4:303708/150‑1 (MQ=255) ccTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTAac > 3:304070/1‑150 (MQ=255) cTTTAATGCCCACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTAacac > 4:666440/1‑151 (MQ=255) tttAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTAACAcc > 1:392114/1‑151 (MQ=255) aaTGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTAACACCAgc < 2:89474/151‑1 (MQ=255) tGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTAACACCAgcgc > 5:351273/1‑151 (MQ=255) cccACCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTAACACCAGCGcc > 5:1303910/1‑150 (MQ=255) aCCGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTAACACCAGCGCCATc > 5:447894/1‑150 (MQ=255) ccGCTTTCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGTGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTAACACCAGCGCCATCAg < 8:1553214/151‑1 (MQ=255) tttCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTAACACCAGCGCCATCAGGTTg > 7:1069325/1‑151 (MQ=255) ttCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTAACACCAGCGCCATCAGGtt < 3:1214132/149‑1 (MQ=255) ttCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTAACACCAGCGCCATCAGGtt < 3:838097/149‑1 (MQ=255) tCGCCACAGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTAACACCAGCGCCATCAGGTTGt < 2:60107/150‑1 (MQ=255) aCCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTAACACCAGCGCCATCAGGTTGTCTTCAt < 6:450319/151‑1 (MQ=255) cGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTAACACCAGCGCCATCAGGTTGTCTTCATCg > 1:702094/1‑151 (MQ=255) | GTCGAGTAGCGCGGCAACCACTGGATTACGCTCCAGCATCCGCACGCGGCAGCCGACTGAAGCCAGTACAAAGGCATCGCGCCCAAGTCCTGCAGTGGCATCCACCACATCCGGCAAATAATCGCCTTTAATGCCCACCGCTTTCGCCACCGCCTCACCGCGACCACCGCCGAATTTGCGTCGGTGCGCCATCGCTCCGCCAACAAAATCAACAAAGATGCCGCCAAGTTTTGGCTCATCACGCTTGCGCAATTCCAGATGTTCCGGCGTTAACACCAGCGCCATCAGGTTGTCTTCATCG > NC_000913/3642752‑3643052 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |