New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3653230NA (NA)308 (0.670) 179/298 1.2 53.1% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 4536146 = 272 (0.590)intergenic (+115/+468) yjhR/nanS pseudogene, helicase family; putative frameshift suppressor/9‑O‑acetyl N‑acetylneuraminic acid esterase

Only 100 of 815 total aligned reads displayed.

GCAATATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACT  >  NC_000913/4535996‑4536296
                                                                                                                                                      |                                                                                                                                                      
gCAATATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTAcc                                                                                                                                                        <  4:806510/151‑1 (MQ=255)
  cgggacaagaaaatctcttttctggtctgagggcgcttactgctgaattcactgtcggcgaaggtaagttgatgagtcatgatgaaccctgttcgatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTa                                                                                                                                                      <  3:228211‑M2/3‑1 (MQ=255)
  aaTATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGGAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAACTCTTATTGTTTACCt                                                                                                                                                       >  8:1529154/1‑150 (MQ=255)
         agaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAttt                                                                                                                                               >  5:1559990‑M2/142‑151 (MQ=255)
          gtaaatctcttttctggtctgacggcgcttactgctgaattcactctcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAtttt                                                                                                                                              <  1:210273‑M2/11‑1 (MQ=255)
          gTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAAggaaggt                                                                                                                                              <  2:1799771‑M2/151‑8 (MQ=255)
            aGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAAggaaggtgc                                                                                                                                            <  3:1306814‑M2/151‑10 (MQ=255)
            aGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTcc                                                                                                                                            <  3:1037804/151‑1 (MQ=255)
            aGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTc                                                                                                                                             >  3:45235/1‑150 (MQ=255)
               ccggATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCttt                                                                                                                                         >  6:1729848/3‑151 (MQ=255)
                      tctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAAt                                                                                                                                  >  6:51620‑M2/129‑151 (MQ=255)
                      tctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAAt                                                                                                                                  >  2:1476987‑M2/129‑151 (MQ=255)
                         ggtctgacggcgctgactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATgc                                                                                                                                <  4:25545‑M2/25‑1 (MQ=255)
                           cAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaa                                                                                                                              >  6:393853‑M2/1‑127 (MQ=255)
                           cAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGcc                                                                                                                             >  2:1654470/1‑151 (MQ=255)
                            aGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaat                                                                                                                            <  5:1180872‑M2/151‑26 (MQ=255)
                             tgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTg                                                                                                                           >  4:387499‑M2/122‑151 (MQ=255)
                                ttAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACATAATCATTTTCCTTTGCATAATGCGCATggg                                                                                                                         >  5:417807/1‑150 (MQ=255)
                                 ggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGAt                                                                                                                       <  6:71338‑M2/34‑1 (MQ=255)
                                  gcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGAtt                                                                                                                      <  4:1512687‑M2/35‑1 (MQ=255)
                                  aaaTGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGAtt                                                                                                                      >  7:1031875/1‑151 (MQ=255)
                                   aaTGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaattcttctc                                                                                                                     <  3:1431874‑M2/151‑33 (MQ=255)
                                      gtgATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAAt                                                                                                                   <  3:641759/150‑1 (MQ=255)
                                         atgaGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCg                                                                                                               <  2:930492/151‑1 (MQ=255)
                                           gaGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgact                                                                                                             <  4:1287525‑M2/151‑41 (MQ=255)
                                              ccGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTg                                                                                                           >  5:971554/1‑150 (MQ=255)
                                                gTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtc                                                                                                        <  4:50688‑M2/151‑46 (MQ=255)
                                                attcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcttatcagggacttgttcgcaccttccCTAATCATTTTCCTTTACATAATGCGCCTGGGATTAATGGCGGGTGCtt                                                                                                        >  3:1134639‑M2/103‑151 (MQ=255)
                                                attcactgtcggcgaaggtaaggtgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCtt                                                                                                        <  5:1118079‑M2/49‑1 (MQ=255)
                                                 ttcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCttt                                                                                                       >  1:685748‑M2/102‑151 (MQ=255)
                                                   cATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTa                                                                                                     <  2:295384/151‑1 (MQ=255)
                                                       gtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAgg                                                                                                   <  7:1380134‑M2/54‑1 (MQ=255)
                                                          cAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc                                                                                              <  8:30159‑M2/151‑56 (MQ=255)
                                                           aGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct                                                                                             <  6:1040784‑M2/151‑57 (MQ=255)
                                                           aGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATgaa                                                                                             <  6:158725/151‑1 (MQ=255)
                                                            cgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgtgcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATgaaa                                                                                            <  7:1503525‑M2/61‑1 (MQ=255)
                                                              aaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATgaaaga                                                                                          <  3:350411‑M2/63‑1 (MQ=255)
                                                                 agtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt                                                                                       <  7:1273748‑M2/151‑63 (MQ=255)
                                                                  gtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtt                                                                                      <  4:874534‑M2/151‑64 (MQ=255)
                                                                    aaaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATgc                                                                                    >  8:387440/1‑151 (MQ=255)
                                                                       gggCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc                                                                                 >  7:736563‑M2/1‑83 (MQ=255)
                                                                           atatTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgat                                                                             >  6:141657‑M2/1‑79 (MQ=255)
                                                                            actcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCaata                                                                            <  6:1268590‑M2/77‑1 (MQ=255)
                                                                             atTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattt                                                                           <  5:264644‑M2/151‑75 (MQ=255)
                                                                             atTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCaata                                                                            >  4:1108087/1‑150 (MQ=255)
                                                                                atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAataatat                                                                        >  3:749678‑M2/71‑151 (MQ=255)
                                                                                  aCCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAataatataa                                                                      <  6:1163271/151‑1 (MQ=255)
                                                                                  aCCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAataatata                                                                       <  7:419462/150‑1 (MQ=255)
                                                                                    cAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAataatttaat                                                                     >  1:1672321/1‑150 (MQ=255)
                                                                                    cAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAataatataat                                                                     >  8:1221480/1‑150 (MQ=255)
                                                                                     gaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATAtaataa                                                                   <  5:826156‑M2/86‑1 (MQ=255)
                                                                                        ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATgg                                                                <  7:284956‑M2/89‑1 (MQ=255)
                                                                                            gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTa                                                            <  2:1542171‑M2/93‑1 (MQ=255)
                                                                                                  atttCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGTGATTAATGGCGGGTGCTTTTAGTAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCt                                                      <  1:1235273/150‑1 (MQ=255)
                                                                                                      ccGTTTTACTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTg                                                   <  8:508477/150‑1 (MQ=255)
                                                                                                        gTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAAc                                                <  8:1755613/151‑1 (MQ=255)
                                                                                                        cagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAAc                                                <  8:1102013‑M2/105‑1 (MQ=255)
                                                                                                           ttATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcct                                              >  8:1028736‑M2/1‑47 (MQ=255)
                                                                                                           ttATTGCGAGTCGCCTCTCCTGATTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcct                                              >  4:1758585‑M2/1‑47 (MQ=255)
                                                                                                           atgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAAcat                                              <  7:927590‑M2/107‑1 (MQ=255)
                                                                                                             gacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAAcatcat                                           >  4:722947‑M2/42‑151 (MQ=255)
                                                                                                              acaaacatgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCAtt                                          <  5:1025088‑M2/111‑1 (MQ=255)
                                                                                                                gCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTaa                                        <  3:832832/151‑1 (MQ=255)
                                                                                                                    atgatctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCat                                    <  1:1493411‑M2/117‑1 (MQ=255)
                                                                                                                      cGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCatat                                  >  7:1790005/1‑151 (MQ=255)
                                                                                                                      cGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCatat                                  >  8:848609/1‑151 (MQ=255)
                                                                                                                      cGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCata                                   <  5:874464/150‑1 (MQ=255)
                                                                                                                        tctcatatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGAGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATatc                                 >  1:13734‑M2/31‑150 (MQ=255)
                                                                                                                        ccTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATatca                                <  7:1643852/151‑1 (MQ=255)
                                                                                                                           catatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGAATAATGAGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTATTTGAACATCTTTAAGCATatcatc                              >  5:1724573‑M2/28‑150 (MQ=255)
                                                                                                                            atatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATatcatcat                            >  1:345965‑M2/27‑151 (MQ=255)
                                                                                                                             tatcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATatcatcatc                           >  2:442477‑M2/26‑151 (MQ=255)
                                                                                                                              cTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCg                          >  5:1445955/1‑151 (MQ=255)
                                                                                                                              atcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATatcatcatc                           <  3:1217632‑M2/126‑1 (MQ=255)
                                                                                                                              atcagggacttgttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATatcatcatc                           <  2:1137952‑M2/126‑1 (MQ=255)
                                                                                                                               tGATTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc                          <  2:1388998‑M2/150‑124 (MQ=255)
                                                                                                                               tGATTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttgctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc                          <  1:84337‑M2/150‑124 (MQ=255)
                                                                                                                                 aTTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatt                       <  4:1420220‑M2/151‑127 (MQ=255)
                                                                                                                                 aTTATAAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatt                       <  3:1660269‑M2/151‑127 (MQ=255)
                                                                                                                                    ataAATCTTATTGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa                    >  5:1304533‑M2/1‑22 (MQ=255)
                                                                                                                                    ataAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTAt                     <  8:655973/150‑1 (MQ=255)
                                                                                                                                    ataAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTAt                     <  1:997080/150‑1 (MQ=255)
                                                                                                                                       aaTCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGc                 >  6:183018/1‑151 (MQ=255)
                                                                                                                                         gttcgcaccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCa               <  8:1370962‑M2/138‑1 (MQ=255)
                                                                                                                                          cTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTTCCac              >  4:1215890/1‑150 (MQ=255)
                                                                                                                                              ttGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcc          <  8:1446850‑M2/151‑140 (MQ=255)
                                                                                                                                              caccttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATc          >  1:100727‑M2/9‑151 (MQ=255)
                                                                                                                                               tGTTTACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc         <  2:650346‑M2/151‑141 (MQ=255)
                                                                                                                                               tGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGAGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGAATATCATCATCGTCTATTTGCCAGAAtac         >  1:1566783/1‑149 (MQ=255)
                                                                                                                                               accttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGTGTGCTTTTAGTAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATcc         <  3:1562587‑M2/144‑1 (MQ=255)
                                                                                                                                               accttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATcc         >  7:1140456‑M2/8‑151 (MQ=255)
                                                                                                                                                gTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATcc         <  6:877246/150‑1 (MQ=255)
                                                                                                                                                gTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCg        >  7:555415/1‑151 (MQ=255)
                                                                                                                                                 tttACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCg        <  3:920793/150‑1 (MQ=255)
                                                                                                                                                 cttccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGt       >  5:683306‑M2/6‑151 (MQ=255)
                                                                                                                                                  ttACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccca       >  2:1258549‑M2/1‑8 (MQ=255)
                                                                                                                                                   tccCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCg     >  2:783612‑M2/4‑151 (MQ=255)
                                                                                                                                                   tACCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccag      >  6:608198‑M2/1‑7 (MQ=255)
                                                                                                                                                    aCCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCg     >  2:517678/1‑150 (MQ=255)
                                                                                                                                                    aCCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCg     >  1:594300/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
GCAATATATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACT  >  NC_000913/4535996‑4536296

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.