BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,552,191	0	C	A	28.1%	819.1 / 107.6	437	intergenic (+200/+207)	fdnI/yddM	formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand): ref base C (94/211); new base A (94/25); total (200/237)
Fisher's exact test for biased strand distribution p-value = 1.92e-19
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 444 total aligned reads displayed.

CATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCAT  >  NC_000913/1552041‑1552340

 atatTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTc                                                                                                                                                       >  7:137584/1‑150 (MQ=31)

   atTGTAGACAAAGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGAATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCaa                                                                                                                                                     <  3:1030595/150‑1 (MQ=17)

      gTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATgg                                                                                                                                                 >  3:1332397/1‑151 (MQ=14)

             aCGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTa                                                                                                                                          <  2:115411/151‑1 (MQ=35)

             aCGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTGTGTCATCAGTTTCAAATGGCGCTGTa                                                                                                                                          <  1:1189079/151‑1 (MQ=25)

                 aGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaaaa                                                                                                                                       <  1:1794398/150‑1 (MQ=38)

                 aGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaaaa                                                                                                                                       <  7:833133/150‑1 (MQ=38)

                 aGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAg                                                                                                                                      <  1:1006553/151‑1 (MQ=39)

                     tttGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCgg                                                                                                                                  >  3:1793725/1‑150 (MQ=255)

                     tttGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGt                                                                                                                                  >  4:1023608/1‑151 (MQ=255)

                      ttGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCggc                                                                                                                                 >  2:1520614/1‑149 (MQ=255)

                      ttGTTCATGACGGATGCGTCGTGAACGCCTTATCATGCATGAAAAGGCTTCAAATGCTATATATTGCATTGAAAGTGTAGTCATGATAAGCGTATCTCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGc                                                                                                                                    <  5:294359/148‑1 (MQ=14)

                       tGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTc                                                                                                                                 <  4:1285373/150‑1 (MQ=255)

                       tGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTc                                                                                                                                 <  2:188407/150‑1 (MQ=255)

                        gTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCa                                                                                                                                <  4:1443005/150‑1 (MQ=255)

                        gTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCa                                                                                                                                <  3:600415/150‑1 (MQ=255)

                           cATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCAtttt                                                                                                                            >  2:1600822/1‑151 (MQ=255)

                           cATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCAtttt                                                                                                                            <  1:430209/151‑1 (MQ=255)

                            aTGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAgagctcatgttc                                                                                                                           >  5:1447922/1‑140 (MQ=255)

                                 ggATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGGCATTTTCATAtt                                                                                                                      >  7:895834/1‑151 (MQ=255)

                                  gATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGGGTCATTTTAATATTg                                                                                                                     >  7:1556409/1‑151 (MQ=255)

                                     gcggcgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTa                                                                                                                   <  7:376033/150‑1 (MQ=255)

                                       ggcgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTTTAAAACGAGACATTTTAATATTgatta                                                                                                                 >  5:443873/1‑146 (MQ=11)

                                       ggcgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGACAATGTTGCGTTTGTCATGAGTTTAAAATTGATCTGTAAAAGGCGTCATTATCTTATTGTAGa                                                                                                                 >  4:1554750/1‑150 (MQ=14)

                                        gcgTGAACGCCTTATCCTGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACa                                                                                                               <  4:767148/151‑1 (MQ=255)

                                        gcgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAACGGCGTCATTTTCATATTGTAGACa                                                                                                               <  8:426572/151‑1 (MQ=255)

                                        gcgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACa                                                                                                               <  2:582948/151‑1 (MQ=255)

                                         cgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTGAAATGGCGCTGTATAAGGCGTCATTTTCATATTGTAGACa                                                                                                               >  3:404350/1‑150 (MQ=255)

                                          gTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAAc                                                                                                             <  3:1097635/151‑1 (MQ=255)

                                          gTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAAGAGTCATTTTAATATTGTataaaa                                                                                                              >  1:1589744/1‑145 (MQ=14)

                                                        cgtcATGAAAATCCTTCATATCCAATATATTGCAGTTAACGTGTAGTCATGATAATGGTATCTAATCATTCAATGTTTCTTTTCTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCa                                                                                               <  5:970856/148‑1 (MQ=18)

                                                          gCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATg                                                                                             <  3:1466568/151‑1 (MQ=255)

                                                           cATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGc                                                                                            <  2:982266/151‑1 (MQ=255)

                                                           aaTGAAAACCCTTCAAATCCATTAGATTGCAGTGTACGTTTAGTCATGATATGCGTAGGGAATCAGTCAATGTTGTGTTTGTGATCAGTTTCAAATGGCGCTGTAAAAGGCGTCTTTTTCATATTGTAGACAACGTAGGCTTTGTTCATg                                                                                             <  4:645326/149‑1 (MQ=25)

                                                            aTGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTTATAAGCTTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGcc                                                                                           <  5:1375518/151‑1 (MQ=255)

                                                              taaaaCCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCATTCAATGTTGATTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCg                                                                                          <  7:1689995/149‑1 (MQ=255)

                                                              gAAAACCCTTCAAATCCAATAGATTGCAGTGTTCTTTTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATTGCGTTGTAATAGGAGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCgg                                                                                         <  5:1098933/151‑1 (MQ=21)

                                                              gAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTTTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCg                                                                                          <  5:1495161/150‑1 (MQ=255)

                                                                  aCCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTTTAAAAAGAGACATTTTAATATTGTATACAAAGAAGGATTTGTTAATGCCGTATgc                                                                                     >  5:756774/1‑151 (MQ=14)

                                                                    ccTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATgcgg                                                                                   <  4:1612698/151‑1 (MQ=255)

                                                                       tCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCTTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATgcggcg                                                                                 <  6:866068/150‑1 (MQ=255)

                                                                       tCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATgcggc                                                                                  <  4:1116867/149‑1 (MQ=255)

                                                                       tCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTATAACGCGTCATTTTCTTATTGTAGAAAAAGTAGGCTTTGTTCATGCAGGATGCGGCGt                                                                                >  3:1374256/1‑151 (MQ=18)

                                                                        cAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGTCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTg                                                                               <  6:320329/151‑1 (MQ=255)

                                                                        cAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCGTCAGTTTCAAATGGCGCTGTAAATGGCGTCATTTTAATATTGTAGACAACGTAGGCTTTGTTAATCCCGGATGCGGCGTg                                                                               >  2:1470130/1‑151 (MQ=255)

                                                                        cAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTATAAAAAGCGACAATTTCATATTGTAGAGAAAGTAGACTTTGTTCATGACGGATGCGGCGtt                                                                               >  4:1384920/1‑150 (MQ=18)

                                                                         aaaTCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTATACAACGTAGGCTTTGTTCATGCCCGATgcggcg                                                                                 >  3:1226765/1‑148 (MQ=255)

                                                                         aaaTCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTGTGTCATCAGTTTCAAATGGCGCGGTATAAGGCGTCAGTTTCATATTGTAGACAAAGTAGGCTTTGTTCATGCCGGATGCGGCGTgc                                                                              >  2:50406/1‑150 (MQ=255)

                                                                            tCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACACAGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACg                                                                           >  7:1597826/1‑151 (MQ=255)

                                                                            tCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTATAAATGGCGCTTTAAAAGGAGGCATTTTATTATTGTAGACAACGTCGGCTTACTTCATCCCGCATGCGGGGTGAACg                                                                           >  8:1121704/1‑151 (MQ=14)

                                                                             ccAATAGATTGCATTGAACGTGTAGGCCTGATAATCGTAGCTCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGc                                                                          <  6:267814/151‑1 (MQ=255)

                                                                               aaTAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTGTAAAAGGAGGCATTTTGTTATTGAAGGAAACGTAGACATTGTTCATGCCGAATGCGGGGTGatagggt                                                                        >  1:571415/1‑145 (MQ=17)

                                                                                aTAGATTGCAGTGAACGTGTAGTCCTGATAAGCGTAGCGCATCAGTCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCtt                                                                       <  6:1447471/151‑1 (MQ=255)

                                                                                aTAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCtt                                                                       <  8:574772/151‑1 (MQ=255)

                                                                                  aGATTGCAGTGACCGTGTAGGCCTGATCAGCGTAGCGCAGCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTa                                                                      <  8:1244444/150‑1 (MQ=255)

                                                                                    agtGCAGTGACCGGGGAGGCCTGATACGCGGAGCGCAGCAGGCAATGGTGCGCTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATcc                                                                   <  7:1195134/149‑1 (MQ=18)

                                                                                      tGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTGATATTGTATACAACGTAGGCTTTGTTCATCCCGGATGAGGCGTGAACGCCTTATCCgg                                                                 >  8:812146/1‑151 (MQ=255)

                                                                                       gCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCgg                                                                 <  1:7798/150‑1 (MQ=255)

                                                                                         aGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCAt                                                              >  7:1016333/1‑151 (MQ=255)

                                                                                         aGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAAGAGTCATTTTAATATTGAAGAAAACGTAGGCTTTCTTCATACCGGATCCGAAGTGAAAGCCTTATCCgaaa                                                               >  1:865624/1‑147 (MQ=18)

                                                                                         aGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGGCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCAt                                                              <  2:1045744/151‑1 (MQ=255)

                                                                                            gAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGTCGTGAAAGCCTTATNAGGAATGa                                                            >  4:500680/1‑150 (MQ=255)

                                                                                            gAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGa                                                            <  6:1646409/150‑1 (MQ=255)

                                                                                             aaCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTGATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGaa                                                           >  8:1037719/1‑150 (MQ=255)

                                                                                              aCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGaaaa                                                         <  6:1311353/151‑1 (MQ=255)

                                                                                                 tgtAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTGAAATGGCGCTGTAAAAGGGGGCATTTTAATATTGTAGACAACGTAGGCTTTGTTCATGCCGCATGCGGCGTGATCGGCTTATGCGGCATGAacacgc                                                      >  8:1565699/1‑149 (MQ=21)

                                                                                                 tgtAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGAGAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTCGCCGGCATGAAAAccc                                                      >  3:1549140/1‑151 (MQ=255)

                                                                                                     ggCCTGATAAGCGTAGCGCATCAGGCAATCTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAACCCGTCATTTTCATATTGTAGACAAAGAAGGCTTTGTTCATGCAGGATCAGGCGTGAACCACTAATCCCGCAACAAAACCCtta                                                   >  6:559284/1‑149 (MQ=21)

                                                                                                        cTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAAt                                               >  8:216131/1‑151 (MQ=255)

                                                                                                         tGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGACAACCCTTCAAATc                                              >  2:1732228/1‑151 (MQ=255)

                                                                                                               gCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTATAAGGGGACATTTTCATTTTGTATACAACGTAGGCATTCTTAATGCACGATTCGGCGTGAAAGCCATATCCGGGATTAAAACAATTAAAATCCAAt                                          >  3:680308/1‑149 (MQ=18)

                                                                                                                cGTATCTCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAACGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGa                                       <  7:1493845/151‑1 (MQ=255)

                                                                                                                cGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCCGCGTTAAAGACTTATACGGAATGAAAACCCTTATAATCCAATac                                        >  5:1578359/1‑149 (MQ=18)

                                                                                                                    gcgcATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGc                                   <  5:1054144/151‑1 (MQ=255)

                                                                                                                      gcATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGAGTTAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGc                                   >  7:1775792/1‑149 (MQ=255)

                                                                                                                      gcATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAACGCGTCATTTTCATATTGTAGACAACGAAGGCTTAGTTCATCCCCCAAGCGGCGTTAACGCCTTAAACCCCATCAAAACCCTTCAAAACCAATACAtacc                                   >  6:532851/1‑146 (MQ=17)

                                                                                                                          cAGGCAATGTTGCGTTTGTCATAAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGa                              <  2:840829/150‑1 (MQ=255)

                                                                                                                           atgCAATGTTTCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAAc                            <  4:282473/149‑1 (MQ=255)

                                                                                                                             gCAATGTTGCGTTAGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgt                          <  8:1677332/151‑1 (MQ=255)

                                                                                                                               aaTGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAAAGACTTATACGGCATGAAAACCCTTAAAATCCAATAGATTGCAGTGAACgtgt                        >  1:1291548/1‑151 (MQ=255)

                                                                                                                                aTGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgtgt                        >  3:281609/1‑150 (MQ=255)

                                                                                                                                  gttttttttttgataaGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAg                      <  5:577688/135‑1 (MQ=11)

                                                                                                                                  gTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATACATTGCAGTGAACGTGTAgg                     >  6:106820/1‑151 (MQ=255)

                                                                                                                                  gTTGCGTTTGGGATCAGGTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAg                      <  7:614919/150‑1 (MQ=255)

                                                                                                                                   ttGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGc                    >  3:936405/1‑151 (MQ=255)

                                                                                                                                    tGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGcc                   >  5:1258428/1‑151 (MQ=255)

                                                                                                                                    tGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGc                    <  2:1660186/150‑1 (MQ=255)

                                                                                                                                      tttttATCATAAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCt                  <  5:1690085/148‑1 (MQ=255)

                                                                                                                                       gTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTg                 >  1:243736/1‑150 (MQ=255)

                                                                                                                                          tGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATa              >  1:638989/1‑150 (MQ=255)

                                                                                                                                             catcaGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGAGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAg            >  8:732867/1‑149 (MQ=255)

                                                                                                                                             catcaGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGc           <  8:131090/150‑1 (MQ=25)

                                                                                                                                              atcaGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGt         <  1:1486755/151‑1 (MQ=38)

                                                                                                                                              ataaGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGt         <  3:847895/148‑1 (MQ=17)

                                                                                                                                               gcaGTTTCACATGGCGCGGTAACTGGCGTGATTTTCATATTGTAGAGAAGGTATGCTTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTa        <  8:283137/150‑1 (MQ=11)

                                                                                                                                                 aGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAgc      >  5:882672/1‑151 (MQ=35)

                                                                                                                                                   tttCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAgcgc    >  8:1253759/1‑151 (MQ=34)

                                                                                                                                                    ttCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAgcgc    >  4:891229/1‑150 (MQ=33)

                                                                                                                                                     tCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCAt  >  7:281360/1‑151 (MQ=33)

                                                                                                                                                      cAAATGGAGAGGTAAAAGGCGTCATTATCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCAt  <  2:278000/150‑1 (MQ=255)

CATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCAT  >  NC_000913/1552041‑1552340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`