Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,8050TA26.3% 122.3 / 37.3 145R629R (CGT→CGA) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base T (51/36);  new base A (30/1);  total (96/49)
Fisher's exact test for biased strand distribution p-value = 2.83e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 147 total aligned reads displayed.

ACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG  >  NC_000913/1708655‑1708955
                                                                                                                                                      |                                                                                                                                                       
cccAGAACACCAGGTGGATCCGCGCAAAGCCGCCGTCGAAGCAGCTATTGCCCGGGCCAAAGCGCGCAAGCTGGAACACCAACAGGCTAATGTGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGt                                                                                                                                                         <  8:370759/150‑1 (MQ=11)
 ccAGCACCACAGGGCGATCCTCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTg                                                                                                                                                        <  2:1300314/151‑1 (MQ=255)
     aacaacAGTTCGATCCTCTCAAAGCCTCCTTCTATGCCTTTATATCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCa                                                                                                                                                     <  6:875989/150‑1 (MQ=14)
          catgtagATCCTCGGAAAACTGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGGCGATCCGCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CAc                                                                                                                                              <  3:1408734/145‑1 (MQ=11)
               cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAAGACCATCCTCGCACAGAAGCCGGAGAATCAGCTAGTGCACGAGCCAAAG‑CACGCaa                                                                                                                                          >  6:586632/1‑150 (MQ=11)
                 aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTGGATCCGCGCAAAGCGGCAGTAGCCGCCGCTATTGCCCGCGCGAACG‑ccaacaaacc                                                                                                                                       >  7:685031/1‑142 (MQ=11)
                     ccgcaaatcttcagTCGAACCCGCTAGGGCCCGCGCCAAAGCGCGAAAGCTGGACCAGCAACACGCTACTGCTGAACAACAACAACAGGGCGATCCCCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGaa                                                                                                                                   <  3:387431/138‑1 (MQ=2)
                      gcaaattgtgccgTAGAAGCACCTATTTCCCGTGCCTAATCGCGGAAGCTGGAACAGCTACAGGCTACTTCGGAAGCAGAAGAACTGGGCGATCCTCGCAAATCCGCCGTCGAAGCAGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGa                                                                                                                                    <  5:1675290/140‑1 (MQ=11)
                      cgcAAACCTGCCGGAGAAGCAGCTATTTCACGGGCCAAACGGGGCAAGCTGGAACACCAACAGGATACTCCGGAAGCAGCACCCCAGGCCGATCCCCGCAAACCCGCCGTCGAAGCAGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAAc                                                                                                                                  <  3:164739/151‑1 (MQ=12)
                         caaccccgcggcGAAGCCGCTATCGCCCGCGCCAAATCTCGCAAGCTGCAACAGCAACAGGCTAATGCGGAAGCACAAGCACAGGTCGATCCGCGCAAAGCCCCCTTCGAAGCAGCTATTGCCCGTGCCAAAG‑CTCGCAAGCTGGAACAGc                                                                                                                               <  2:750983/140‑1 (MQ=11)
                         aaatctgcaggagAAGCCGCTATAGCCCGTGCCATCGCGCGCAAGCTGGTAACCCCACTGCCCTATGGTGAACCAGAACCCCAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAg                                                                                                                                <  8:760802/138‑1 (MQ=2)
                            cccgccgGCGAAGCCGCTATTCCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAAc                                                                                                                            <  8:584828/150‑1 (MQ=255)
                             ctgccgTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGACAAAGCAAGAAATTCCAGTACCAAAA‑CACTCAAGCAGAAACAggacc                                                                                                                            >  1:1259401/3‑146 (MQ=14)
                              cgccgTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGAAGAACAGGTAGATCCGCGCAAAGCGGCCGTAGAAGCCTAGATGGCCCGTGGGAACG‑CCCGGCAGCTGGagcggggccgg                                                                                                                          >  3:1242118/1‑141 (MQ=11)
                              cgccgGCGACGCCGCTATTGCCTTTTTAAATGCTCGGAAGCGGGAACAGATATAGCCTAATGCGTACACTGTTTAACTCGTCGATGCTCTTAATTTCTCCGTCGAAGCGGCTATTGCACGCGCCAAAG‑CACGCAAGCTGGAACAGCAACAg                                                                                                                          <  6:1278480/151‑1 (MQ=2)
                                ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTTCTGCGGAGCCAGCGGCTCAGCTCGATGCCCGGGAAGCTCCCGGCGATGCCGGGATGGCCCGGGACAAAG‑AACGCCAGCgggcggcgcgcccggg                                                                                                                        >  8:1280902/1‑138 (MQ=2)
                                 cgTCGAAGCAGCTATTCCCCGGGCCAAACCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCt                                                                                                                       <  2:2175/151‑1 (MQ=255)
                                  gggcaaGCCGCTATTGCCCGTTCCAACGCGAGCAAGCTGGACCAGCTACAGGCTTCTGAGGATCCAGCAGAACTGGTCTATTCGCGCATAACGGCCGTCGAAGCCGCTATAGCCCGGGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTa                                                                                                                      <  2:517912/147‑1 (MQ=9)
                                  gTCGAAGCTGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGAAACAGTCTAATGCGGAAACAGAAGAACAGGTGGATCAGCGCAAAGCTGCCGTCGAAGCCGCTATTGAACGAGCCAAAG‑CACGCAAGCAggtcggtcgagcggcgg                                                                                                                      >  4:1570260/1‑136 (MQ=14)
                                  gTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAGCACGCTAAAGCGGCGGCAAAAGAAAAGGTGTATCATAGCAAGGAGGACTTCGAAGACGCTATTGCACTATAAAAAG‑CACGCAAGCTggcgccgcagggggggt                                                                                                                      >  5:412626/1‑136 (MQ=2)
                                    cgcaGCCGCTATTTCCCGTCACAAAGCCCTCCTCATAGAACAGCCACTGTCTTCTGCGGAGCGACTAGCTGAGGTCTTGCCGGGTAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTa                                                                                                                      <  2:528955/146‑1 (MQ=2)
                                     gAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGCTCCAGAAGAACAGGTCGATCCGCGCAAAGCGGCCGGCGAAGCGGCTATTGCACGAGCCAACG‑CGCGCAAGCTGGAGCAggagcgggcgaggg                                                                                                                   >  2:615546/1‑138 (MQ=11)
                                      aaGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAAGATCCTAAGAGCATCGAGTACGTCAAAGCGGGTATTTACCGTGGAAAAG‑CACGGAAGCTGCAACAGCAAAAGAATAATGc                                                                                                                  >  4:1376634/1‑151 (MQ=9)
                                      aaGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATACATAGCAAGAACAACATGTAGATAAACGCAAATCGAAAGTCTAAACCGCTATTGCCAGGGCCAAAG‑AAATAAAAAAAGAACAGCAGCAGGCTCATgg                                                                                                                  >  1:1257191/1‑150 (MQ=2)
                                           gCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGAAGAACAGGTAGATCCGCGCAAAGCGGCCGTAGACGCGGCTATTGCCCGAGCCCACG‑CACCAAAACCCGACCAGCACCAGGATCATCCCGAGc                                                                                                             >  2:1450955/1‑151 (MQ=11)
                                                cgCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGCAGCGGCTATTGCCCGAGCGAAAG‑CCAACAACCACGACCAGCACAAGGATAAAACCGAGCCAGa                                                                                                         >  4:1713589/2‑150 (MQ=2)
                                                 ccccgggccacctcgcgcAAGCTGGAACACCACCAGCCTACTCCGGAACCAGAACACGAGGGCGATCCCCGCAAACCAGCCGTCGAAGCAGCTATTGCCCGGGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGaa                                                                                                        <  6:1406671/137‑1 (MQ=11)
                                                    cgggaataaactcgcAATCTGGAACAACTACAGGATAATTAGGAACCAGAACCCGTGGCTGATCCTCGTAAATCTGCCGTTGAAGCAGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGaacaac                                                                                                    <  5:1441275/139‑1 (MQ=2)
                                                    cggcaccccacccgcAATCAGGAACACCAACAGCCTACTCCCGAACCAGCACCCCAGGCCGATCCCCGCAAACCCGCCGTCGAAGCCGCTATCGCCCGCGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGaacaac                                                                                                    <  3:165293/139‑1 (MQ=2)
                                                     gtgaaaaatctcgcAAGCTGGAAGATCATCAGGATAATACGGAAGCAGAATAACTTGCCGATCCTCGCAAAGCGGCCGTTGAAGCAGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAacaaca                                                                                                   <  6:1705092/140‑1 (MQ=14)
                                                       gaataatgtgggaatcTGGAAGATCTACAGGATACTTAGGAAGCAGAATAAGAGGTTGATCCTCGTAAATCTGCCGTCGAAGCAGCTATTGCCCGTGCCAAAG‑CTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAgg                                                                                                 <  1:1132991/136‑1 (MQ=2)
                                                         cAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGAAGAACAGGACCAACCAAGCAAATCCGCCATCGAAACCGATATTGCAAGTGACAACGACAC‑CAAGCTGGCCCAGAAACAATCAAAAACAGAGCCAGAAGAACAgggg                                                                                               >  4:723649/1‑149 (MQ=2)
                                                         cAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTAGATCCGCGAAAAGCCGCCGTCGAAGACGCTATTGCACGAGCCAAAG‑CACGCAAGCTCGAACAGCAACCGGCTAATGCAGAGCCAGAAGAACAGGtg                                                                                               >  4:90932/1‑150 (MQ=11)
                                                         cAAAGCGCGCAAGCTGGAACAGCAACAGGATAATGCGGAACCAGAACAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTc                                                                                               <  2:402461/151‑1 (MQ=255)
                                                               gggcAAGCAGGAACACCTACAGCAAAATCCCGAAGCAGAACCAGAGGGCGATCCTCGCAAACCCGCCGTCGAAGCAGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCcg                                                                                         <  7:1666448/149‑1 (MQ=11)
                                                               gcgcAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTGGATCCGCGCAAAGCCGCCGTGGCCGCCGCTATTGCCCGCGCGAACG‑CCCGAAACCGCGCCCAGCACCAGGGTCTAGACGAGCCAGaactccacgtctcacgc                                                                                         >  8:814415/1‑137 (MQ=2)
                                                                 gcAAGCTGGAACAGCATCAGGATAATTCGGACGCAGCACACGATGTCGATCCGCGGAAATCCGCCGTCGAAGCAGCTATTGCCCGGGCCAAAG‑CCCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCcgcg                                                                                       <  7:571059/151‑1 (MQ=11)
                                                                    aGCTGGAAGAGCTTCAGGATAATTCGGAACCAGAACACGTTGGCGATCCGCGCAAATCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCaa                                                                                    <  4:385610/151‑1 (MQ=11)
                                                                    aGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCAAAAG‑CCAAAAAACCCGAACAGCAAAAGGATAAAAACGAGCAATAaaaacaattaaaaaaaacaa                                                                                     >  1:1667730/1‑136 (MQ=2)
                                                                        ggAACAGCAACAGGCTAATGCGGAACCAGAAGACCAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAg                                                                                  <  2:1318523/149‑1 (MQ=255)
                                                                        ggAACACCAACAGGATACTCCGGAAGCAGCAACAGTTGGCGATCCACGGAAAGCGGCCGTCGAAGCAGCTATTGCCCGTGCCAAAG‑CCCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAgc                                                                                 <  3:101428/150‑1 (MQ=11)
                                                                                  caggataattacgAACCAGAATAAGTTGTAGATCCTCGTAAATCTGCCGTTGAAGCAGCTATTGCCCGTGCCAAAG‑CTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGaa                                                                       <  1:1803852/138‑1 (MQ=11)
                                                                                  cAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCAAATGACGAGCCAGAACAACAGGACGATCCGCGCAAAGCCGCCGTCGa                                                                        >  4:64773/1‑149 (MQ=255)
                                                                                        aaTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCGGCAGTCGACGCGGCTATTGCCCGAGCCAACG‑CAAGAAACCAGGCACAGCAGAAGGGTAATGACGAGCCAGAACTCCACGTCGATACGCGCAGAGCCGCCGTCTCAGCGGCtt                                                                >  2:1303687/1‑150 (MQ=9)
                                                                                         aTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACG‑CACGAAAGCGGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCCCCCACAGCCGCAGTTGACGAGGCTAt                                                               >  3:1244669/1‑151 (MQ=14)
                                                                                          tGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCACGAGCCAAAG‑CACGCAAGCTGGAACAACAACCGAATAAAGCCTATACAGAAAAACAGTACGATACGCTCAAAAACTCCGTCGAAGCCGATaa                                                               >  5:942867/1‑149 (MQ=2)
                                                                                             ggaagcagcaaccgaGGGCGATCCGCGCAAACCTGCCGTGGAAGCAGCTATTGCCCGTGCCAAAG‑CCCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGcc                                                           <  3:311155/137‑1 (MQ=11)
                                                                                                aCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCGAAGG‑CAAGAAAGCGCGCACAGCACCAGGGTGATGCAGATCCAGAGCCACAGCGTGATCCGGCCACAGCCCCCGAGGAAGCGGCTATTGccggc                                                        >  8:1222208/1‑148 (MQ=2)
                                                                                                aCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGGGCCAAAG‑CCCACAACCAGGCCCAGCAACACGCTAATGCCCACGCAGGACAACAGGTCCAAACCCGCAAAGCCGCAGTCGCAGCGGGTATTGCACg                                                         >  3:817828/1‑150 (MQ=2)
                                                                                                   agaagaACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCGGCTATTGCCCGCGcc                                                     >  2:998971/1‑151 (MQ=255)
                                                                                                   agaagaACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGcc                                                     >  2:106468/1‑151 (MQ=255)
                                                                                                      accccttggcGATCCCCGCAAATCAGCCGTGGAAGCAGCTATGGCCCGCGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCaaa                                                  <  7:1637709/142‑1 (MQ=11)
                                                                                                        aaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGAGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGATCCAGAACAACAGGGTGATCCGCGCAAAGCGGCCGTCGACGCGGCTATTGCCCgcgcgcgggc                                                >  2:746165/1‑145 (MQ=11)
                                                                                                        aaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAACG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTCGCCGCCGCTATTGCCCgcgcgcacgc                                                >  8:229499/1‑145 (MQ=14)
                                                                                                        aaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGCAGCCGCTATTGCCCGAGCGAAGgc                                                >  2:672222/1‑151 (MQ=255)
                                                                                                          cAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACACCAGGTCGATCCGCGCAAAGCCGCCGTTGCCGCGGCTATTGCCCGCGCCAAGgccc                                              >  2:1820675/1‑149 (MQ=14)
                                                                                                          cAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAACCAGAACAACAGGTTGATCCGCGCAAAACCGACGTCGAAGCAGATATTGAACGAGACAAAgcac                                              >  4:602749/1‑149 (MQ=11)
                                                                                                          cAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCCAAAG‑CAAGAAACCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGCTAGATCCGCGCAAAGCGGCCGTATAAGCGGCTATTGCCCGCGCGAACgccc                                              >  5:692348/1‑149 (MQ=11)
                                                                                                           aGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCGAAAG‑CACGCAAGCGCGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGCTCCGCGCAAAGCCGCAGTGCCAGCGGCGATTGCCCGCGCAAAcgcg                                               >  8:344440/1‑149 (MQ=14)
                                                                                                           aGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CCCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACACCAGGTCGATCCGCGCAAAGCCGCAGTAGCCGCCGCTATTGCCCGCGCCAAAgcgcg                                             >  7:1750488/1‑151 (MQ=14)
                                                                                                               cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGCGCCAATGCCCGCaac                                         >  8:577426/1‑150 (MQ=255)
                                                                                                               cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCGAAGgcgacgatc                                         >  6:533511/1‑145 (MQ=14)
                                                                                                                gATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGCGCCAAAG‑CAAGCAAGCTGGAACAGCAAAAGGCTAATGACGAGCCAGAAGAACAGGTCGATCAGCGCAAAGCCGCACTAGAACCCGCTATTGCACGAGCCAACgcaatcaaac                                        >  2:1524373/1‑143 (MQ=11)
                                                                                                                gATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCCGCGGCTATTGCCCGCGCCAAGGCGATCAAAc                                        >  7:1756281/1‑151 (MQ=14)
                                                                                                                gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAACG‑CACGCAAGCTGGAACAGCACCAGGCTAATGCCGTCCCAGAACAACAGGTTGATCCGCGCCAAGCCGCCGTCGCCGCGGCTATTGCCCGCGCGCCGGCGCGCaacc                                        >  3:183703/1‑149 (MQ=11)
                                                                                                                gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGGTAATGCCGAGCCAGAACAACAGGTCGCTCCGCGCAAAGCCGCAGTGGCAGCCGCTATTGCCCGCGCGAAGgccaacaaac                                        >  7:1219944/1‑143 (MQ=14)
                                                                                                                    cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CGCGCAGGGGGGAACAGCACCCGGCTGATCGCGAGGCAGATGAACCGGTCGATCCGCGCGTCGCCGCCGTCGAAGCCGCTATTGCCCGGGCCCCCgcgcgcgggggggg                                    >  3:1416114/1‑143 (MQ=0)
                                                                                                                    cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGATCCAGAACAACAGGTGGATCCGCGCAAAGCCGCCGTGGCAGCCGCTATTGCCCGAGCGAAGgccaacaaaccggc                                    >  8:1090526/1‑139 (MQ=14)
                                                                                                                      cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCGGCTATTGCCCGCGCCCAAGCGAGCAAACGCGAAc                                  >  2:237957/1‑151 (MQ=14)
                                                                                                                       gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CAAGCAATCTGGAACAGCAACAGGCTAATGCAGAGCAAGAAGAAAAGGTAGATCCGCGCAAAGATGAAGTCGAAGAAGCTATTGCCCGAGCCAAAGGGGGCGAAgggggtcg                                 >  5:627433/1‑147 (MQ=11)
                                                                                                                        cAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCAACTGAAGAGCCACAACAACAGGTAGATCCGAGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGAAAGCAAACGGGAAc                                  >  6:855996/1‑149 (MQ=14)
                                                                                                                         aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTGGCAGCCGCTATTGCCCGCGCGCAGGCCCGCAAACGGGCACAGc                               >  3:273598/1‑151 (MQ=14)
                                                                                                                         aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCAGTAGCAGCGGCTATTGCCCGAGCCAAAGCCAGAAAACGCGAACAGc                               >  8:1039839/1‑151 (MQ=14)
                                                                                                                           aGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGAAACCGGCAAATGCCGAGGCAGCACAACAGGGCTCTCCGCGCAAAGGAGCCGTCGAAGCGGCTATTGAACGAGCCAAAGCGCGCACGCGGGATCAGctc                             >  8:1585720/1‑149 (MQ=14)
                                                                                                                              cgccgcCGACCCCGCTATCGCCCGCGCCAAAT‑TTCTCAAGGTGTAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTTTACCCTCGAATAGGCGCTTGCGATGCAGCTATCGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCg                          <  4:942475/151‑1 (MQ=255)
                                                                                                                              cgccgTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCg                          <  2:64910/151‑1 (MQ=255)
                                                                                                                               gccgTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCAAAAGCGCGAAAACGGGAACAGCaaaagg                         >  6:1184710/1‑147 (MQ=255)
                                                                                                                                 cgTCGAAGCCTCTATTGACGGTGCCAACG‑CAAGAACCCTGCAACAGCACCCTGGTCAGGGCTACCGTGATCAACAGCGCTATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCt                       <  2:1390143/151‑1 (MQ=9)
                                                                                                                                  gttgAAGCAGCTATCGCCCGCGCCAAAG‑CGCGCAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGAAGAACAGGTAGATCCGCGCGAACCCGACCGCGCAGCCCGGATGGCCCGTGCCCACGAGCGCACTCGGGAGCCGCCAGCGGCtt                      >  7:1454715/4‑150 (MQ=2)
                                                                                                                                  gTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCGGCTATTGCCCGCGCCGACGCGAGCAAACCGGCACAGCACCAGGCt                       >  3:1429486/1‑150 (MQ=14)
                                                                                                                                   tCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCGCGCAAACGGGAACAGCAACCGGCTa                      >  8:1795908/1‑150 (MQ=255)
                                                                                                                                    cGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTGGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCACGAGCCAAACCACCCGAACAGGACCAGCAAcagcgga                      >  8:208076/1‑143 (MQ=11)
                                                                                                                                     gAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCCTCGACGAAGCTATTCCCCGAGCCCAAGCGCGCACTCCGGAACAGCACCAGGCGAATg                   >  3:377908/1‑151 (MQ=14)
                                                                                                                                      aaGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCGAAAGCGCGCAAACGGGACCAGCAACCGGCTAATGc                  >  1:218480/1‑151 (MQ=255)
                                                                                                                                      aaGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGAGAAGGCAGAAGAGAAGTTTTATCATAGAAAAGACGAATTCGAAGAGCATATTGCCCTAGCCAAATCAATAAAAAAGGAACAGCAACCGGCTAATgg                  >  6:1632519/1‑150 (MQ=2)
                                                                                                                                        gCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCGGTCGAAGAAGCTATTGCGCGAGCGAAGGCGCGGAAACGGGAACAGCAACCGGCTAATGCgg                >  4:1617260/1‑151 (MQ=14)
                                                                                                                                        gCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAACCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCAAAAAAACCCGAACAGCaaaaggataaaaacg                >  4:1391218/1‑138 (MQ=11)
                                                                                                                                          cGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCGAACGCGCGCAACCGGGACCAGCAGCCGGCTAATCCgg                >  3:884613/1‑149 (MQ=14)
                                                                                                                                           gCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCCGTAGACGCCGCTATTGCCCGCGCCAAAGCCCGCAAACCCGACCAGCACCAGGCTAATGACGAGc             >  4:1056591/1‑151 (MQ=11)
                                                                                                                                           gCTATTGACCTTGACAAAG‑CTCGCAAGCTGGAACAGCATCAGGCTAATGCCGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGc             <  2:1017743/151‑1 (MQ=14)
                                                                                                                                            cTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTGGCCGCGGCTAATGCCCGCGCGCACGCCCGCAAAGGCGAACAGCACCAGGCTAATCCCGAggc            >  4:1741525/1‑149 (MQ=14)
                                                                                                                                             tATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCGGCTATTGCCCGCGCCCAAGCCCGCAAACGCGCCCAGCACCAGGCTAAAGCGGAGca            >  1:1770270/1‑149 (MQ=14)
                                                                                                                                              aTTGCCCTTTCCAAAG‑CTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCTCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGcc            <  4:401375/149‑1 (MQ=255)
                                                                                                                                                tGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGACCAGCACCCGGCTAATGCGGAGCCaga         >  8:416580/1‑150 (MQ=255)
                                                                                                                                                tGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGACGCCGCTATTGCCCGCGCACAAGCCCACAACCCCGCACAGCACCAGGATAAtacccaaacaga         >  5:830018/1‑139 (MQ=2)
                                                                                                                                                cgCCCGCGCCAAAG‑CGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCACGAGCCAAAGCGCGCAAGCTGGGAGAGGAAGCGGCGACGGCGGaccgcg          >  7:387146/2‑144 (MQ=11)
                                                                                                                                                 gCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCCAACGCCCGAAAACCCGACCAGCAGCCGGATAAAGCGGAGCCaga         >  2:59698/1‑149 (MQ=17)
                                                                                                                                                    cGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGACCAGCAACCGGCTAATGCGGAGCCAGAAGAAc    >  2:383676/1‑151 (MQ=255)
                                                                                                                                                     gTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCAACGCGCGCAAACGCGAACAGCAGCCGGCTAATGCCGAGCCagaagacc    >  4:1594029/1‑148 (MQ=17)
                                                                                                                                                      tGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCAGTAGCAGCGGCTATTGCCCGCGCGCACGCCCGCAAAGGGGCCCAGCACCAGGCTCTAGCGGAGGCcgaagagctg  >  8:169108/1‑147 (MQ=2)
                                                                                                                                                      |                                                                                                                                                       
ACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAG‑CACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAG  >  NC_000913/1708655‑1708955

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑