| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,708,880 | 0 | C | A | 24.8% | 330.7 / 35.6 | 202 | A654A (GCC→GCA) | rsxC | SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Reads supporting (aligned to +/- strand): ref base C (116/33); new base A (48/1); total (166/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.22e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 216 total aligned reads displayed.
AGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCT > NC_000913/1708732‑1709030 | aGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCGGCAGTGGACGCGGCTATTGCCCGCGCGCACGCCCGCAACCGGGAACAGCACCAGGCTTATGACGAGCCATAACTGCAGGTCGCTCTCCGCACAGCCGCAGt > 3:1294630/1‑151 (MQ=9) caggataattacgAACCAGAATAAGTTGTAGATCCTCGTAAATCTGCCGTTGAAGCAGCTATTGCCCGTGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGaa < 1:1803852/138‑1 (MQ=11) cAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCAAATGACGAGCCAGAACAACAGGACGATCCGCGCAAAGCCGCCGTCGa > 4:64773/1‑149 (MQ=255) aaTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCGGCAGTCGACGCGGCTATTGCCCGAGCCAACGCAAGAAACCAGGCACAGCAGAAGGGTAATGACGAGCCAGAACTCCACGTCGATACGCGCAGAGCCGCCGTCTCAGCGGCtt > 2:1303687/1‑150 (MQ=9) tctgacccAGAACAAGAGGTCGATCCTCGCAAACCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTAtt < 4:1314188/144‑1 (MQ=11) ggaagcagcaaccgaGGGCGATCCGCGCAAACCTGCCGTGGAAGCAGCTATTGCCCGTGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGcc < 3:311155/137‑1 (MQ=11) ggAACCAGAAGAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGCACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGCTCCGCGCACAGCCGCCGTTGCAGCGGCGATTGcc > 8:728208/1‑151 (MQ=14) aCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCGAAGGCAAGAAAGCGCGCACAGCACCAGGGTGATGCAGATCCAGAGCCACAGCGTGATCCGGCCACAGCCCCCGAGGAAGCGGCTATTGccggc > 8:1222208/1‑148 (MQ=2) agaagaACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCGGCTATTGCCCGCGcc > 2:998971/1‑151 (MQ=255) aagaaCAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTCGAACAGCAACAGGCTAATGCCGAGCCAGAACAACACGTGGATACGCGCAAAGCCGCAGTAGCAGCGGCTATTGCCCgcgcgc > 4:1412511/1‑148 (MQ=14) aaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGATCCAGAACAACAGGGTGATCCGCGCAAAGCGGCCGTCGACGCGGCTATTGCCCgcgcgcgggc > 2:746165/1‑145 (MQ=11) aaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAACGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTCGCCGCCGCTATTGCCCgcgcgcacgc > 8:229499/1‑145 (MQ=14) aaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAGCGGGAACAGCACCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCGGCTATTGCCCGCGCCAAGgc > 3:1448417/1‑151 (MQ=11) cAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACACCAGGTCGATCCGCGCAAAGCCGCCGTTGCCGCGGCTATTGCCCGCGCCAAGgccc > 2:1820675/1‑149 (MQ=14) cAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCCAAAGCAAGAAACCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGCTAGATCCGCGCAAAGCGGCCGTATAAGCGGCTATTGCCCGCGCGAACgccc > 5:692348/1‑149 (MQ=11) aGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCGAAAGCACGCAAGCGCGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGCTCCGCGCAAAGCCGCAGTGCCAGCGGCGATTGCCCGCGCAAAcgcg > 8:344440/1‑149 (MQ=14) gATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCAAGCAAGCTGGAACAGCAAAAGGCTAATGACGAGCCAGAAGAACAGGTCGATCAGCGCAAAGCCGCACTAGAACCCGCTATTGCACGAGCCAACgcaatcaaac > 2:1524373/1‑143 (MQ=11) gATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCCGCGGCTATTGCCCGCGCCAAGGCGATCAAAc > 7:1756281/1‑151 (MQ=14) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGGTAATGCCGAGCCAGAACAACAGGTCGCTCCGCGCAAAGCCGCAGTGGCAGCCGCTATTGCCCGCGCGAAGgccaacaaac > 7:1219944/1‑143 (MQ=14) ccGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGCCGCCGCTATTGCCCGCGCGAAGgccaaaaaacccg > 6:116263/1‑140 (MQ=11) cgcgCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGATCCAGAACAACAGGTGGATCCGCGCAAAGCCGCCGTGGCAGCCGCTATTGCCCGAGCGAAGgccaacaaaccggc > 8:1090526/1‑139 (MQ=14) cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCGGCTATTGCCCGCGCCCAAGCGAGCAAACGCGAAc > 2:237957/1‑151 (MQ=14) aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTGGCAGCCGCTATTGCCCGCGCGCAGGCCCGCAAACGGGCACAGc > 3:273598/1‑151 (MQ=14) aaaGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCAGTAGCAGCGGCTATTGCCCGAGCCAAAGCCAGAAAACGCGAACAGc > 8:1039839/1‑151 (MQ=14) aGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGAAACCGGCAAATGCCGAGGCAGCACAACAGGGCTCTCCGCGCAAAGGAGCCGTCGAAGCGGCTATTGAACGAGCCAAAGCGCGCACGCGGGATCAGctc > 8:1585720/1‑149 (MQ=14) gccgccGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCACAAGAACAGGTCGATCCGCGCAAAGCCGCAGTAGCCGCGGCTATTGCCCGCGCGCACGCCCCCAAACGCGACCAGCacc > 3:180829/1‑149 (MQ=11) cgccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCg < 2:64910/151‑1 (MQ=255) gccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCAAAAGCGCGAAAACGGGAACAGCaaaagg > 6:1184710/1‑147 (MQ=255) cgTCGAAGCCGCTATTGCCCGTGCTAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTGGAAGCGGCTATTGCCCGCGCTCAGGCGCGCAAAGGCGCCCAGCAGCAGGCt > 7:678545/1‑151 (MQ=14) gTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCGGCTATTGCCCGCGCCGACGCGAGCAAACCGGCACAGCACCAGGCt > 3:1429486/1‑150 (MQ=14) tCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTCGCAGCGGCTATTGCCCGAGCCAACGCGAGCAAACGGGAACAGCagcaggata > 2:142509/1‑142 (MQ=14) tCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAACGCGCGCAAACGGGAACAGCAACCGGCTa > 8:1795908/1‑150 (MQ=255) gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCCTCGACGAAGCTATTCCCCGAGCCCAAGCGCGCACTCCGGAACAGCACCAGGCGAATg > 3:377908/1‑151 (MQ=14) gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTAGCAGCCGCTATTGCCCGCGCCAACGCCAGCAAACCGGCCCAGCACCAGGTTaaac > 7:1637669/1‑149 (MQ=14) aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCGAAAGCGCGCAAACGGGACCAGCAACCGGCTAATGc > 1:218480/1‑151 (MQ=255) aGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTAGATCCGCGCAAAGCCGCAGTAGCCGCGGCTATTGCCCGAGCACAAGCCAGCAAACACGACCAGCagaaggctcaagac > 5:417317/1‑138 (MQ=11) aGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGACCCGCCACCGGCTAATGCg > 7:1733498/1‑151 (MQ=255) aGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCCCGCAACCGGGACCAGCACCAGGCTCATGCg > 8:355723/1‑151 (MQ=14) gCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCGGTCGAAGAAGCTATTGCGCGAGCGAAGGCGCGGAAACGGGAACAGCAACCGGCTAATGCgg > 4:1617260/1‑151 (MQ=14) gCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAACCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCAAAAAAACCCGAACAGCaaaaggataaaaacg > 4:1391218/1‑138 (MQ=11) gCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGCGGCCGTAGACGCCGCTATTGCCCGCGCCAAAGCCCGCAAACCCGACCAGCACCAGGCTAATGACGAGc > 4:1056591/1‑151 (MQ=11) gCTATTGACCTTGACAAAGCTCGCAAGCTGGAACAGCATCAGGCTAATGCCGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGc < 2:1017743/151‑1 (MQ=14) cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTGGCCGCGGCTAATGCCCGCGCGCACGCCCGCAAAGGCGAACAGCACCAGGCTAATCCCGAggc > 4:1741525/1‑149 (MQ=14) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCGGCTATTGCCCGCGCCCAAGCCCGCAAACGCGCCCAGCACCAGGCTAAAGCGGAGca > 1:1770270/1‑149 (MQ=14) aTTGCCCTTTCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCTCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGcc < 4:401375/149‑1 (MQ=255) cgccgcgctccAGAGCTCGCAAGCTGGAACAGCAACTGTCTTATGGGTACCGAGAACAACAGGTCGATCCGCGCTAAGCTTCCGTCTAAGCCTCTATTTCGCGAGACAAAGCTCGCAATCTGGAACAGCAACCGGCTAATGCGGAGCCaga < 4:368033/142‑1 (MQ=255) cccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGCGCGAAAGCCAGCAAACCGGAACAGCAACAGGCTAATGCGGAGCCaga > 6:530860/1‑148 (MQ=14) ccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCACACGCCAGCAAACCGGACCAGCACCAGGGTCATGCCGAGCCagaagac > 4:938961/1‑150 (MQ=11) cGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGACCAGCAACCGGCTAATGCGGAGCCAGAAGAAc > 2:383676/1‑151 (MQ=255) gTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCAACGCGCGCAAACGCGAACAGCAGCCGGCTAATGCCGAGCCagaagacc > 4:1594029/1‑148 (MQ=17) cAAACCACTCACCCTCGAACACCAACAGCCTAACGCCGATCCAGAACAACAGGTCGATCCTCTCAAATCCGCCGTCTAAGCCTCTATTCCCCTAGCCAAAGCTCTCAAACTCGAACAGCAACCTGCTAATGCGGAGCCAGAAGAACAGGtt < 6:1782045/151‑1 (MQ=255) aaaGCACGCAAGCTGGAACAGCAACAGGCTAATGCAGAGCCCGACCCCCCGCTTGATCCGAGCACACCCCGCGACGAAGCGGCTATTGCCCGAGCCACAGCAAGCAAACGGGAACAGCCCCCGGCTACTGCGgcgcgggagggccggggtg > 7:287570/1‑136 (MQ=9) aaGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTAGAAGCGGCTATTGCCCGAGCGAAAGCGAGGATACGAAGACAGGAAGCGTCTAATGCGGAGGAAGAATAAGTGGTTg > 1:570668/1‑150 (MQ=9) gCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCGGCAGTCGCAGCCGCTATTGCCCGAGCGCAGGCCAGAAAACGCGCACAGCACCAGGGTCAAGCCGAGGCAGAAGACCAGGtagct > 2:502139/1‑146 (MQ=9) cgggaaGCTGGAACAGCTTCAGCAAACTCCCGAGCCAGAACACCAGGCCGATCCCCGGAAACCGGCCGTCGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAATCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCcg < 3:981010/147‑1 (MQ=17) aCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTGGAAGCCGCTATTGCCCGAGCAAAAGCCAGCAAACCGGAACAGAAAGCGGAAGAGGCCGAGCCAGAAGAACAGGGAGATcac > 8:384708/1‑149 (MQ=14) aCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCGGCTATTGCCCGCGCGCAAGCTCGCAAGCGCGACCAGCAACCGAATAATGCGGGGGCAGCAGAACAGGTGGCTCcg > 5:1452299/1‑151 (MQ=14) gCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCACACGCCAACAAACCCGAACAGCAACAGGCTAATCCCGAACCAGAAGCACAGGGTGATCcgcg > 4:227938/1‑151 (MQ=11) gCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCGCCAAAACGCGAACAGCACCAGGATAATGCGGAGCAAGAAGAGCAGGTACATCcgcg > 6:880122/1‑151 (MQ=14) cAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCAAAAGCCAAAAAACCCGAACAGCAAAAGGATAAAAAGGAGAAAGAAAAACAGGATGATAcgcg > 6:1421385/1‑150 (MQ=9) aGCTGGAACAGCAACAGCCAACTCACGAGCCAGCAACAGTGGCCGATCCCCGCAAAACGGCCGTCGAAGCAGCTATTGCCCGCGCCAAAGCGCGCAAACTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCaa < 7:532263/151‑1 (MQ=14) gCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCGGCAGTGGACGCCGCTATTGCCCGCGCAAAAGCCAGCAGAACGGAACAGCAACCGTCTAATCACGAGACAGATGAACCGGTAGAtaatcccga > 2:1224371/1‑142 (MQ=9) cTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCCCAAGCCCGCAAACCCGCACAGCAACAGGCTAATGCGGAGCACGAAGAACAGGttcctcatcgaaa > 1:288609/1‑138 (MQ=11) tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTGGCAGCCGCTATTGCCCGCGCGCACGCGCGCAAACGGGACCAGCACCCGGCTAATGCGGAGCCCGAAGACCAGGTGGCTCCGCGCaccgc > 7:867532/1‑147 (MQ=14) tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGCGCGAAAGCCAACAAACCCGACCAGCAAAAGGGTAAAACCGAGCAAGAAAAACAGGTAGATCCGACCAAAGc > 6:1011900/1‑151 (MQ=2) gAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTg > 8:555706/1‑151 (MQ=255) acaccaaagtgCTAATGCCTATCCAGAACAAGTTGTCTATACGAGGAAATTCGGATTTGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGca < 5:377309/141‑2 (MQ=9) cAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCACGAGCCAAAGCGCGCAACCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGcgggcg > 2:935402/1‑146 (MQ=255) aaCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTAGCCGCCGCTATTGCCCGCGCGAACGCGCGCAAACGCGCCCAGCACCCGGCTCAAGCGGAGCAAGACGCACAGGGTGCTCCGCGCCAAGCAGCCGTCgc > 1:918412/1‑150 (MQ=9) aCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTGGCAGCGGCTATTGCCCGAGCAAAAGCCACAAAACGCGAACAGCACAAGGCTAAAGAGGAGCAAGAAGACCAGGTTGCTCCGCGCAAAgaccccgagga > 8:1670534/1‑140 (MQ=9) aaTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCGAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGACGCGGCt > 2:1042025/1‑150 (MQ=255) tGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAATCTGCAGTAGCAGCGGCTAtt > 5:1753085/1‑151 (MQ=17) gAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCCGCGGCTATTGccc > 5:140796/1‑149 (MQ=14) cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGCGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCCCAAAGCTGCAGTAGACGCGGCTATAGCAcgcg > 1:679906/1‑150 (MQ=14) aGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCATCCGCTATTGCCCGTTCGAAAGCGCGCAAGCGGGAACAGCAACCGGCTAATGCGGACCCAGAAGAAAAGGTAGATCCGCGCAAAGCGGCCGTCGGAGCGGCtggggcccgggcg > 7:215182/1‑139 (MQ=11) acaacaGGTCGATCCGCGCAAAGCAGCCGTCGAAGCAGATATTAACAGAGTCAAAGAGCGAAAGCGGGAACAGAAACCTGAAAATCACGATCCACAACAAAAGGTTAATAATAGAAAAGCTGCCGTCGAAGCCGCtcgggcgagcggcggg > 4:554536/1‑136 (MQ=2) aacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCACGCGCCAACGc > 8:1474447/1‑151 (MQ=255) aacaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGCAGCGGCTATTGCACGCGCAAAAGc > 5:863879/1‑151 (MQ=255) caGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGc < 3:1725955/88‑1 (MQ=255) gTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGc > 6:595911/1‑150 (MQ=255) cccgccGCGCAACCCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAATCTCGCAAACTGGAACAGCAACCGGCTAATGCGGAGGGAGTAGATCTGGTAGATCCGCGCAACGCAGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAg < 3:633725/147‑1 (MQ=14) cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCACACAAACACGAACAGAAATCGGCAAATCCGCAAGAAGAACAACAGTTTTATAAACGCAAAGCAGCAGTGGCCGCCGCTATTGCCcgagaaaaacagcacaa > 6:365763/1‑135 (MQ=2) gATCCGCGCAACGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCACTCAAGc > 1:1012539/1‑151 (MQ=255) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTAGCCGCGGCTATTGCACGCGCGAAGGCCAGCaaac > 6:1615957/1‑149 (MQ=11) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAACGCCCGCAAgg > 8:1446369/1‑150 (MQ=255) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGc > 2:68472/1‑151 (MQ=255) gATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGACGCGGCTATTGCACGCGCAAACGCCCGCAAgg > 1:343239/1‑150 (MQ=255) gATCCGCGCAAAGACGACGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGAAAACGGGAACAGCAAAAGGCTAATGCGGAGCCATAAGAACATGTTGATACGCGCAAATCTGCATTAGCAGCGTCTATTGCACTCGCAAAAGCaagaa > 4:1053178/1‑144 (MQ=255) aTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCTATTGCCCGCGCGCAAGCACGCAAGcg > 3:508041/1‑150 (MQ=255) cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAACGCCCGCAAGCTGGacc > 7:166163/1‑149 (MQ=255) ccccaaGCCGCCGTCGAAGCCTCTATTTACCTATCAAAAGCCCTCAACCGTGAACACCAACCTTCTAATGACGATCCAGAAGAACCTGTCGATCCGCTCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAAc < 6:1582704/147‑1 (MQ=9) taataacagccgTCGAAGCCGCTATATCACGAGACAATGCTCGCTTTCGGGAAAAGCAACTGTTTATTGCTGACGCAGAACAACATGTTGATCCTCGCAAATCTGCCGTCGAAGCCGCTATTGCACGCGCCAAAGCACGCAAGCTGGAAc < 5:761885/142‑1 (MQ=9) cgcccgcccccGCCGAAGCCGCTATTGCCCGTGCCAAAGCTCGCAAACGGGAACAGCAACCGTCTAATGCGGATCCAGAAGAACAGGTCGATCCGCGCATAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACa < 4:614475/146‑1 (MQ=11) acccccgccgGCGACGCCGCGATTCCCCGTGCCATAGCGCGCAAACACGAACAGAAACCCGCTACCGGGTCGCGAGATGACCAGCGAGCTCCGCGCATAGCAGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGc < 3:413324/147‑1 (MQ=9) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCAAAGCACGCAAGCTCGAACAGc > 4:961273/1‑151 (MQ=255) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCAGGAACAGc > 1:1595166/1‑151 (MQ=255) aaaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGCAGCGGCTATTGCACGCGCAAAAGCAAGCAAGCTGGAACacc > 6:81004/1‑149 (MQ=255) aaGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAACCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCcg > 3:1136981/1‑92 (MQ=255) aGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGAACAGCa > 2:1077370/1‑150 (MQ=255) ccgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCGAACGCACGCAAGCTGGAACAGCacc > 8:1723013/1‑148 (MQ=255) | AGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCT > NC_000913/1708732‑1709030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |