BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_000913	3,274,928	0	A→T	12.7%	38.6 ‑53.5 0.0	506	intergenic (‑21/‑354)	garP/garD	putative (D)‑galactarate transporter/D‑galactarate dehydrogenase
Rejected: Polymorphism prediction not supported by minimum number of reads on both strands.
Reads supporting (aligned to +/- strand): new base (64/0): ref base (174/268): total (238/268)
Fisher's exact test strand distribution p-value = 6.09e-24
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00

Only 100 of 513 total aligned reads displayed.

CCGCCGGGGATTTGCATCAGCAAGTAGGCCCAGCCAAAAGCGGAGAAGATGTAACCCATCGAAACCGCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGTTGCGCGCTAAAGCACAGATTTGCGCTTTACCTTACCGGGCGGCACTGCAATCCCTGAAATGATTGACATTGATCACATTTC  >  NC_000913/3274687‑3275177

                    cAAGTAGGCCCAGCCAAAAGCGGAGAAGATGTAACCCATCGAAACCGCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGgtg                                                                                                                                                                                                                               <  2:2775452/251‑1 (MQ=255)

                         aGGCCCAGCCAAAAGCGGAGAAGATGTAACCCATCGAAACCGCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGGATGCACGCCTTTCTTTTTTTTGTCAACGGGGTCCAGAATCATTTTATTTTTCTC‑GGGTACTTATGCTGATTTTTTTTATTATTGGGAAGGTGgtatt                                                                                                                                                                                                                          >  2:1988446/1‑251 (MQ=255)

                                              agaTGTAACCCATCGAAACCGCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAAAAATCCGTAATATTAAATAACGGGTATGGACGCCTTTCTTTTTTTTGTCAAAGGTGTCCAGAATCATTTTTTTTACCTC‑GGGTAATTTTGCTGTTTTTTTTTTTTTTTGGGGAGGTGTTTTTTTTGG‑GGTTTATTTATg                                                                                                                                                                                                        >  2:3740245/1‑247 (MQ=255)

                                                aTGTAACCCATCGAAACCGCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGgtg                                                                                                                                                                                                                               <  1:5727994/223‑1 (MQ=255)

                                                aTGTAACCCATCGAAACCGCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAAAAATCAGTAATATTAAATAGAGGGTATGAACGCCTTTCTTTTTTTTGTCAACGGGGTCCAGAAACATTTTATTTACCTC‑GGGTAATTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GGTTAATTTAtttcgtga                                                                                                                                                                                                  >  2:4128242/1‑244 (MQ=255)

                                                         aTCGAAACCGCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGa                                                                                                                                                                                         <  1:3186696/251‑1 (MQ=255)

                                                                          cTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGgt                                                                                                                                                                                                                                <  1:3602081/196‑1 (MQ=255)

                                                                             cAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGtat                                                                                                                                                                         <  2:3532866/247‑1 (MQ=255)

                                                                             cAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     <  2:5470270/251‑1 (MQ=255)

                                                                                ctctTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGttattta                                                                                                                                                                                                                        <  2:1273874/198‑1 (MQ=255)

                                                                                ctctTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     <  1:4600150/248‑1 (MQ=255)

                                                                                ctctTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAAAAATCAGGAATATTAAATAGCGGGGATGCACGCCTTTCTTTTTTTCGTCAAAGGGGTCCAGAAACATTTTTTTTTACTC‑GGGTACTTATGCTGATTTTTTTTATTATGGGGAAGGGGgttttta                                                                                                                                                                                                                        >  1:1274126/1‑198 (MQ=255)

                                                                                           cTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     <  2:2649272/237‑1 (MQ=255)

                                                                                           cTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAAAAAAAAAAATAATTCGCAATATTAAATAAAGGGGTTGCACGCCTTTCTTTTTTTCGTCAAACGGGAACCGAATCATTTTATTTATCTCGGGGTCCTTA‑GATTATTTTTATTTTTAAAGGGAAGGGGTTATTTATTA‑GATTCACTTATTGCCAAACAACAAAAAACTCAGGAATATGTATAagcagaccgaaaaaaaa                                                                                                                                                       >  1:4780987/1‑239 (MQ=255)

                                                                                                    cAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     <  2:607466/228‑1 (MQ=255)

                                                                                                      gCAATAGACAGTGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATc                                                                                                                                                   <  1:4027081/244‑1 (MQ=255)

                                                                                                      gCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTTACAAAAAAAAAAATCACTAAAATTTAAAATGGGGTGTGTACGCCTTTCTTTTTTTCGTCCACGGGGTCCAGAATCATTTTTTTTACTTC‑CGGTGCTTTTTCTGATTTTTTTTTTTATTGGGGAAGTGttattt                                                                                                                                                                                                                         >  2:104448/1‑175 (MQ=255)

                                                                                                      gCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTTAATAGCGGGGATGCACGCCTTTCTTTTTTTTTTCAACGGGGTCCAGAATCATTTTTTTTACCTC‑GGGGACTTTTGCTGATTTTTTTTTTTTTTGGGGAGGGGTTTTTTATGA‑GGTTCATTTTTGc                                                                                                                                                                                                       >  1:1180376/1‑192 (MQ=255)

                                                                                                      gCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTttat                                                                                                                                                                                                                                               <  1:3142688/153‑1 (MQ=255)

                                                                                                      gCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGgt                                                                                                                                                                                                                                <  2:2722728/168‑1 (MQ=255)

                                                                                                      gCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGc                                                                                                                                                                                                       <  2:1180130/192‑1 (MQ=255)

                                                                                                      gCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAAAAATAAGTAATATTAAATAGCGGGGATGCACGCCTTTCTTTTTTTTGTCAACGGGGTTCAAAAACATTTTTTTTACCTC‑GGGGATTTTTGTTGATTTTTTTTTTTATGGGGGAGGGGTTTTTTTTGA‑g                                                                                                                                                                                                                   >  2:2603457/1‑180 (MQ=255)

                                                                                                      gCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAAAAAAAAAAATAAGGAATATTTAATAACGGGTATGCACGCCTTTTTTTTTTTTGTCAACGGGGGCCAGAATCATTTTTTTTTCCTC‑GGGGACTTTTTCTGATTTTTTTTTTTTTGGGGGAGGTGTTTTTTTTTA‑GGTTTATTTTTTCCGTAACGACAATGAACTCGGGGATTAGTATAagc                                                                                                                                                                     >  2:4373500/1‑226 (MQ=255)

                                                                                                      gCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAAAAATAAAAAAAATCCATAATATTAAATAACGGGGATGCACGCCTTTCTTTTTTTCGTCAACAGGGTCCAGAAACATTTTATTTACCTC‑GGGGACTTTTGCTGATTTTTTTTATTTTGGGGaaagg                                                                                                                                                                                                                                >  1:2723167/1‑165 (MQ=255)

                                                                                                      gCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAAAAATAAAAAAAATCAGTAATATTTAATAACGGGGATGCACGCCCTTTTTTTTTTTGTCAACGGGGTCCAGAATCATTTTTTTTTCCTC‑GGGGACTTTTGCTGTTTTTTTTTTTTTTTGGGGAGGGGGTATTTTTTA‑GTTTTTTTTTTTCCGTAACGACAAAGGACTCGGGGATTATTATAATCAGCGCGAGAATAATAATCAttttt                                                                                                                                             >  2:4510829/1‑247 (MQ=255)

                                                                                                      gCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGCAAAAAAAAAAAAAAATAATGATATTAAATAAGGGGGAAACACCACCTTCTTTTTTTCATCAAATGTGGCCAAAATTAAATTATTTAACTC‑GGGGTAATATACTTATTTTTATTATTATGGGGAAGGTGATATTTATTAGGTTTCTttttgt                                                                                                                                                                                                        >  1:4075149/1‑189 (MQ=255)

                                                                                                           aGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATg                                                                                                                                                                                                                      <  2:3854134/173‑1 (MQ=255)

                                                                                                           aGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑g                                                                                                                                                                                                                   <  2:3379789/175‑1 (MQ=255)

                                                                                                                gCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGAtt                                                                                                                                                                                                                                                    <  1:256708/138‑1 (MQ=255)

                                                                                                                gCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGttatt                                                                                                                                                                                                                          <  2:3616080/164‑1 (MQ=255)

                                                                                                                gCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAgcg                                                                                                                                                                 <  2:1468942/220‑1 (MQ=255)

                                                                                                                              gCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTttattatta                                                                                                                                                                                                                                          <  1:148596/134‑1 (MQ=255)

                                                                                                                              gCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     <  1:5539930/202‑1 (MQ=255)

                                                                                                                                  aGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGttatt                                                                                                                                                                                                                          <  1:1024970/146‑1 (MQ=255)

                                                                                                                                                 cAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTTAGCa                                                                                                 >  1:2301536/1‑251 (MQ=255)

                                                                                                                                                              cAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGAc                                                                                                                                                                                              <  2:3675787/145‑1 (MQ=255)

                                                                                                                                                              cAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGAc                                                                                                                                                                                              >  1:3676389/1‑145 (MQ=255)

                                                                                                                                                              cAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAAc                                                                                                                                                                                       <  2:4930322/152‑1 (MQ=255)

                                                                                                                                                                gTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATa                                                                                       <  1:5416311/246‑1 (MQ=255)

                                                                                                                                                                   atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTttatt                                                                                                                                                                                                                                              >  1:3490668/1‑93 (MQ=255)

                                                                                                                                                                   atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATgggg                                                                                                                                                                                                                                     >  2:5844745/1‑102 (MQ=255)

                                                                                                                                                                   atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATgggg                                                                                                                                                                                                                                     <  1:2111499/102‑1 (MQ=255)

                                                                                                                                                                   atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGttattt                                                                                                                                                                                                                         >  1:614370/1‑114 (MQ=255)

                                                                                                                                                                   atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑g                                                                                                                                                                                                                   <  2:4785768/119‑1 (MQ=255)

                                                                                                                                                                   atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCAtt                                                                                                                                                                                                            <  1:3325598/126‑1 (MQ=255)

                                                                                                                                                                   atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGc                                                                                                                                                                                                       <  1:4488376/131‑1 (MQ=255)

                                                                                                                                                                   atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAAc                                                                                                                                                                                       <  2:5572692/147‑1 (MQ=255)

                                                                                                                                                                   atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     >  1:662608/1‑165 (MQ=255)

                                                                                                                                                                   atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATAc                                                                                                                       <  1:4389177/211‑1 (MQ=255)

                                                                                                                                                                   atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATa                                                                                       >  1:4254297/1‑243 (MQ=255)

                                                                                                                                                                   atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATa                                                                                       <  1:414799/243‑1 (MQ=255)

                                                                                                                                                                   atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGt                                                                                   <  2:922961/247‑1 (MQ=255)

                                                                                                                                                                   atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGTTgcg                                                                               >  2:1546093/1‑251 (MQ=255)

                                                                                                                                                                   atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGTTgcg                                                                               >  2:660582/1‑251 (MQ=255)

                                                                                                                                                                   atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGAACATAAgg                                                                                    >  2:3055967/1‑246 (MQ=255)

                                                                                                                                                                   atatTAAATAGCGGGTATGCACGACTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGt                                                                                   <  1:2642108/247‑1 (MQ=255)

                                                                                                                                                                     atTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATgggg                                                                                                                                                                                                                                     <  2:1719616/100‑1 (MQ=255)

                                                                                                                                                                     atTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     <  1:3807643/163‑1 (MQ=255)

                                                                                                                                                                     atTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGCACTTATGCTGATTTTTATTATTATgggg                                                                                                                                                                                                                                     >  1:1719921/1‑100 (MQ=255)

                                                                                                                                                                       tAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     >  2:2115561/1‑161 (MQ=255)

                                                                                                                                                                         aaTAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     >  2:5148902/1‑159 (MQ=255)

                                                                                                                                                                         aaTAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     <  1:5109006/159‑1 (MQ=255)

                                                                                                                                                                                ggaaTGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAAc                                                                                                                                                                                       >  1:4966014/4‑134 (MQ=255)

                                                                                                                                                                                ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGa                                                                                                                                                                                                                                    <  1:1353850/90‑1 (MQ=255)

                                                                                                                                                                                ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGa                                                                                                                                                                                                                                    >  2:1353595/1‑90 (MQ=255)

                                                                                                                                                                                ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGaan                                                                                                                                                                                       <  2:4965178/134‑2 (MQ=255)

                                                                                                                                                                                ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCggg                                                                                                                                                                                  >  2:3143413/1‑139 (MQ=255)

                                                                                                                                                                                ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     >  2:2946806/1‑152 (MQ=255)

                                                                                                                                                                                ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     <  2:3255396/152‑1 (MQ=255)

                                                                                                                                                                                ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     >  1:5946811/1‑152 (MQ=255)

                                                                                                                                                                                ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGcac                                                                                          >  2:4602105/1‑227 (MQ=255)

                                                                                                                                                                                ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGt                                                                                   >  2:426052/1‑234 (MQ=255)

                                                                                                                                                                                 gTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     >  2:4060270/1‑151 (MQ=255)

                                                                                                                                                                                   aTGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCt                                                                                                                                                                                                                                                        >  2:318630/1‑67 (MQ=255)

                                                                                                                                                                                   aTGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAAc                                                                                                                                                                                       >  1:866342/1‑131 (MQ=255)

                                                                                                                                                                                   aTGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     <  1:4871859/149‑1 (MQ=255)

                                                                                                                                                                                    tGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGcgcg                                                                                                                                                               >  2:2389421/1‑154 (MQ=255)

                                                                                                                                                                                      cACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGaataataa                                                                                                                                                     >  2:593024/1‑162 (MQ=255)

                                                                                                                                                                                          ccTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGttatt                                                                                                                                                                                                                          >  2:4205138/1‑90 (MQ=255)

                                                                                                                                                                                          ccTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCAttt                                                                                                                                                                                                           <  1:5301397/104‑1 (MQ=255)

                                                                                                                                                                                          ccTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCAttt                                                                                                                                                                                                           >  2:5300499/1‑104 (MQ=255)

                                                                                                                                                                                          ccTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCAt                                                                                                                                                 >  1:2661747/1‑162 (MQ=255)

                                                                                                                                                                                          ccTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTAt                                                                                                                    >  2:4408256/1‑191 (MQ=255)

                                                                                                                                                                                                       cGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGttattt                                                                                                                                                                                                                         <  2:2836625/78‑1 (MQ=255)

                                                                                                                                                                                                       cGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     <  1:3255295/129‑1 (MQ=255)

                                                                                                                                                                                                            aCGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGttatt                                                                                                                                                                                                                          <  1:950094/72‑1 (MQ=255)

                                                                                                                                                                                                            aCGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATAc                                                                                                                       <  1:1611290/170‑1 (MQ=255)

                                                                                                                                                                                                            aCGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATAc                                                                                                                       >  2:1610989/1‑170 (MQ=255)

                                                                                                                                                                                                                 gtCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCAttt                                                                                                                                                                                                           >  1:3894427/1‑81 (MQ=255)

                                                                                                                                                                                                                 gtCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     >  1:5831063/1‑119 (MQ=255)

                                                                                                                                                                                                                 gtCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     <  1:4319914/119‑1 (MQ=255)

                                                                                                                                                                                                                 gtCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGcac                                                                                          <  1:2776759/194‑1 (MQ=255)

                                                                                                                                                                                                                 gtCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGTTGCGCGCTAAAGcac                                                                    >  2:5354896/1‑216 (MQ=255)

                                                                                                                                                                                                                  tCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGTTGCGCGCTAAAGCACAGATTTGCGCTTTACCTTACCGGGCGGCACTGCaa                                 <  1:1546369/250‑1 (MQ=255)

                                                                                                                                                                                                                           aTTTTATTTACTTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCCTTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATa                                                                                       >  1:2919143/1‑187 (MQ=255)

                                                                                                                                                                                                                              ttatttaCCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGcac                                                                                          <  1:3042494/181‑1 (MQ=255)

                                                                                                                                                                                                                               tatttaCCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGt                                                                                   >  2:3930152/1‑187 (MQ=255)

                                                                                                                                                                                                                                atttaCCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                     <  2:8041/104‑1 (MQ=255)

                                                                                                                                                                                                                                atttaCCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCtaatttaatt                                                                                                                            >  2:5738503/1‑145 (MQ=255)

                                                                                                                                                                                                                                             tACTTATGCTGATTTTTATTATTATGGGGAAGGGGTTTTTTATGA‑GTTTCATTTATTCCGTAAAGACAATGAACTCGGGGATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATAATATTTAAATATTATTTTGAGCATATGCAAAt                                                                                        >  1:1952045/1‑169 (MQ=255)

CCGCCGGGGATTTGCATCAGCAAGTAGGCCCAGCCAAAAGCGGAGAAGATGTAACCCATCGAAACCGCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCATTTTATTTACCTC‑GGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGA‑GTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGTTGCGCGCTAAAGCACAGATTTGCGCTTTACCTTACCGGGCGGCACTGCAATCCCTGAAATGATTGACATTGATCACATTTC  >  NC_000913/3274687‑3275177

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.