BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_000913	3,274,943	0	A→T	11.1%	30.1 ‑44.1 0.0	487	intergenic (‑36/‑339)	garP/garD	putative (D)‑galactarate transporter/D‑galactarate dehydrogenase
Rejected: Polymorphism prediction not supported by minimum number of reads on both strands.
Reads supporting (aligned to +/- strand): new base (54/0): ref base (176/256): total (231/256)
Fisher's exact test strand distribution p-value = 6.97e-20
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00

Only 100 of 509 total aligned reads displayed.

GGATTTGCATCAGCAAGTAGGCCCAGCCAAAAGCGGAGAAGATGTAACCCATCGAAACCGCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGTTGCGCGCTAAAGCACAGATTTGCGCTTTACCTTACCGGGCGGCACTGCAATCCCTGAAATGATTGACATTGATCACATTTCTGCGTTTAAA  >  NC_000913/3274694‑3275187

       cATCAGCAAGTAGGCCCAGCCAAAAGCGGAGAAGATGTAACCCAGCGAAACCGCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATgggg                                                                                                                                                                                                                                              <  1:2669342/251‑1 (MQ=255)

             cAAGTAGGCCCAGCCAAAAGCGGAGAAGATGTAACCCATCGAAACCGCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGgtg                                                                                                                                                                                                                                        <  2:2775452/251‑1 (MQ=255)

              aaGTAGGCCCAGCCAAAAGCGGAGAAGATGTAACCCATCGAAACCGCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTttattatta                                                                                                                                                                                                                                                   <  1:980398/239‑1 (MQ=255)

              aaGTAGGCCCAGCCAAAAGCGGAGAAGATGTAACCCATCGAAACCGCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAAGAAAATTTAAAAACGGGGATGCACGCCCTTCTTTTTTTTGTTAACGGGGTCCCGAAACA‑TTTTTTTTTCCTCCGGTACTTATTCTGATTTTTTTTTTTTTTGGGGAGgggt                                                                                                                                                                                                                                       >  1:3533433/1‑251 (MQ=255)

                         gCCAAAAGCGGAGAAGATGTAACCCATCGAAACCGCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTTAATAAAGGGTATGCACGCCCTTCTTTTTTTTGTCAACGGGGTCCAGAATCA‑TTTTATTTTCCTCGGGTGCTTTTTCTGGTTTTTTTTTTTTTTGGGGAGGGGttattttttttt                                                                                                                                                                                                                            >  2:801664/1‑245 (MQ=255)

                                        gaTGTAACCCATCGAAACCGCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATTAGTAATATTTAATAGCGGGGGTGCACGCCTTTTTTTTTTTTGTTCACGGTGTTCAGAATCA‑TTTTTTTTTCCTCCGGTTCTTTTTCTGTTTTTTTTTATTTTTGGGGAGGTGTTATTTTTGAGtttttttttttttttt                                                                                                                                                                                                             >  2:2421084/1‑238 (MQ=255)

                                        gaTGTAACCCATCGAAACCGCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCAGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATgg                                                                                                                                                                                                                                                <  2:4255036/216‑1 (MQ=255)

                                                           gCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAAAAAAAAAAATAAGTAATATTAAAAAACGGGGATGCACGCCTTTTTTTTTTTTGTCAACGGGGTCCAGAATCA‑TTTTTTTTACCTCGGGGACTTTTGTTTGTTTTTTTTTTTTTTGGGGAGGGGGTATTTTTTTGTTTTATTTTTTTCTTAACGAAaaataaatctggga                                                                                                                                                                                          >  2:5441594/1‑239 (MQ=255)

                                                            cACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAAAAAAAAAAATCAGTAATATTTAATAGCGGGGATGCACGCCTTTCTTTTTTTTGTCAACGGTGTCCCGAATAA‑TTTTATTTTCCTCTGGTCCTTTTTCTGATTTTTTTTATTTTTGGGGAGGGGTTTTTTTTGAGTTTTATTTTTTCCGTATCGACAATGAACTCGGGAAt                                                                                                                                                                                         >  1:5471191/1‑251 (MQ=255)

                                                                      cAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               <  1:4381226/251‑1 (MQ=255)

                                                                                          tACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCa                                                                                                                                                            <  1:2103206/250‑1 (MQ=255)

                                                                                               gCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTTAATAACGGGGATGCACGCCTTTTTTTTTTTTGTCAAAGGGGTCCAGAATCA‑TTTTATTTTTCTCGGGGTCTTTTGCTGATTTTTTTTATTTTTGGGGAGGGGTTTTTTTTGAGTTTTATTTTTgg                                                                                                                                                                                                                 >  1:4940236/1‑191 (MQ=255)

                                                                                               gCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGgt                                                                                                                                                                                                                                         <  2:2722728/168‑1 (MQ=255)

                                                                                               gCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGttatt                                                                                                                                                                                                                                   <  2:1389320/174‑1 (MQ=255)

                                                                                               gCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGc                                                                                                                                                                                                                 <  2:4939401/192‑1 (MQ=255)

                                                                                               gCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAAAAATAAAAAAAATCAGTAATATTAAATAGCGGGGATGCACGCCCTTTTTTTTTTTGTCAACGGTGTCCAGAATCA‑TTTTTTTTTCCTCGGGGACTTATTCTGGTTTTTTTTTTTATTGGGGAGGGGTTATTTTTTAGTTTTATTTTTGCCGTAACGACAAAGAAATCGGGAATTAGTATaaa                                                                                                                                                                                >  1:3946586/1‑224 (MQ=255)

                                                                                                    aGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               <  1:4135006/221‑1 (MQ=255)

                                                                                                    aGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAAAAATAAGGAAAATTAAATAGCGGGGATGCACGCCCTTCTTTTTTTTGTCAAAGGTGGCCAGAATCA‑TTTTATTTACCCCGGGGACTTATGCTGGTTTTTTTTATTTTGGGGAAGGGGGTATTTTTg                                                                                                                                                                                                                               >  1:3854754/1‑173 (MQ=255)

                                                                                                    aGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAAAAATAAGGAAAATTAAAAAACGGGGATGCACGCCCTTTTTTTTTTTGGCCACCGGGGCAAGAAACA‑TTTTTTTTACCTCGGGGAATTATGCCGATTTTTATTTTTATGGGGaaagg                                                                                                                                                                                                                                         >  1:4520745/1‑160 (MQ=255)

                                                                                                         gCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTTAATAGCGGGTATTCACGCCCTTCTTTTTTTTGTCCACGGTGTCCCGAATCA‑TTTTTTTTTCCTCGGGTTCTTTTTCTTTTTTTTTTTTTTTTTGGGGAGGGTTTATTTTTTAGTTTTATTTTTTCCGTAACGACAATGAACTCGTGGATTTGTATAAGCCGCGCGAGGATAATAATCATTGTGCAAATGCtaat                                                                                                                                            >  1:4984114/1‑251 (MQ=255)

                                                                                                         gCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAAAAAAAAAAATCAGTAAAATTAAATAACGGGGATGCACGCCTTTCTTTTTTTTTTCAACGGGGTTCAGAAACA‑TTTTTTTTTTCTCCGGGACTTTTTTTTATTTTTTTTTTTTTTGGGGAGGTGTTATTTTTTAGTTTTTTTTTTGTCTTTACGACAATGAAc                                                                                                                                                                                                 >  2:3291430/1‑198 (MQ=255)

                                                                                                           gTTGCACGATCGGCGTAGTTAACGGCGGTAAAAATAAAAATAATCAGTAATATTAAATAGCGGGGATGCACGCCTTTCTTTTTTTTGTCCACGGTGTCCAGAAACA‑TTTTTTTTACCTCGGGGACTTATGCTGGTTTTTTTTATTATTGGGGAGGTGTTTTTTTTGAGTTTTATTTATGCCGTAACGACAATGAAATCGGGGATTAGTATAAACAACGCGAGAATAATAATCATTTTGCAAATGc                                                                                                                                                >  1:4432240/1‑245 (MQ=255)

                                                                                                            ttGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               <  2:2609746/213‑1 (MQ=255)

                                                                                                            ttGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATc                                                                                                                                                             <  2:3732426/231‑1 (MQ=255)

                                                                                                            ttGCACGATCGGCGTAGTTAACGGCGGTAACAAAAAAAAAAATCAGTAATATTAAATAGCGGGGATGCCCGCCCTTCTTTTTTTTGTCAACCGGGTCCCGAATCATTTTTTTTTACTCCGGGAATTTTTCTTGTTTTTTTTTTTTTTGGGGAGGGGTTTTTTTTTAGGTTTCTTTTTTCCCG‑AAAGAAAAAGAAATCGGGGATTAATAAAAAAAGGGCGTGaaaaataaatccttctcttttataaatat                                                                                                                                          >  1:3733031/1‑229 (MQ=255)

                                                                                                                    tCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATAc                                                                                                                                 <  1:3216806/251‑1 (MQ=255)

                                                                                                                       gCGTAGTTAACGGCGGTAACAATAAAAATAATCCGTAATATTAAATAGCGGGGATGCACGCCTTTTTTTTTTTTGTCAACGGTGTCCAGAATCA‑TTTTTTTTACCTCGGGTACTTATGCTGATTTTTTTTATTTTGGGGGAGGTGTTATTTTTGAGTTTCATTTATTCCGTAACGACAATGAACTCGGGGATTAGTATAagc                                                                                                                                                                               >  2:5539007/1‑202 (MQ=255)

                                                                                                                       gCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTttattatta                                                                                                                                                                                                                                                   <  1:148596/134‑1 (MQ=255)

                                                                                                                           aGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGttatt                                                                                                                                                                                                                                   <  1:1024970/146‑1 (MQ=255)

                                                                                                                                    cggTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTAttt                                                                                                                 <  2:4983268/251‑1 (MQ=255)

                                                                                                                                    cggTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTAttt                                                                                                                 <  2:4102365/251‑1 (MQ=255)

                                                                                                                                          cAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCGCGCCTTTCTTTTTTTCGTCAGCGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGgt                                                                                                                                                                                                                                         <  2:1594098/125‑1 (MQ=255)

                                                                                                                                          cAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAg                                                                                                                                                                                                                             >  2:1299423/1‑137 (MQ=255)

                                                                                                                                          cAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATc                                                                                                                                                             >  1:3344824/1‑201 (MQ=255)

                                                                                                                                                aaaTAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGttatttacg                                                                                                                                                                                                                               <  2:2660680/129‑3 (MQ=255)

                                                                                                                                                       cAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCg                                                                                                                                                                                                               >  2:3564913/1‑138 (MQ=255)

                                                                                                                                                       cAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               >  1:1928431/1‑170 (MQ=255)

                                                                                                                                                         gTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               <  2:1518646/168‑1 (MQ=255)

                                                                                                                                                          tAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAg                                                                                               <  2:3153996/247‑1 (MQ=255)

                                                                                                                                                            atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATgggg                                                                                                                                                                                                                                              <  1:5845742/102‑1 (MQ=255)

                                                                                                                                                            atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGc                                                                                                                                                                                                                 >  2:4487607/1‑131 (MQ=255)

                                                                                                                                                            atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAAc                                                                                                                                                                                                 >  1:5573615/1‑147 (MQ=255)

                                                                                                                                                            atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               >  1:662608/1‑165 (MQ=255)

                                                                                                                                                            atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATAc                                                                                                                                 >  2:4388413/1‑211 (MQ=255)

                                                                                                                                                            atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTAttt                                                                                                                 >  2:4818042/1‑227 (MQ=255)

                                                                                                                                                            atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTAttt                                                                                                                 <  1:4818877/227‑1 (MQ=255)

                                                                                                                                                            atatTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGTTgcg                                                                                         >  2:660582/1‑251 (MQ=255)

                                                                                                                                                            atatTAAATAGCGGGTATGCACGACTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGt                                                                                             <  1:2642108/247‑1 (MQ=255)

                                                                                                                                                              atTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               <  2:3827307/163‑1 (MQ=255)

                                                                                                                                                              atTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGCACTTATGCTGATTTTTATTATTATgggg                                                                                                                                                                                                                                              >  1:1719921/1‑100 (MQ=255)

                                                                                                                                                                tAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               >  2:2115561/1‑161 (MQ=255)

                                                                                                                                                                         ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGa                                                                                                                                                                                                                                             <  1:1353850/90‑1 (MQ=255)

                                                                                                                                                                         ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGttattta                                                                                                                                                                                                                                 <  2:1091203/102‑1 (MQ=255)

                                                                                                                                                                         ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGttattt                                                                                                                                                                                                                                  <  2:3914316/101‑1 (MQ=255)

                                                                                                                                                                         ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGttattt                                                                                                                                                                                                                                  >  1:2748818/1‑101 (MQ=255)

                                                                                                                                                                         ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATg                                                                                                                                                                                                                               >  2:916360/1‑104 (MQ=255)

                                                                                                                                                                         ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATg                                                                                                                                                                                                                               <  1:916536/104‑1 (MQ=255)

                                                                                                                                                                         ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCggg                                                                                                                                                                                            <  1:3143912/139‑1 (MQ=255)

                                                                                                                                                                         ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               <  1:2947262/152‑1 (MQ=255)

                                                                                                                                                                         ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               >  1:3255913/1‑152 (MQ=255)

                                                                                                                                                                         ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               >  1:5946811/1‑152 (MQ=255)

                                                                                                                                                                         ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               >  2:2946806/1‑152 (MQ=255)

                                                                                                                                                                         ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               >  2:5862130/1‑152 (MQ=255)

                                                                                                                                                                         ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               <  2:4055099/152‑1 (MQ=255)

                                                                                                                                                                         ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               <  2:5945809/152‑1 (MQ=255)

                                                                                                                                                                         ggTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGt                                                                                             >  2:4171018/1‑234 (MQ=255)

                                                                                                                                                                          ttATGCACGCTTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGTTGCGCGCTAAAGCACAGa                                                                           <  1:2289317/250‑1 (MQ=255)

                                                                                                                                                                            aTGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               <  1:422866/149‑1 (MQ=255)

                                                                                                                                                                                   ccTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGtat                                                                                                                                                                                   <  2:3662968/138‑1 (MQ=255)

                                                                                                                                                                                   ccTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGtat                                                                                                                                                                                   >  1:3663565/1‑138 (MQ=255)

                                                                                                                                                                                                cGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGttattt                                                                                                                                                                                                                                  <  2:2836625/78‑1 (MQ=255)

                                                                                                                                                                                                cGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGttattt                                                                                                                                                                                                                                  >  1:2837081/1‑78 (MQ=255)

                                                                                                                                                                                                     aCGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATAc                                                                                                                                 <  1:1611290/170‑1 (MQ=255)

                                                                                                                                                                                                        gtgtCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGc                                                                                                            >  1:4278637/1‑188 (MQ=255)

                                                                                                                                                                                                          gtCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACg                                                                                                                                                                                                          <  2:3398990/92‑1 (MQ=255)

                                                                                                                                                                                                          gtCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               >  2:4319161/1‑119 (MQ=255)

                                                                                                                                                                                                          gtCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGaataataa                                                                                                                                                               <  2:610366/135‑1 (MQ=255)

                                                                                                                                                                                                          gtCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAata                                                                                                                       <  2:4694061/175‑1 (MQ=255)

                                                                                                                                                                                                           tCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGTTGCGCGCTAAAGCACAGATTTGCGCTTTACCTTACCGGGCGGCACTGCaa                                           <  1:1546369/250‑1 (MQ=255)

                                                                                                                                                                                                                      ttttATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               <  1:1222498/108‑1 (MQ=255)

                                                                                                                                                                                                                        ttatttaCCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGcac                                                                                                    >  2:3041999/1‑181 (MQ=255)

                                                                                                                                                                                                                        ttatttaCCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGcac                                                                                                    <  1:3042494/181‑1 (MQ=255)

                                                                                                                                                                                                                          attttCCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCtaatttaatt                                                                                                                                      <  1:5739446/145‑1 (MQ=255)

                                                                                                                                                                                                                          atttaCCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               >  1:8060/1‑104 (MQ=255)

                                                                                                                                                                                                                             taCCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAg                                                                                               <  2:1188180/181‑1 (MQ=255)

                                                                                                                                                                                                                                   gggTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               >  1:1155885/1‑95 (MQ=255)

                                                                                                                                                                                                                                   gggTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAagc                                                                                                                                                                               >  1:4075088/1‑95 (MQ=255)

                                                                                                                                                                                                                                   gggTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGaa                                                                                                                                                                     >  2:4545866/1‑105 (MQ=255)

                                                                                                                                                                                                                                      tACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATAc                                                                                                                                 >  2:5353482/1‑138 (MQ=255)

                                                                                                                                                                                                                                      tACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATAc                                                                                                                                 <  1:5354380/138‑1 (MQ=255)

                                                                                                                                                                                                                                      tACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGt                                                                                             <  2:1704010/174‑1 (MQ=255)

                                                                                                                                                                                                                                      tACTTATGCTAATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACAt                                                                                                  <  2:1951710/169‑1 (MQ=255)

                                                                                                                                                                                                                                        cTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGt                                                                                             <  2:5164076/172‑1 (MQ=255)

                                                                                                                                                                                                                                        cTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGt                                                                                             >  1:5164949/1‑172 (MQ=255)

                                                                                                                                                                                                                                          tATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGc                                                                                                            <  2:5779875/155‑1 (MQ=255)

                                                                                                                                                                                                                                                  tttttATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGTTGCGCGCTAAAGCACAGATTTGCGCTTTACCTTACCg                                                        <  1:2508884/199‑1 (MQ=255)

                                                                                                                                                                                                                                                     ttattattaTGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGTTGCGCGCTAAAGCACAGATTTgcgc                                                                    >  2:5649152/1‑184 (MQ=255)

                                                                                                                                                                                                                                                     ttattattaTGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGTTGCGCGCTAAAGCACAGATTTGCGCTTTACCTTACCGGGCGGCAc                                                >  2:323803/1‑204 (MQ=255)

                                                                                                                                                                                                                                                          attatGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAgg                                                                                              <  1:624515/153‑1 (MQ=255)

                                                                                                                                                                                                                                                          attatGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGt                                                                                             <  1:4690237/154‑1 (MQ=255)

GGATTTGCATCAGCAAGTAGGCCCAGCCAAAAGCGGAGAAGATGTAACCCATCGAAACCGCACTTAACTGCAACTCTTTTGCCACTTCGGTACCAGCAATAGACAGCGTTGCACGATCGGCGTAGTTAACGGCGGTAACAATAAAAATAATCAGTAATATTAAATAGCGGGTATGCACGCCTTTCTTTTTTTCGTCAACGGTGTCCAGAATCA‑TTTTATTTACCTCGGGTACTTATGCTGATTTTTATTATTATGGGGAAGGTGTTATTTATGAGTTTCATTTATGCCGTAACGACAATGAACTCGGGAATTAGTATAAGCAGCGCGAGAATAATAATCATTGTGCAAATGCTAATTTAATTAATACTATTTAAATATTATTTTGAGCATATGCACATAAGGTTGCGCGCTAAAGCACAGATTTGCGCTTTACCTTACCGGGCGGCACTGCAATCCCTGAAATGATTGACATTGATCACATTTCTGCGTTTAAA  >  NC_000913/3274694‑3275187

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.