BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,021,684	Δ1 bp	coding (542/609 nt)\|coding (1/243 nt)	b4556 → tatD →	hypothetical protein Mg‑dependent DNase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,021,683	0	C	.	98.7%	696.0 / ‑1.4	155	coding (541/609 nt)	b4556	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (1/1); new base . (85/68); total (86/69)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 159 total aligned reads displayed.

GGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAACCGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGC  >  NC_000913/4021608‑4021754

 gCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAAcg                                                                        <  2:2068222/76‑2 (MQ=255)

 gCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATGACCGGTTGGGTTTGCGATGAAcg                                                                        <  1:1055760/76‑2 (MQ=255)

   acacGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAAcgac                                                                      <  1:1614959/76‑4 (MQ=255)

     acGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGACTGCGCTGAA‑CGAcgc                                                                   >  2:1808673/1‑76 (MQ=255)

      cgcgAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGAcgcg                                                                  <  2:599954/76‑1 (MQ=255)

      cgcgAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATAGCGGCATTACCGGTTGGGTTTGCGATGAA‑CGAcgcg                                                                  <  1:1484301/76‑1 (MQ=255)

       gcgAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCgg                                                                 >  2:4079166/1‑76 (MQ=255)

         gAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGAc                                                               <  2:1592472/76‑1 (MQ=255)

         gAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGAc                                                               >  1:2260450/1‑76 (MQ=255)

           agagATGCGGGGGGGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTg                                                             <  2:76300/76‑1 (MQ=255)

           agagATGCGGGCGTGCGGGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTg                                                             <  2:5782552/76‑1 (MQ=255)

           agagATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTg                                                             >  1:491623/1‑76 (MQ=255)

             agagGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGa                                                           <  2:911153/76‑1 (MQ=255)

             agaTGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGa                                                           <  2:129656/76‑1 (MQ=255)

              gaTGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAg                                                          <  1:1828221/76‑1 (MQ=255)

              gaTGCAGGCGGGCGTGGCGCATGGAATTTATATCGGCCTTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAg                                                          >  2:5100368/1‑76 (MQ=255)

               aTGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGc                                                         <  1:2680553/76‑1 (MQ=255)

                tGCGGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCt                                                        <  1:4135051/76‑1 (MQ=255)

                 gCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTg                                                       >  1:1687098/1‑76 (MQ=255)

                  cAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGc                                                      <  1:5814475/76‑1 (MQ=255)

                  cAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGc                                                      <  1:4292241/76‑1 (MQ=255)

                  cAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGc                                                      <  1:4259253/76‑1 (MQ=255)

                   aGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCg                                                     >  2:4168328/1‑76 (MQ=255)

                    ggCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCgg                                                    <  2:3678735/76‑1 (MQ=255)

                    ggCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCgg                                                    <  2:1359002/76‑1 (MQ=255)

                    ggCGTGCGTGGCGCATGGAATTTATATCGGCATTACACGTTGGGCTTGCGATGAA‑CGACGCGGACTGGCGCAGCgg                                                    >  1:5733583/1‑76 (MQ=255)

                     gcgtgcgtGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGCGCTGCggg                                                   >  2:543054/1‑76 (MQ=255)

                      cgtgcgtgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGa                                                  <  2:4303321/76‑1 (MQ=255)

                      cgtgcgtgGCGCATGGAATTTATATCGGCATTACCGGTTGGCTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGa                                                  >  2:1983053/1‑76 (MQ=255)

                       gtgcgtgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGaa                                                 >  1:71338/1‑76 (MQ=255)

                       gtgcgtgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGaa                                                 >  1:5695768/1‑76 (MQ=255)

                        tgcgtgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAAc                                                <  1:1429803/76‑1 (MQ=255)

                         gcgtgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACt                                               <  2:2619150/76‑1 (MQ=255)

                         gcgtgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACt                                               >  2:4416184/1‑76 (MQ=255)

                         gcgtgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACt                                               >  1:1186378/1‑76 (MQ=255)

                          cgtgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACtt                                              >  1:2598685/1‑76 (MQ=255)

                           gtgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACttt                                             <  2:5674792/76‑1 (MQ=255)

                            tgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACtttt                                            >  1:3293362/1‑76 (MQ=255)

                              gcggATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGc                                          <  2:1906666/76‑1 (MQ=255)

                              gcgcATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGCGCTGCGGGAACtttttc                                          >  2:5177094/1‑74 (MQ=255)

                              gcgcATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGc                                          >  1:4588587/1‑76 (MQ=255)

                              gcgcAGGGAATTTAGATCGGCATTACCGGTTGGGTGTACGATGAA‑CGACGCGGACTGGAGGTGCGGGAACATGTGc                                          >  1:5746570/1‑76 (MQ=255)

                                gcATGGAATTTAGATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCg                                        <  2:1267204/76‑1 (MQ=255)

                                 cATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGt                                       >  2:1144044/1‑76 (MQ=255)

                                  aTGGAATTTATATCGGCATTACTGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGtt                                      >  1:1392046/1‑76 (MQ=255)

                                  aTGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAATTTTTGCCGtt                                      >  2:3982131/1‑76 (MQ=255)

                                  aTGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGtt                                      >  2:2703695/1‑76 (MQ=255)

                                  aTGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGtt                                      >  1:3453565/1‑76 (MQ=255)

                                   tGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTg                                     >  1:2055326/1‑76 (MQ=255)

                                    ggAGTTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGa                                    <  2:1536671/76‑1 (MQ=255)

                                     gattttATATCGGCATGACCGGTTGGGTTTGCGATGGA‑CGACGTGGACTGGAGCTGCGGGAACTTTTGCCGTCGAt                                   >  1:651845/4‑76 (MQ=255)

                                     gAATTTATATCGGCATTACCGGTTGGGTTTGCGCTGAA‑CGACGCGGACTGGGGCTGCGGGAACTGTTGCAGTTgct                                   >  1:4591413/1‑74 (MQ=255)

                                      taTTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGATCTTTTGCCGTTGAtt                                  <  2:1059547/75‑1 (MQ=255)

                                       aTTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTc                                 >  1:3044664/1‑76 (MQ=255)

                                       aTTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTc                                 <  2:3743665/76‑1 (MQ=255)

                                        tttATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTcc                                >  2:4809133/1‑76 (MQ=255)

                                        tttATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTcc                                <  2:359789/76‑1 (MQ=255)

                                           atatCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACGTTTGCCGTTGATTCcggc                             <  2:1016622/76‑1 (MQ=255)

                                           atatCGGCATTACCGGCTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCCGGAACATCAGCCGTTGATTCcggc                             >  2:1054294/1‑76 (MQ=255)

                                            tatCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGCACTTTTGCCGTTGATTCcggcg                            >  1:4276036/1‑76 (MQ=255)

                                            tatCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCcggcg                            >  2:1307773/1‑76 (MQ=255)

                                            tatCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCcggcg                            >  1:2887661/1‑76 (MQ=255)

                                            tatCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCcggcg                            <  1:581945/76‑1 (MQ=255)

                                             atCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCcggcgg                           <  1:4168329/76‑1 (MQ=255)

                                             atCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCcggcgg                           >  1:2517073/1‑76 (MQ=255)

                                             atCGGCATTACCGGGTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCcggcgg                           <  2:796182/76‑1 (MQ=255)

                                              tCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGa                          >  2:5394789/1‑76 (MQ=255)

                                              tCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGa                          >  1:4975829/1‑76 (MQ=255)

                                              tCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGa                          <  1:4682575/76‑1 (MQ=255)

                                                ggCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGaaa                        >  1:5452759/1‑76 (MQ=255)

                                                 gCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGaaaa                       >  1:550162/1‑76 (MQ=255)

                                                 gCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGaaaa                       >  2:3253888/1‑76 (MQ=255)

                                                   aTTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGGAAAAt                     >  2:700023/1‑76 (MQ=255)

                                                   aTTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAt                     >  1:5130426/1‑76 (MQ=255)

                                                    ttACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAtt                    <  1:2758365/76‑1 (MQ=255)

                                                    ttACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAtt                    >  2:2339644/1‑76 (MQ=255)

                                                    ttACCGGTTGGGGTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAtt                    >  1:5260189/1‑76 (MQ=255)

                                                     tACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTa                   >  1:1877507/1‑76 (MQ=255)

                                                     tACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTa                   >  2:4375254/1‑76 (MQ=255)

                                                      tccGGGTGGGTTTGCGAGGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTAc                  <  2:1632730/75‑1 (MQ=255)

                                                      aCCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTAc                  >  2:4940985/1‑76 (MQ=255)

                                                       ccGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACt                 <  1:2505701/76‑1 (MQ=255)

                                                        cGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTg                <  1:1472857/76‑1 (MQ=255)

                                                         ggTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCGGGCGGAAAAATTACTGa               <  2:1412269/76‑1 (MQ=255)

                                                         ggTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGa               <  2:5663970/76‑1 (MQ=255)

                                                          gtggggTGTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGAt              <  2:3341291/73‑1 (MQ=255)

                                                           ttGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATc             >  2:3709297/1‑76 (MQ=255)

                                                           ttGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATc             <  2:3075443/76‑1 (MQ=255)

                                                            tGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCg            <  2:5120673/76‑1 (MQ=255)

                                                            tGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCg            <  1:4401255/76‑1 (MQ=255)

                                                              ggTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGaa          >  2:4464991/1‑76 (MQ=255)

                                                              ggTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGaa          <  2:2598685/76‑1 (MQ=255)

                                                              ggTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGaa          <  1:4375255/76‑1 (MQ=255)

                                                                tttGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGCAAAATTACTGATCGAAAc        <  1:1307773/76‑1 (MQ=255)

                                                                 ttGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACt       >  1:1989559/1‑76 (MQ=255)

                                                                  tGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTg      >  2:4875473/1‑76 (MQ=255)

                                                                    cGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGAt    <  2:2992832/76‑1 (MQ=255)

                                                                    cGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGAt    >  1:4393827/1‑76 (MQ=255)

                                                                      aTGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATgc  >  2:2379184/1‑76 (MQ=255)

                                                                      aTGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATgc  <  2:3274234/76‑1 (MQ=255)

GGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAACCGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGC  >  NC_000913/4021608‑4021754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 10 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`