| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,968,317 | +CGT | coding (612/1170 nt) | wecB → | UDP‑N‑acetyl glucosamine ‑2‑epimerase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3968317 | 6 (0.040) | 155 (1.020) +CGT |
87/144 | 0.2 | 96.4% | coding (612/1170 nt) | wecB | UDP‑N‑acetyl glucosamine ‑2‑epimerase |
| ? | NC_000913 | 3968318 = | 6 (0.040) | coding (613/1170 nt) | wecB | UDP‑N‑acetyl glucosamine ‑2‑epimerase | |||||
Only 100 of 174 total aligned reads displayed.
AATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑G‑‑‑TCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGT > NC_000913/3968242‑3968389 | aaTCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑g < 2:1558127/76‑1 (MQ=255) aTCTTCATTACCGGTAATACAGTCATTGATGCTCTGTTATGGGTGCGTGCCCAGCTGATGAGCAGCGACAAGCT‑‑‑Gc < 1:1482379‑M1/76‑2 (MQ=255) aTCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gc < 1:4374364‑M1/76‑2 (MQ=255) aTCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gc < 1:2152808‑M1/76‑2 (MQ=255) tCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcg < 2:4875882‑M1/76‑3 (MQ=255) tCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcg < 2:2232258‑M1/76‑3 (MQ=255) cTTCATTACGGGTATGACAGTCATTGATGCACTGTTAGGGGTGGGTGACGAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgt < 1:3911755‑M1/76‑4 (MQ=255) cTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgt < 1:322951‑M1/76‑4 (MQ=255) cTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgt > 2:1608041‑M1/1‑73 (MQ=255) cTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgt < 2:2619584‑M1/76‑4 (MQ=255) cTTCATTAACGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGCTGAGCAGCGCCAAGCT‑‑‑Gcgc > 2:4316210‑M1/1‑73 (MQ=255) ttCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgtt > 1:2344287‑M1/1‑72 (MQ=255) ttCATTACCGGTAATACAGTCAGTGATGCAATGTGATGGGGGCGTGACCAGGTGATGAGCAGCGACACGCT‑‑‑Gcgtt > 2:4143418‑M1/1‑72 (MQ=255) tCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttc > 2:1962373‑M1/1‑71 (MQ=255) cATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttca > 1:467484‑M1/1‑70 (MQ=255) cATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttca < 2:3652344‑M1/76‑7 (MQ=255) aTTACCGGTAATACAGTCATTGATGCAGTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcag > 1:2105169‑M1/1‑69 (MQ=255) ttACCGGTAATACAGTCATTGAGGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcaga < 1:2224178‑M1/76‑9 (MQ=255) tACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaa < 1:2586114‑M1/76‑10 (MQ=255) aCCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaac > 1:911384‑M1/1‑66 (MQ=255) cGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactg < 1:1052487‑M1/76‑13 (MQ=255) cGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactg > 1:5669076‑M1/1‑64 (MQ=255) gTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggc < 1:309020‑M1/76‑15 (MQ=255) tAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcg > 1:3572200‑M1/1‑61 (MQ=255) tAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcg > 1:512553‑M1/1‑61 (MQ=255) tAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcg < 2:3566238‑M1/76‑16 (MQ=255) tAATACAGTCATTGATGCACTGTAATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcg < 2:1882400‑M1/76‑16 (MQ=255) aTACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggc < 2:5521139‑M1/76‑18 (MQ=255) tACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggca > 1:1570361‑M1/1‑58 (MQ=255) tACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggca > 2:611746‑M1/1‑58 (MQ=255) gacAGTCATTGATGCACTGTTGTGGGTGCGGGACCGGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggca < 2:38179‑M1/75‑19 (MQ=255) aCAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGGTGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaa < 1:1469251‑M1/76‑20 (MQ=255) aCAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaa > 1:1314966‑M1/1‑57 (MQ=255) aCAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaa < 1:96323‑M1/76‑20 (MQ=255) cggcattGCTGCACTGTTATGGGTGCGTGCCCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagcactggcggcaaat > 2:4468416‑M1/4‑55 (MQ=255) gTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcacatt > 2:252930‑M1/1‑54 (MQ=255) cATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattac > 2:5407462‑M1/1‑52 (MQ=255) ttGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattaccc > 1:4793702‑M1/1‑50 (MQ=255) tGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccg > 1:3344213‑M1/1‑49 (MQ=255) tGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccc > 2:798431‑M1/1‑49 (MQ=255) gATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgt < 1:1202179‑M1/76‑29 (MQ=255) aTGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtt < 1:2687813‑M1/76‑30 (MQ=255) gCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgttta < 1:3169392‑M1/76‑32 (MQ=255) cACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttat < 1:554063‑M1/76‑33 (MQ=255) gctGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatc < 2:4928883‑M1/75‑34 (MQ=255) aCTGTTATGGGTGCGTGACCAGGTGATGAGCCGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatc > 1:4312687‑M1/1‑43 (MQ=255) aCTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatc > 2:4076602‑M1/1‑43 (MQ=255) aCTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatc < 2:3225178‑M1/76‑34 (MQ=255) cgtttATGGGGGCGGGAACAGAGGAGGAGCAGCGACAAGCTGCGG‑‑‑TCAGAACTGGCGGCAAATTTCCCGTTGATCg < 2:5794598/73‑1 (MQ=255) gTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgac < 2:5122276‑M1/76‑37 (MQ=255) gTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgac > 1:1856566‑M1/1‑40 (MQ=255) gTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgac > 1:300145‑M1/1‑40 (MQ=255) gTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgac > 2:1103503‑M1/1‑40 (MQ=255) gTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgac > 1:4641894‑M1/1‑40 (MQ=255) tATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccc < 2:941832‑M1/76‑39 (MQ=255) tATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccc < 1:2973526‑M1/76‑39 (MQ=255) aTGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgacccc < 2:3037762‑M1/76‑40 (MQ=255) aTGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgacccc < 1:2441900‑M1/76‑40 (MQ=255) tGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactg > 1:4222197‑M1/1‑36 (MQ=255) tGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactg < 2:4222196‑M1/48‑13 (MQ=255) gCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaa < 1:4155643‑M1/76‑46 (MQ=255) cGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaa > 1:345396‑M1/1‑30 (MQ=255) gTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaa < 1:3460564‑M1/76‑48 (MQ=255) tGACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaag > 1:3875634‑M1/1‑28 (MQ=255) gACCGGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaaga < 2:369647‑M1/76‑50 (MQ=255) gACCAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgcacaaaaga > 2:409783‑M1/1‑27 (MQ=255) cAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatga > 2:781066‑M1/1‑24 (MQ=255) cAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatga > 1:518689‑M1/1‑24 (MQ=255) cAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccga < 2:3065205‑M1/65‑42 (MQ=255) cAGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccga > 1:3065205‑M1/1‑24 (MQ=255) gggtGATGGTCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttctcgaccccgataaaaagatgat < 1:5758014‑M1/75‑54 (MQ=255) aGGTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggtaaattacccgtttatcgaccccgatcaaaatatgat < 1:741221‑M1/76‑54 (MQ=255) ggTGATGAGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgatt > 1:3715209‑M1/1‑22 (MQ=255) ggTGAGGAGACGCGAGAAGCT‑‑‑Gagttcagaactggcggcagcttacccgtttatcgaccccgataaaaagatgatt < 2:3380073‑M1/76‑55 (MQ=255) tgatgaGCAGCGGCAAGCT‑‑‑GCGTTCAGAACTGGCGGAAAATTACCAGTTTATCGACCCCAATAAAAAGATGATTCt < 2:4988751/76‑1 (MQ=255) tgatgaGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattct < 1:1565988‑M1/76‑57 (MQ=255) tgatgaGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattct < 2:4962314‑M1/76‑57 (MQ=255) gatgaGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctg < 2:2732916‑M1/76‑58 (MQ=255) atgaGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctgg > 1:5688499‑M1/1‑18 (MQ=255) gaGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtg < 1:1053502‑M1/76‑61 (MQ=255) gaGCAGCGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtg < 1:1650178‑M1/76‑61 (MQ=255) agcagcGACAAGCT‑‑‑Gcgttcagaactggcggcaaattccccgtttatcgcccccgataaaaagatgattctggtga < 1:4677427‑M1/76‑62 (MQ=255) agcagcGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtga > 1:452612‑M1/1‑15 (MQ=255) cagcGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgacc < 2:2450859‑M1/76‑64 (MQ=255) agcGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccg < 1:1289678‑M1/76‑65 (MQ=255) agcGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccg > 1:4955630‑M1/1‑12 (MQ=255) gcGACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccgg > 2:4528750‑M1/1‑11 (MQ=255) gACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaag < 1:824898‑M1/57‑49 (MQ=255) gACAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaag > 2:824898‑M1/1‑9 (MQ=255) aCAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattc < 2:1497104‑M1/63‑56 (MQ=255) cAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcac > 1:5675950‑M1/1‑7 (MQ=255) cAAGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcac < 2:2344287‑M1/76‑70 (MQ=255) cAAGCG‑‑‑Gcgttcagaactggcggcaaattacccgtgtatcgaccccgataaaaagatgattctggtgaccggtcac < 2:2374479‑M1/76‑70 (MQ=255) aaGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccg < 1:5552761‑M1/70‑65 (MQ=255) aaGCT‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccg > 2:5552759‑M1/1‑6 (MQ=255) aaGCT‑‑‑Gcgttcagaactggcggaaaattacccgttcatcgaccccgataaaaacatgatcctggtcaccggtcacc > 2:4663307‑M1/1‑6 (MQ=255) t‑‑‑Gcgttcagagctggcggcaaattacccgtttatcgacccgataaaaagatgattctggtgaccggtcccaggcgt < 1:252930‑M1/76‑75 (MQ=255) t‑‑‑Gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcg > 2:3562207‑M1/1‑2 (MQ=255) gcgttcagaactggctgcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgt < 1:609799‑M1/76‑76 (MQ=255) gcgttcagaactggcggcaaattacccgtttatcgaccccgataaaaagatgattctggtgaccggtcacaggcgt < 2:1314966‑M1/76‑76 (MQ=255) | AATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCT‑‑‑G‑‑‑TCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGT > NC_000913/3968242‑3968389 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |