| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 269765 = | NA (NA) | 132 (0.830) | 81/150 | 0.5 | 29.8% | coding (300/405 nt) | yi91a | hypothetical protein |
| ? | NC_000913 | = 370983 | 311 (1.960) | coding (536/882 nt) | mhpC | 2‑hydroxy‑6‑ketonona‑2,4‑dienedioic acid hydrolase | |||||
Only 100 of 354 total aligned reads displayed.
ACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAAC > NC_000913/269690‑269837 | aCAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACt > 1:5235735/1‑76 (MQ=255)aCAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACt < 2:4121846/76‑1 (MQ=255)aCAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACt < 2:4655382/76‑1 (MQ=255) cAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTg > 1:3410980/1‑76 (MQ=255) cAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTg < 2:5306768/76‑1 (MQ=255) aaaTTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGt > 2:3826303/1‑76 (MQ=255) gaTTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTa > 1:3163127/2‑76 (MQ=255) aactGAAATCCGTGAGCTCAGGACAAAGCTACAACGTATTGAAATGGAAAATGAAATACTACAAAAGGCGACAGTa < 1:5545865/73‑1 (MQ=255) aaTTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTa < 2:4697652/76‑1 (MQ=255) aaTTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTa > 1:14184/1‑76 (MQ=255) aTTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAg < 2:865487/76‑1 (MQ=255) ttGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGa > 1:4814621/1‑76 (MQ=255) gAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGAtt > 1:4295773/1‑76 (MQ=255) gAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGAtt < 1:840713/76‑1 (MQ=255) aagccGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCa < 2:2736519/73‑1 (MQ=255) aaTCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCa > 2:4856077/1‑76 (MQ=255) ccGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAAtt > 2:4299663/1‑76 (MQ=255) cGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTg > 2:5527291/1‑76 (MQ=255) cGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTg < 2:5733743/76‑1 (MQ=255) cGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTg > 2:676056/1‑76 (MQ=255) gTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTgg > 2:550580/1‑76 (MQ=255) gTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTgg > 1:5763440/1‑76 (MQ=255) tGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGt < 2:151252/76‑1 (MQ=255) gCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAAGGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCaa < 1:2117904/76‑1 (MQ=255) cTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAAc > 2:738285/1‑76 (MQ=255) cTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAAc < 2:1886627/76‑1 (MQ=255) cTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAAc < 1:1253221/76‑1 (MQ=255) cTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACGGTAGATTCAATTGGGCAAc < 1:1303447/76‑1 (MQ=255) tCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACg > 2:3108938/1‑76 (MQ=255) tCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACCGTAGATTCAATTGGTCAACg > 2:2151166/1‑76 (MQ=255) cAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGc > 1:1587657/1‑76 (MQ=255) cAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGc < 2:3965412/76‑1 (MQ=255) cAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGc < 2:5817847/76‑1 (MQ=255) aGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCa > 1:3910718/1‑76 (MQ=255) ggAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCaa > 1:4592436/1‑76 (MQ=255) gAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAAc < 1:1005973/76‑1 (MQ=255) aaaaaGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACa < 2:4995010/76‑1 (MQ=255) aaaaaGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACa < 2:2040003/76‑1 (MQ=255) aaaaGCTACAACGTATTTAAGTGGCAAATGACATATTAAAAACGGCTACTGTAGATTCAATTGGTCAACGCCACAg < 1:4929765/76‑1 (MQ=18) aaaGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGt > 1:1879304/1‑76 (MQ=255) aaGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGtt < 2:3001787/76‑1 (MQ=255) aGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTa > 2:2227759/1‑76 (MQ=255) gCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTAt < 1:86139/76‑1 (MQ=255) cTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTAtg > 1:3180439/1‑76 (MQ=255) cTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTAtg > 1:352830/1‑76 (MQ=255) cTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTAtg > 1:633017/1‑76 (MQ=255) cTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTAtg < 1:3821323/76‑1 (MQ=255) tACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTAtgt > 1:2941581/1‑76 (MQ=255) tACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTAtgt < 1:248705/76‑1 (MQ=255) cAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGa < 1:275544/76‑1 (MQ=255) aaCGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGaa > 1:3279763/1‑76 (MQ=255) aaCGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGaa > 2:3492099/1‑76 (MQ=255) aCGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGaaa < 1:977420/76‑1 (MQ=255) aCGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGaaa > 1:4485834/1‑76 (MQ=255) cGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGaaaa > 2:2832069/1‑76 (MQ=255) tATTGAAATGGAACATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACa > 2:4233929/1‑76 (MQ=255) aTTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACAt > 2:3370160/1‑76 (MQ=255) aTTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACAt > 2:1368036/1‑76 (MQ=255) aTTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAAAGTCAATGGGTCAACGCAACAGTTATGTGAAAACAt < 2:4201397/76‑1 (MQ=21) ttGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATT‑GTCAACGCAACAGTTATGTGAAAACATgg > 2:3294235/1‑76 (MQ=255) tGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATgg > 2:2370982/1‑76 (MQ=255) tGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATgg > 2:4401498/1‑76 (MQ=255) gAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATggg > 2:3156062/1‑76 (MQ=255) aaTGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGt > 2:1240540/1‑76 (MQ=255) aTGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTGAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGtt < 2:4796108/76‑1 (MQ=255) aTGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGtt > 2:157814/1‑76 (MQ=255) tGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTg < 1:2656557/76‑1 (MQ=255) ggAAAATGAAATATTAAAAAAGGCTCCTGTAGATTCAATTGTTCAACGCAGCAGTTATGTGAAAACATGGGGTTGc < 1:783866/76‑1 (MQ=18) gAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCg > 2:3026457/1‑76 (MQ=255) gAAAATGAAATACTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCg > 2:2514780/1‑76 (MQ=255) aaaTGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGa < 2:5127091/76‑1 (MQ=255) aaTGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAg > 1:1147424/1‑76 (MQ=255) aaTGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAg > 1:5818968/1‑76 (MQ=255) aTGAAATATTAAAAAAGGCTGCTGTAGATTCAATTGGTCAGGGCAACAGTTATGTGAAAACATGGTGTTGGGGatt < 2:825620/76‑3 (MQ=14) tGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGt > 2:2675545/1‑76 (MQ=255) gAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGtt > 2:2326708/1‑76 (MQ=255) aaaTATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGttt > 2:91269/1‑76 (MQ=255) aaaTATGAAAAAATGCTACTGTAGATTCAATTGTTCAACGCAACAGTGATGTGAAAACATGGGGTTGCGGAGGttt < 1:3598309/76‑1 (MQ=11) aaTATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGtttt > 1:3738915/1‑76 (MQ=255) atatTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGttttt > 1:3969029/1‑76 (MQ=255) tatTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGtttttt > 1:5422748/1‑76 (MQ=255) tatTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGtttttt > 1:4730507/1‑76 (MQ=255) atTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTg < 2:1489006/76‑1 (MQ=40) atTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTg < 1:3700085/76‑1 (MQ=255) atTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGGTATGTGAAAACATGGGGGTGCGGAGGGTTTTTg > 2:1696727/1‑76 (MQ=14) ttAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGa > 1:2292286/1‑76 (MQ=255) ttAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGCGAAAACATGGGGTTGCGGAGGGTTTTTGa > 2:3751753/1‑76 (MQ=255) tAAAAAAGGCTACTGAAGATTCAAGTGATCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGaa > 1:1572391/1‑76 (MQ=14) aaaaaaGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAAt < 2:3660964/76‑1 (MQ=40) aaGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATgaga > 2:2587800/1‑76 (MQ=39) aaGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATgaga < 1:2060504/76‑1 (MQ=39) aGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGAc > 1:1392962/1‑76 (MQ=38) ggCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACg > 1:2197325/1‑76 (MQ=35) ggCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACg > 1:20776/1‑76 (MQ=35) cTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGGAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGaa < 1:511234/76‑1 (MQ=12) cTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGaa < 1:5022693/76‑1 (MQ=32) cTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGaa > 2:2409682/1‑76 (MQ=32) cTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGaa > 1:5156467/1‑76 (MQ=32) tACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAAc > 1:2831423/1‑76 (MQ=31) tACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAAc > 1:1752780/1‑76 (MQ=31) | ACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGGCTACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAAC > NC_000913/269690‑269837 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |