Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3943583–3943706 3943797–3943771 66–215 68 [60] [61] 63 rrlC 23S ribosomal RNA

AACAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTCCCAAGGGTA  >  NC_000913/3943776‑3943873
                      |                                                                           
aaCAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGa                        <  1:5431932/76‑1 (MQ=31)
aaCAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGa                        >  1:4076422/1‑76 (MQ=31)
 aCAGGCTGATCCCGCCCAAGAGCTCATATCGGCGGCGGGGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAg                       <  2:5168542/76‑1 (MQ=11)
 aCAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAg                       <  1:999488/76‑1 (MQ=32)
 aCAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAg                       <  1:1598896/76‑1 (MQ=32)
 aCAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAg                       <  1:3301611/76‑1 (MQ=32)
 aCAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAg                       >  1:4018763/1‑76 (MQ=32)
  cAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCCTCACATCCTGGAGc                      >  1:757578/1‑76 (MQ=21)
  cAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGc                      <  1:4476368/76‑1 (MQ=34)
   aGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCt                     >  2:3227196/1‑76 (MQ=34)
   aGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCt                     <  1:4018034/76‑1 (MQ=35)
   aGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCt                     <  1:5129275/76‑1 (MQ=35)
    ggCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCCTCACATCCTGGAGCTg                    >  2:3063076/1‑76 (MQ=21)
    ggCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACCTCCTGTAGCTg                    >  1:596873/1‑76 (MQ=255)
    ggCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTg                    <  2:2830530/76‑1 (MQ=35)
    ggCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTg                    <  2:5051008/76‑1 (MQ=35)
    ggCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTg                    <  2:2847099/76‑1 (MQ=35)
     gCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCGCGATGTCGGCTCATCACATCCTGGAGCTGa                   <  1:978149/76‑1 (MQ=25)
      cTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCCTCACCTCCTGGAGCTGaa                  >  2:4956771/1‑76 (MQ=255)
      cTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGag                  >  1:2370562/1‑75 (MQ=21)
      cTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGac                  <  2:2824962/76‑2 (MQ=25)
      cTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGaa                  >  2:3767884/1‑76 (MQ=34)
       tGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTggcg                 >  1:630063/1‑73 (MQ=21)
       tGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAg                 >  2:3406998/1‑76 (MQ=34)
       tGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAg                 <  1:2186240/76‑1 (MQ=35)
       tGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAg                 >  2:3815875/1‑76 (MQ=34)
       tGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAg                 <  1:3240598/76‑1 (MQ=35)
        gATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGCAGt                >  1:477816/1‑76 (MQ=21)
        gATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGt                >  1:4768028/1‑76 (MQ=34)
        gATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGt                >  2:1612865/1‑76 (MQ=34)
        gATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGt                <  1:2148881/76‑1 (MQ=35)
         aTACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTa               >  2:1474339/1‑76 (MQ=34)
         aTACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTa               <  2:2062664/76‑1 (MQ=35)
          tACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCGCATCCTGGAGCTGAAGTAg              <  2:5028967/76‑1 (MQ=25)
          aaCCGCCCGAGAGGTCATAGCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAg              <  2:180380/75‑1 (MQ=11)
           aCCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAgg             >  1:1069581/1‑76 (MQ=35)
           aCCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAgg             <  1:3757408/76‑1 (MQ=35)
            ccGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGt            <  1:5358815/76‑1 (MQ=35)
             cGCCCAAGAGTTTCTATCGCCGGCTGTGTTTGGCGCCTCGAGGTCGGCTCATCTCATCCTGGAGCTGAAGTCGGTc           <  2:882733/76‑1 (MQ=255)
             cGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTc           >  1:2301427/1‑76 (MQ=34)
             cGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTc           <  1:1492606/76‑1 (MQ=35)
             cGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTc           <  2:882395/76‑1 (MQ=35)
              gCCCAAGAGTTCATATCGACGGCGGTGTTTGGCCCCTCGATGTCGGCGCATCACATCCTGGAGCTGGAGTAGGTcc          >  1:1548074/1‑76 (MQ=11)
              gCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTcc          <  1:5461871/76‑1 (MQ=35)
              gCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTc           >  2:2731254/1‑75 (MQ=34)
              gCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTc           <  1:2731254/75‑1 (MQ=35)
               cccAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCATATCCTGGAGCTGAAGTAGGTccc         >  2:2681511/1‑76 (MQ=21)
               cccAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTccc         <  1:180528/76‑1 (MQ=35)
                 cAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTCCCaa       <  2:2372313/76‑1 (MQ=35)
                 cAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTCCCaa       <  2:4692835/76‑1 (MQ=35)
                 cAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTCCCaa       >  2:4097586/1‑76 (MQ=34)
                  aaGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGACGTAGGTCCCAAg      >  1:1331404/1‑76 (MQ=21)
                  aaGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTCCCAAg      >  1:2935636/1‑76 (MQ=34)
                  aaGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTCCCAAg      <  2:1951403/76‑1 (MQ=35)
                  aaGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTCCCAAg      >  1:138615/1‑76 (MQ=34)
                  aaGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTCCCAAg      >  2:2834900/1‑76 (MQ=34)
                  aaGAGTTCATATCGACGGCGGGGTTTGGCAACTCGATGTCGGCTCATCACATCCCGGAGATGAAGTAGGTCCCAAg      >  1:3727681/1‑76 (MQ=11)
                   agagTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTCCCAAgg     >  1:3618854/1‑76 (MQ=34)
                   agagTTCATATCGACGGAGGGGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTCCCAAgg     >  1:323540/1‑76 (MQ=255)
                    gagTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTCCCAAggg    >  1:3947189/1‑76 (MQ=35)
                     ggTTCATCTCGACGGCGGTGGTAGGCGCCTCTGTGTCGGCTCATCACATCCTGGAGCTGACGTAGGTCCCTAGGGt   <  2:3516801/75‑1 (MQ=11)
                     agTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTCCCAAGGGt   >  1:2586803/1‑76 (MQ=34)
                      gTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTCCCAAGGGTa  >  1:307281/1‑76 (MQ=35)
                      |                                                                           
AACAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGAGCTGAAGTAGGTCCCAAGGGTA  >  NC_000913/3943776‑3943873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: