BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,876,595	G→C	P385A (CCG→GCG)	gyrB ←	DNA gyrase subunit B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,876,595	0	G	C	99.2%	302.4 / NA	122	P385A (CCG→GCG)	gyrB	DNA gyrase subunit B
Reads supporting (aligned to +/- strand): ref base G (1/0); new base C (53/68); total (54/68)
Fisher's exact test for biased strand distribution p-value = 4.43e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 126 total aligned reads displayed.

TCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGGCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCA  >  NC_000913/3876522‑3876666

tCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTTACGCGCGCGGCgcgccg                                                                        >  1:387811/1‑76 (MQ=255)

  tGCCAGGTTGCCCTGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑Ct                                                                     <  2:2184545/76‑1 (MQ=255)

  cgCCGGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑Ct                                                                     <  1:143683/75‑1 (MQ=255)

   gCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCCTTTTCCCCGCCCGGCGcgccg‑cct                                                                    >  2:5735624/1‑74 (MQ=255)

   gCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCACTTCACGCGCGCGGCGGGgcg‑cct                                                                    >  1:3207554/1‑74 (MQ=255)

      cgTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTcac                                                                 <  1:486911/75‑1 (MQ=255)

      cgTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTcac                                                                 <  1:1382371/75‑1 (MQ=255)

      aGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTcac                                                                 <  1:716780/76‑1 (MQ=255)

      aGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGGCGCGCCG‑CCTctc                                                                 >  1:4946867/1‑74 (MQ=255)

      aGTGTGCCCGGCGGGCCCGCTAAGTCGAGCGCGCCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTcac                                                                 <  2:4894869/76‑1 (MQ=255)

         tggCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTcacggg                                                              <  2:3341886/74‑1 (MQ=255)

          tGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTcacgggc                                                             <  1:3427318/76‑1 (MQ=255)

           gCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACCCGCGCCGCCCGCCG‑CCTcaccgggc                                                            >  2:5214849/1‑74 (MQ=255)

            cccGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTcacgggcac                                                           <  2:3053750/76‑1 (MQ=255)

            cccGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTcacgggcac                                                           <  1:2915536/76‑1 (MQ=255)

            cccGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTcacgggcac                                                           <  2:4924384/76‑1 (MQ=255)

            cccGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGGCGCGGCGCCTTcaggggcg                                                            >  1:3133123/1‑75 (MQ=255)

             ccGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTcacgggcacg                                                          <  1:997559/76‑1 (MQ=255)

             ccGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTcacgggcacg                                                          <  2:1379269/76‑1 (MQ=255)

             ccGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTcacgggcacg                                                          <  1:3359059/76‑1 (MQ=255)

              cGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCCTTTCACGCGCGCGGCCCGCCC‑CCTctcgcgcacgg                                                         >  2:4267349/1‑76 (MQ=255)

               ggCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCCTTTCACCCGCCCGGCGCGCCG‑CCTcacccgcccggg                                                        >  2:1809922/1‑76 (MQ=255)

                gCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCacgggcacgggc                                                       <  1:3325848/76‑1 (MQ=255)

                gCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCG‑CCTcaccggcccgggg                                                       >  1:833969/1‑75 (MQ=255)

                  gggCGCGCTATGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGgcag                                                     <  2:1773660/75‑1 (MQ=255)

                  gggCCCGCTAAGGCGGGCGCCCCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGgcag                                                     <  2:4662139/75‑1 (MQ=255)

                  aGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGgcag                                                     <  1:173707/76‑1 (MQ=255)

                  aGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGgcag                                                     <  1:633666/76‑1 (MQ=255)

                  aGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGGCGCGCCG‑CTTCCCCGGCGCGGggag                                                     >  1:312154/1‑76 (MQ=255)

                  aGGCCCGCGAAGGCGAGCGCACCTTTACGGCGGGACCTTTCCCGCCCGCGACGCGCCG‑CCTCcccggctcgtgccg                                                     >  2:941029/1‑74 (MQ=255)

                   ggCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGgcagc                                                    <  1:4780494/76‑1 (MQ=255)

                   ggCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGgcagc                                                    <  1:5408840/76‑1 (MQ=255)

                    gCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGgcagca                                                   <  2:1593525/76‑1 (MQ=255)

                     cccGCTAAGTCGAGCGCGCCGTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCAt                                                  <  1:2761138/76‑1 (MQ=255)

                     cccGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCAt                                                  <  1:1145960/76‑1 (MQ=255)

                      ccGCTAAGTCGAGCGCACCTTTACGGCGTGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATc                                                 <  1:4595063/76‑1 (MQ=255)

                      ccGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCCCCGGCACGGGCCGCCTc                                                 >  2:5747667/1‑76 (MQ=255)

                      ccGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATc                                                 <  2:4174205/76‑1 (MQ=255)

                       cGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACCCCCGCGGCGCGCCG‑CCTCCCCGGGGCGGGGAGCGTcc                                                >  2:268859/1‑75 (MQ=255)

                         cTAAGTCGAGCGCACCTTTACGGCGGGTCATTTTACGCGCGCGGCGCGCCG‑CTTCACGGGCACGGGGCGCATCGAt                                              >  1:4813176/1‑76 (MQ=255)

                         cTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGAt                                              <  1:3337802/76‑1 (MQ=255)

                            gctCGAGCGCCCCTTTCCGGCGTGTCATTTCACGCGCGCGAGGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAAt                                           <  2:4546168/74‑1 (MQ=255)

                             gTCGAGCGCACCTTTACGGCGGGGCCATGTACCCGCGCGGCGCGCCG‑CCTCACGGGCACGGGCCGCCTCGCTacat                                          >  2:1456032/1‑73 (MQ=255)

                              tCGAGCGCCCCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCGCGGGCAGCATCGATAAttt                                         <  2:3506639/76‑1 (MQ=255)

                              tCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CCTCCCGGGCACGGGCCGCCTCGATCAttt                                         >  2:1388113/1‑76 (MQ=255)

                                 aGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CCTCCCGGGCCCGGGCCGCCTCGCTCATTTTGc                                      >  2:3415564/1‑76 (MQ=255)

                                    gcAGCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCaa                                   <  2:2578264/76‑1 (MQ=255)

                                    gcACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGGAGCATCGGTAATTTTTccca                                   >  2:2763734/1‑74 (MQ=255)

                                    gcACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCC‑CCTCACCGGCACGGGCAGCATCGATAAATTTGCCaa                                   >  1:4584681/1‑76 (MQ=255)

                                     cACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATTATTTTTCCCAc                                  >  2:770990/1‑76 (MQ=255)

                                      cccTTGACGGCGGGTCTTTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAAcc                                 <  2:5313010/75‑1 (MQ=255)

                                      aCCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CCTCACGGGCACGGGCAGCCTCGATAATTTTGCCAAcc                                 >  1:966528/1‑76 (MQ=255)

                                        cTTTCCGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCAc                               <  1:310657/76‑1 (MQ=255)

                                        cTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAAATTTTCCAACCAc                               >  1:3945827/1‑76 (MQ=255)

                                         tttACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACg                              <  1:5100032/76‑1 (MQ=255)

                                         tgtACGGCGGGTCAGTTCTCGCGCGCGACGCTCCG‑CTTCTCGGGCACGGTCAGCATCGATAATTTTGCCAACCACg                              <  2:2683431/74‑1 (MQ=255)

                                          ttACGGCGGGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCCCGa                             <  1:2058669/76‑1 (MQ=255)

                                           tccgggggGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAt                            <  2:5248059/74‑1 (MQ=255)

                                           tACGGCGGGTCCTTTCCCCCGCGCGACGCGCCG‑CCTCACCGGCCCGGGCCGCACCGATAATTTTGCCCACCAAGAt                            >  2:3279671/1‑76 (MQ=255)

                                            aCGGCGGGGCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAtt                           >  1:4781042/1‑76 (MQ=255)

                                            aCGGCGGGGCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATAGATAATTTTTGCAAACACCAta                           >  1:5248060/1‑75 (MQ=255)

                                             cggcggGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCCGCATCGATAATTTTGCCCACCCCCAttt                          >  2:5687529/1‑76 (MQ=255)

                                             cggcggGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAttt                          >  1:5562238/1‑76 (MQ=255)

                                             cggcggGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAttt                          <  2:2131406/76‑1 (MQ=255)

                                              ggcggGTCATTTCACGCGCTGGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAtttt                         <  1:1094917/76‑1 (MQ=255)

                                               gcggGTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGACACGGGCAGCATCGTTAATTTTGCCAACCACGATTTTc                        <  1:2992125/76‑1 (MQ=255)

                                                 gtgTCATTGCACGCGCGCGACGCTCCG‑CTGCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcgc                      <  1:3424111/74‑1 (MQ=255)

                                                 gggTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcgc                      >  2:2165211/1‑76 (MQ=255)

                                                  ggTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcgcg                     <  2:3708433/76‑1 (MQ=255)

                                                  ggTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcgcg                     <  1:702065/76‑1 (MQ=255)

                                                  ggTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcgcg                     <  1:4753803/76‑1 (MQ=255)

                                                  ggTCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcgcg                     >  1:5349455/1‑76 (MQ=255)

                                                    tCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTc                   >  1:3630854/1‑76 (MQ=255)

                                                    tCATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTc                   <  1:74436/76‑1 (MQ=255)

                                                    tCATTCCGCGCGCGCGGCGCGCCG‑CTGCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTc                   <  2:2075177/76‑1 (MQ=255)

                                                     cATTTCCCGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCg                  <  1:114553/76‑1 (MQ=255)

                                                     cATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATACTTTTGCCAACCCCGATTTTCGCGTCg                  >  2:303580/1‑76 (MQ=255)

                                                     cATTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCg                  >  2:3955360/1‑76 (MQ=255)

                                                      aTTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCgg                 >  2:5180598/1‑76 (MQ=255)

                                                      aTTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGCCgg                 >  2:5741103/1‑76 (MQ=255)

                                                      aTTTCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGCCCGCATCGGTAATTTTGCCAACCACGACTTTCGCGTCgg                 >  1:5824969/1‑76 (MQ=255)

                                                       tttCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGt                <  1:4423013/76‑1 (MQ=255)

                                                         tCACGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTg              <  2:1893046/76‑1 (MQ=255)

                                                           aCGCGCGCGACGCGCCG‑CTTNNCGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTgtg            >  1:1223366/1‑74 (MQ=255)

                                                           aCGCGCGCGACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTggg            >  2:1770280/1‑76 (MQ=255)

                                                             gcgcgcgACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTggggt          >  1:4238110/1‑74 (MQ=255)

                                                               gcgcgACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGtttt        >  1:5508334/1‑76 (MQ=255)

                                                               gcgcgACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGtttt        <  1:499488/76‑1 (MQ=255)

                                                                cgcgACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTc       >  1:2424897/1‑76 (MQ=255)

                                                                 gcgACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGGTGGGGTTTcc      >  1:956277/1‑76 (MQ=255)

                                                                 gcgACGCACCG‑CTTAACGGGCACGGGCAGCATCGATAATTTTGTCAACCACGACTTTCGCGTCGGGTGGGGGTTcc      >  1:2692882/1‑76 (MQ=255)

                                                                  cgACGCTCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCca     <  1:336399/76‑1 (MQ=255)

                                                                  cgACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGGTGGGGTTTTca     >  1:2068917/1‑76 (MQ=255)

                                                                  ccaCGCGCCG‑CTTCACGGGCACGGTCAGCATCAATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCca     <  1:5722157/74‑1 (MQ=255)

                                                                   gACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcag    >  2:3027060/1‑76 (MQ=255)

                                                                   gACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGGTGGGTTTTTcag    >  2:655287/1‑76 (MQ=255)

                                                                   gACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGGTGGGTTTTCcag    >  1:1857070/1‑76 (MQ=255)

                                                                   gACGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACCACTTTCGCGCCGGTCGGGGTTTCcac    >  2:1032276/1‑75 (MQ=37)

                                                                    aCGCGCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagc   >  1:1437569/1‑76 (MQ=255)

                                                                     cgcgCCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagca  <  1:4730615/76‑1 (MQ=255)

TCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGGCG‑CTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCA  >  NC_000913/3876522‑3876666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 4 ≤` `ATCG/ATCG` `< 10 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`