Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 2,766,473 | A→G | D248G (GAT→GGT) | b2632 → | putative GTP‑binding protein |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,766,473 | 0 | A | G | 99.1% | 311.7 / NA | 116 | D248G (GAT→GGT) | b2632 | putative GTP‑binding protein |
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (46/69); minor base T (0/1); total (46/70) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 116 total aligned reads displayed.
TACTGCAACATCCCTTTCGGACATGGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGATACCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAGGCCGTGC > NC_000913/2766404‑2766544 | tACTGCAACATCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCAt > 2:1266174/1‑76 (MQ=255) tACTGCAACATCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCAt > 1:4794514/1‑76 (MQ=255) cTGCAACATCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATAc > 1:1294711/1‑76 (MQ=255) tGCAACATCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACt < 1:1750000/76‑1 (MQ=255) tGCAACATCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACt > 1:1342234/1‑76 (MQ=255) tGCAACATCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACt < 2:4859376/76‑1 (MQ=255) gCAACATCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTc < 2:2675459/76‑1 (MQ=255) gCAACATCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTc > 1:3841074/1‑76 (MQ=255) gCAACATCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTc > 1:363675/1‑76 (MQ=255) caccATCCCTTTCGATCACCGGTAGCCCGGGAGCAGGCACGTGCCGATTTCGGTGAATCCGTAGGTGCCATACTCg < 1:2133798/73‑1 (MQ=255) cAACATCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCg > 1:3063847/1‑76 (MQ=255) cAACATCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCg > 1:522012/1‑76 (MQ=255) aaCATCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGa > 1:1215049/1‑76 (MQ=255) aCATCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGAt < 2:5437396/76‑1 (MQ=255) aCATCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGCAGGCGCCATACTCGAt > 2:761070/1‑76 (MQ=255) cATCCCTTTCGAGCAGCGGTAGCCCGGGAGCGGGCACGTGACGATTTCGGTGAAGCCGTAGGTGCCATACTCGATa < 2:619725/76‑1 (MQ=255) cATCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATa < 2:3063847/76‑1 (MQ=255) tCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACg < 1:640122/76‑1 (MQ=255) tCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACg < 2:785076/76‑1 (MQ=255) tCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACg > 2:3723999/1‑76 (MQ=255) tCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACg > 2:4660875/1‑76 (MQ=255) ccTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGt > 2:2730912/1‑76 (MQ=255) aacggTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCttt < 2:3013011/73‑1 (MQ=255) aacggTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCttt > 1:5414753/4‑76 (MQ=255) aacggTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCttt < 1:4139241/73‑1 (MQ=255) acggTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTc < 1:4651457/74‑1 (MQ=255) cggTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTcc < 2:4262383/75‑1 (MQ=255) cggTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCCTTcc > 2:4832174/2‑76 (MQ=255) ggTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTccc < 1:3960648/76‑1 (MQ=255) ggTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTccc > 1:1023210/1‑76 (MQ=255) ggaGCCCGGGAGCGGGCACGGGGCGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTcccc < 2:5439967/74‑1 (MQ=255) ggaGCCAGGGAGAGTGCGCGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTcccc < 2:5449814/74‑1 (MQ=255) gTAGCCCGGGAGCAGGCCCGTGACGATTTCGGTGACACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTcccc < 2:822786/76‑1 (MQ=255) aGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCtt < 1:3517744/76‑1 (MQ=255) aGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCtt < 1:1021666/76‑1 (MQ=255) aGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCtt < 2:4757363/76‑1 (MQ=255) aGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCtt < 2:4754514/76‑1 (MQ=255) gCCCGGGAGCAGGCACGGGACGATTTCGGGGAAACCGGAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTa < 2:5671752/76‑1 (MQ=255) cccGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCGTTAt < 1:4531345/76‑1 (MQ=255) cccGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTAt < 1:1390165/76‑1 (MQ=255) cccGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTAt < 2:2287937/76‑1 (MQ=255) ccGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGAGACGGTAAGCACCTTTCCCCTTAtt > 1:4926541/1‑76 (MQ=255) cGGGAGCAGGCACGTGACGATTTCGGTGAAGCCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTc < 2:2930036/76‑1 (MQ=255) gggAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTcc < 2:3444301/76‑1 (MQ=255) gggAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTcc > 1:2022430/1‑76 (MQ=255) ggAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTccc < 2:247376/76‑1 (MQ=255) ggAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTccc > 1:1078102/1‑76 (MQ=255) ggAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTccc < 1:3025800/76‑1 (MQ=255) ggAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTccc < 1:596157/76‑1 (MQ=255) ggAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCAATACTCGATACGGTAAGCACCTTTCCCCTTATTccc > 1:1123617/1‑76 (MQ=255) aGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGc < 1:3845850/76‑1 (MQ=255) aGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTCATTCCCGc > 2:5643780/1‑76 (MQ=255) gCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGcc > 2:4968663/1‑76 (MQ=255) cAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGccc < 1:2730912/76‑1 (MQ=255) aGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGcccc < 2:2345378/76‑1 (MQ=255) aGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGcccc < 1:2494974/76‑1 (MQ=255) aGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGcccc < 1:492705/76‑1 (MQ=255) aGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGcccc > 1:1133777/1‑76 (MQ=255) ggCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCg < 2:522012/76‑1 (MQ=255) ggCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCg < 1:3991812/76‑1 (MQ=255) gCACGTGACGATTTCGGTGAACCCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCgg < 2:1348188/76‑1 (MQ=255) gCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCgg < 2:357846/76‑1 (MQ=255) aCGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCAGCTTTCCCCTTATTCCCGCCCCGGTg > 1:2741252/1‑76 (MQ=255) aCGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTg < 1:2784750/76‑1 (MQ=255) aCGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTg > 2:3322928/1‑76 (MQ=255) aCGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTg > 2:3530363/1‑76 (MQ=255) aCGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTg < 1:1477491/76‑1 (MQ=39) cGTGACGATTTCGGTGAACCCGTAGGTGCCATCCTCGATACGGTAAGCACCTTTCCCCTTATCCCCGCCCCGGTGc < 1:1795463/76‑1 (MQ=255) cGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGc < 1:1489420/76‑1 (MQ=38) gTGACGATTTCGGTGAGACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCg < 1:643222/76‑1 (MQ=38) gTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCgg < 1:1228438/72‑1 (MQ=255) gTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCgg > 2:1228438/1‑72 (MQ=255) gTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCg < 2:1105811/76‑1 (MQ=38) gTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCg < 1:999747/76‑1 (MQ=38) gACGATTTCGGTGAAGCCGTATGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGa < 1:509584/76‑1 (MQ=38) gACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGa > 2:4137587/1‑76 (MQ=38) gACGATTGCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGa < 2:1994620/76‑1 (MQ=37) aCGATTTCGGTGAAACCGTAGGTGCCATACTCGCTACGGTAAGCACCCTTCCCCTTATTCCCGCCCCGGTGCggcc > 2:5414503/1‑74 (MQ=255) aCGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGAc < 2:2159228/76‑1 (MQ=255) aCGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGAc < 1:4536473/76‑1 (MQ=255) cGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGAcc < 1:3328342/76‑1 (MQ=38) gATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCa < 1:3530338/76‑1 (MQ=255) gATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCa > 1:5227423/1‑76 (MQ=38) gATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGCGCGGACCa > 1:5684683/1‑76 (MQ=255) aTTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCat < 1:1034580/76‑1 (MQ=39) ttccGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCatt < 1:5251869/73‑1 (MQ=38) ttCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCatta < 2:1215049/76‑1 (MQ=255) tCGGTGCAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCattat < 1:2164792/76‑1 (MQ=39) tCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCattat > 1:3063569/1‑76 (MQ=39) gggTGAACCCGTAGTTGCCATACTCGAGACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCattatt < 2:2777379/75‑1 (MQ=38) tGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAg > 1:4957658/1‑76 (MQ=39) aagccGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAGGc < 2:468362/73‑1 (MQ=38) aaaCCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAGGc < 1:2388854/76‑1 (MQ=255) aaaCCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAGGc > 1:2797161/1‑76 (MQ=39) aaCCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAGGcc < 1:3910492/76‑1 (MQ=255) cccGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACAATTATTCCGGCCg > 1:5444604/2‑76 (MQ=38) aCCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAGGCCg > 1:4957843/1‑76 (MQ=38) aCCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAGGCCg > 1:5420669/1‑76 (MQ=38) ccGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAGGCCGt < 1:1624002/76‑1 (MQ=255) gTAGGTGCCATACTCGATACGGTAAGCCCCTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAGGCCGTGc < 2:2003104/76‑1 (MQ=37) | TACTGCAACATCCCTTTCGGACATGGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGATACCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAGGCCGTGC > NC_000913/2766404‑2766544 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |