| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,980,918 | 2 bp→CG | coding (348‑349/1236 nt) | aslB → | putative arylsulfatase regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,980,918 | 0 | G | C | 99.4% | 430.8 / ‑4.9 | 158 | W116C (TGG→TGC) | aslB | putative arylsulfatase regulator |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (81/76); minor base T (1/0); total (82/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01 | |||||||||||
| * | NC_000913 | 3,980,919 | 0 | C | G | 99.4% | 428.2 / NA | 158 | P117A (CCG→GCG) | aslB | putative arylsulfatase regulator |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base G (81/75); minor base T (0/1); total (82/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 158 total aligned reads displayed.
TATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCA > NC_000913/3980850‑3980986 || tatGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTtc < 1:2742936/76‑1 (MQ=255) atGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTtct < 2:4329527/76‑1 (MQ=255) tGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGATGAATGGTGCGCGTTtctc < 2:5041113/76‑1 (MQ=255) tGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTtctc < 1:1914286/76‑1 (MQ=255) tGGTGCGGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTtctc < 2:1445094/76‑1 (MQ=255) gTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTcgc < 2:1690522/76‑1 (MQ=255) gTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTcgc < 2:4285969/76‑1 (MQ=255) gCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCgg < 1:5156375/76‑1 (MQ=255) gCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCgg > 1:5753024/1‑76 (MQ=255) cTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGa > 1:4455123/1‑76 (MQ=255) cTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGa < 1:4047138/76‑1 (MQ=255) cTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGa < 2:2890416/76‑1 (MQ=255) cTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGa < 2:4024482/76‑1 (MQ=255) cTGGCAGGAAGATAAGCAACAGCTTCCAGACTAACGGCGTGCTGATGGGTGACGAATGGTGCGCGTTTCTCGCGGa > 1:2547902/1‑76 (MQ=255) atGGCAGGAAGATAAGTAACAGCTTCCAGACTAGCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGa < 1:4277401/75‑1 (MQ=255) tGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTTCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAg < 1:116044/76‑1 (MQ=255) tGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAg < 2:1415717/76‑1 (MQ=255) tGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAg > 2:724280/1‑76 (MQ=255) ggCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCgg > 1:2562041/1‑73 (MQ=255) ggCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCgg < 2:2562041/73‑1 (MQ=255) ggCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGc < 1:2100269/76‑1 (MQ=255) gCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGca < 2:41501/76‑1 (MQ=255) gCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGca > 1:181693/1‑76 (MQ=255) cAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGcat > 1:1711568/1‑76 (MQ=255) cAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGcat < 2:2076052/76‑1 (MQ=255) aGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGcatc > 1:4318298/1‑76 (MQ=255) aGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGcatc > 1:1042562/1‑76 (MQ=255) gAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGcatcat > 1:4993684/1‑76 (MQ=255) aaGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAtt > 2:2591992/1‑76 (MQ=255) aaGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAtt > 1:4310456/1‑76 (MQ=255) aaGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAtt < 1:2345060/76‑1 (MQ=255) aGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCCTCAttt > 2:4286720/1‑76 (MQ=255) aGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAttt < 1:2681388/76‑1 (MQ=255) aGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAttt > 2:3070250/1‑76 (MQ=255) aGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAttt > 1:2228270/1‑76 (MQ=255) gATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGCGCATCAtttt > 2:2881285/1‑76 (MQ=255) gATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAtttt > 2:3954892/1‑76 (MQ=255) aTAAGTACCAGCTTCCAGACTCACGGCGTGCTGCTGGATGCCGCATGGTGCGCGTTTCCCGCGGAGCATCATTTTc > 1:944932/1‑76 (MQ=255) aTAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCCTCAttttt > 2:159637/1‑75 (MQ=255) aTAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTc > 1:915130/1‑76 (MQ=255) tcaGTGACAGCCGCCAGACTAAGTGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCt < 2:676290/74‑1 (MQ=255) tAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCt > 2:3359170/1‑76 (MQ=255) tAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGATTCTCGCGGAGCATCATATTCt > 1:4681488/1‑76 (MQ=255) aaGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCtt < 1:4186703/76‑1 (MQ=255) aaGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCtt > 1:5530954/1‑76 (MQ=255) aGTAACAGCTTCCAGACTACCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCttg < 1:4926542/76‑1 (MQ=255) aGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCttg < 2:2537518/76‑1 (MQ=255) gTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCttgt < 1:843189/76‑1 (MQ=255) tAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCttgtt > 1:3000108/1‑76 (MQ=255) aaCAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCttggtg > 1:4083399/1‑76 (MQ=255) cAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGt < 2:1179434/76‑1 (MQ=255) cAGCTTCCAGACTAACGGCGTGCTGCGGGATGCCGAATGGTGCGCGTTTCTAGCGGAGCATCATTTTCTTGTTGGt > 1:4403298/1‑76 (MQ=255) aGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGCTTCTCGCGGAGCATCATTTTCTTGTTGGtt > 2:3113637/1‑76 (MQ=255) gCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGttt < 2:4408160/76‑1 (MQ=255) tCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATc < 2:1046644/76‑1 (MQ=255) tCCAGACTAACGGCGTGCGGCTGGATGACGAATGGTGCGCGTTTCTCGCGGTGCATCATTTTCTCGTTGGCTTATc > 2:4333699/1‑76 (MQ=255) ccAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCg < 2:1059645/76‑1 (MQ=255) aGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCt > 1:1924667/1‑76 (MQ=255) aGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCt < 1:5633435/76‑1 (MQ=255) aGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTATATCGCt > 1:4380140/1‑76 (MQ=255) aCTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTgg > 1:4208951/1‑76 (MQ=255) aCTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTgg > 2:5848565/1‑76 (MQ=255) tAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGAt < 2:1770648/76‑1 (MQ=255) tAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGAt < 1:2398948/76‑1 (MQ=255) tAACGGCGTGCTGCTGGATGACGAATGGAGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGag > 2:3770682/1‑75 (MQ=255) aaCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATg > 2:5696120/1‑76 (MQ=255) aaCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATg < 2:2708406/76‑1 (MQ=255) aCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCtt < 1:4730353/56‑1 (MQ=255) aCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCtt > 2:4730352/1‑56 (MQ=255) aCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATgg < 1:5726249/76‑1 (MQ=255) ggCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGcc > 1:3198472/1‑76 (MQ=255) ggCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGcc > 1:1506418/1‑76 (MQ=255) ggCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGcc > 1:2383788/1‑76 (MQ=255) gCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGccc > 2:2511490/1‑76 (MQ=255) gTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGc > 2:5172481/1‑76 (MQ=255) gTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGATGTATGTCACGc > 1:1781559/1‑76 (MQ=255) atgctgcTGGATGACGAATGGGGCGCGGTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGc > 2:1928890/2‑76 (MQ=255) tgctgcTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGcc > 1:3053599/1‑76 (MQ=255) gctgctGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCt < 1:1023564/76‑1 (MQ=255) gctgctGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCt > 2:3577654/1‑76 (MQ=255) gctgctGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCt < 2:3407953/76‑1 (MQ=255) tgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTga > 2:45548/1‑76 (MQ=255) tgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTga > 1:1409573/1‑76 (MQ=255) tgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTga < 2:4084279/76‑1 (MQ=255) gtctgTATTACGAATGGTTCTCGTGTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTga < 2:4060311/74‑1 (MQ=255) ctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTgaga > 2:1413341/1‑76 (MQ=255) tgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGAt > 1:3344733/1‑76 (MQ=255) gATGACGAATGGTGCGCGTTTCTCGCGGCGCATCCTTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGGGCTcc > 2:5334776/1‑76 (MQ=255) gATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATcc > 2:5282026/1‑76 (MQ=255) aTGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCca < 2:3344733/76‑1 (MQ=255) tGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTCTCGCTGGATGGCGCGCCTGAGATCcac < 1:5282225/76‑1 (MQ=255) gACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCcaca < 2:1160819/76‑1 (MQ=255) gACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCcaca < 1:1223470/76‑1 (MQ=255) gACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCcaca < 1:37212/76‑1 (MQ=255) aCGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCAcaa > 1:4834866/1‑76 (MQ=255) gAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCAcaatc > 1:246309/1‑76 (MQ=255) gAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCAcaatc < 1:2028187/76‑1 (MQ=255) gaTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCAcaatca < 2:544642/75‑1 (MQ=255) aaTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCAcaatca > 1:2348674/1‑76 (MQ=255) aaTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCAcaatca < 2:911380/76‑1 (MQ=255) || TATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCA > NC_000913/3980850‑3980986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |