| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,627,142 | +G | intergenic (‑24/+23) | yhiH ← / ← yhiI | putative ATP‑binding component of a transport system, fragment 1/putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,627,140 | 1 | . | G | 99.2% | 349.5 / ‑3.7 | 133 | intergenic (‑22/+25) | yhiH/yhiI | putative ATP‑binding component of a transport system, fragment 1/putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base G (77/55); total (77/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 147 total aligned reads displayed.
AATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGC‑GGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCT > NC_000913/3627065‑3627210 | aaTATCGAGAGTGATCTTGTACAGCGCCACGGTTTTTCCATAATTCTGTCTCCCTCCCGCCAGTTGCGCGACAGGc < 1:868294/76‑1 (MQ=255)aaTATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGc < 1:3995708/76‑1 (MQ=255) atatCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGC‑g > 1:1713364/1‑76 (MQ=255) tatCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACcggc‑gg > 2:1021309/1‑76 (MQ=255) tatCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGC‑gg < 1:2266492/76‑1 (MQ=255) atCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGC‑ggg < 1:1687901/76‑2 (MQ=255) tCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGC‑ggga > 1:4169188/1‑74 (MQ=255) cGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGC‑gggac > 2:1939104/1‑73 (MQ=255) gagTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACGGGCGGGACggg > 1:2861187/1‑76 (MQ=255) gagTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACggg > 1:3546550/1‑76 (MQ=255) gagTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCAACAGGCGGGACggg < 1:4862452/76‑1 (MQ=255) agTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGcgggacggga < 1:4119927/76‑1 (MQ=255) agTGATATTGTACAGCGCAACGTTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGcgggacggga < 2:4419580/76‑1 (MQ=255) gTGATATTGTTCAGCGCAAGGGTTTTTCCATAATGCGGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGaa < 2:180545/76‑1 (MQ=255) gATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAAcc < 1:3311463/76‑1 (MQ=255) gATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACACGCGGGCCGGGAAcc > 2:515563/1‑76 (MQ=255) atatTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCa < 1:3478267/76‑1 (MQ=255) atTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGt > 2:3975009/1‑76 (MQ=255) tGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTc < 1:1897114/76‑1 (MQ=255) tGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTc > 1:3966308/1‑76 (MQ=255) gTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCCGTGcc > 1:451407/1‑76 (MQ=255) ttCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCCGTTccc > 2:4683122/1‑75 (MQ=255) ttCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTccc > 2:3245267/1‑75 (MQ=255) ttCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCa > 1:1967865/1‑76 (MQ=255) tgaGCGCAAGGGGTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAg < 2:2408811/74‑1 (MQ=255) tCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTcccg > 1:2347343/1‑74 (MQ=255) gcgcAACGGTTTTTCCATAATGCTGGCTCACGCCCGACAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATg > 2:2168560/1‑76 (MQ=255) cgcAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCCGTTCCAGATGc > 1:2706578/1‑76 (MQ=255) gcAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGGAGCAGTTCCAGATGCg > 1:1800900/1‑76 (MQ=255) gcAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCg > 1:4836164/1‑76 (MQ=255) aCGGTTTTTCCATAATGCTGGCTCACGCCCGCCCGTTGCGCGACAGGCGGGACGGGGACCAGTTCCAGATGCGTct > 2:2557911/1‑75 (MQ=255) aCGGTTTTTCCATAAGGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCa < 1:1154392/76‑1 (MQ=255) cGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCCGTTCCAGATGCGTCAt > 2:3672184/1‑76 (MQ=255) cGGGTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCAt < 2:2362208/76‑1 (MQ=255) ggTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCAtt > 2:767887/1‑76 (MQ=255) ggTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCCCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCCtt > 2:2553123/1‑76 (MQ=255) tttttCCATAATGCTGGCTCGCGCCCGCCCGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGc < 2:4241204/76‑1 (MQ=255) tttttCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGc < 2:2646623/76‑1 (MQ=255) tttttCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGc < 1:737232/76‑1 (MQ=255) gttttCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGAAGGGAACCAGTTCCAGATGCGTCATTGc < 2:2657261/75‑1 (MQ=255) ttttCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCg < 2:3144198/76‑1 (MQ=255) tttCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCgg < 1:2745209/76‑1 (MQ=255) ttCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGc > 1:2062244/1‑76 (MQ=255) tgccATAATGCTGGCTCACGCCCGCCAGTTGCGCGACATGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGc < 1:4344507/74‑1 (MQ=255) cATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAAc < 1:391326/76‑1 (MQ=255) aTAATGGTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAAcc < 2:4529242/76‑1 (MQ=255) aTAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAAcc > 1:4342308/1‑76 (MQ=255) tAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGGCGGGAACCAGGTCCAGAAGCGGCCGTCCGGCAACCt > 2:124757/1‑76 (MQ=255) tAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCt > 1:4602830/1‑76 (MQ=255) aaTGCTGGCTCCCGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTc < 1:4234101/76‑1 (MQ=255) aaTGCTGGCTCACGCCCGCCAGTTGCGCGACCGGCGGGACGGGCCCCAGTTCCCGATGCGTCCTCGCGGCCAcccc > 2:6426/1‑74 (MQ=255) aTGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTca < 2:4517429/76‑1 (MQ=255) tGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTcac > 1:707139/1‑76 (MQ=255) tGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCCcac > 2:1713575/1‑76 (MQ=255) gcgggCTCGCGGCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAGCCTcacc < 2:4104072/73‑1 (MQ=255) gCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTc < 1:4529067/59‑1 (MQ=255) gCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTc > 2:4529067/1‑59 (MQ=255) gCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTcacc < 1:599320/76‑1 (MQ=255) cTGGCTCACGGCCGCCAGGTGCGGGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTcacca < 2:3818014/76‑1 (MQ=255) tGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTcaccac < 1:836485/76‑1 (MQ=255) ggCTCTCGCTCGCCAGTTGCGCGGCAGGCGGGCCGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACg < 2:536614/76‑1 (MQ=255) gCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGCTCCGTCCTTGCGCCAACCTcaccacca > 2:4606717/1‑74 (MQ=255) cTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAg < 1:3192005/76‑1 (MQ=255) tCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAgg > 1:232820/1‑76 (MQ=255) tCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAgg > 1:1682415/1‑76 (MQ=255) tCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAgg > 1:1248091/1‑76 (MQ=255) tCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAgg > 1:467468/1‑76 (MQ=255) ccACGCCCGCTATTTACGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAgg < 1:94146/75‑1 (MQ=255) cACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGgt > 1:2263490/1‑76 (MQ=255) ccgcccgccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGgtc < 1:4535122/75‑1 (MQ=255) aCGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGgtc > 2:1438534/1‑76 (MQ=255) cgcccgccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGgtcg > 1:1973968/1‑76 (MQ=255) gcccgccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGgtcgt > 1:2486042/1‑76 (MQ=255) gcccgccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCCCACCCCGAGggcgt > 2:1989499/1‑76 (MQ=255) cccgccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGgtcgtc < 1:4084220/76‑1 (MQ=255) cccgccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGgtcgtc > 1:43135/1‑76 (MQ=255) cccgccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGgtcgtc < 1:204044/76‑1 (MQ=255) cgccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCCACCTCACCACCAGGTCGTCAg > 2:3884023/1‑76 (MQ=255) cgccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCCCGAGGCCGCCAg > 2:1063079/1‑76 (MQ=255) gccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAgg > 2:2340038/1‑76 (MQ=255) gccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAgg < 1:1408904/76‑1 (MQ=255) gccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAgg > 1:4791267/1‑76 (MQ=255) gccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGCCGTCAgg > 2:3994618/1‑76 (MQ=255) ccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGc > 1:3829465/1‑76 (MQ=255) cAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGcc > 1:1303180/1‑76 (MQ=255) cgTTGCGCGACCGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCa < 2:2183905/75‑1 (MQ=255) cgTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCa < 2:4130184/75‑1 (MQ=255) aGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCa > 2:2815805/1‑76 (MQ=255) aGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCa > 1:2331190/1‑76 (MQ=255) gTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCAc > 1:2809242/1‑76 (MQ=255) gTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGCCGTCAGGcccc > 1:3646771/1‑74 (MQ=255) ttGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACg < 1:4171614/76‑1 (MQ=255) gcgcGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGa > 1:3300735/1‑76 (MQ=255) gcgcGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGCCAGGCCACGGa > 2:1477324/1‑76 (MQ=255) cgcgACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGaa > 2:2860351/1‑76 (MQ=255) gcgACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAg < 1:2597204/76‑1 (MQ=255) gACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGCGGCCGTCAGGCCCCGGAAGtc > 2:1215781/1‑75 (MQ=255) gACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCCCGGAAGtt > 2:4458210/1‑76 (MQ=255) gACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGtt > 1:2959970/1‑76 (MQ=255) cAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGttct < 1:4698327/76‑1 (MQ=255) | AATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGC‑GGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCT > NC_000913/3627065‑3627210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |