BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,005,601	+C	coding (237/282 nt)	b4568 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,005,600	1	.	C	98.4%	323.4 / ‑5.6	125	G79A (GGC→GCC)	b4568	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (1/0); major base C (68/54); minor base A (2/0); total (71/54)
Fisher's exact test for biased strand distribution p-value = 5.04e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 130 total aligned reads displayed.

GGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GG‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTG  >  NC_000913/4005525‑4005670

ggATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑gg                                                                         >  2:3237668/1‑76 (MQ=255)

  aTTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GG‑cc                                                                      >  2:1402666/1‑75 (MQ=255)

    tGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GG‑cctg                                                                    <  2:2283552/76‑4 (MQ=255)

          gctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTAtctc                                                               >  1:2860786/1‑76 (MQ=255)

          gctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTAtctc                                                               >  2:1715383/1‑76 (MQ=255)

           ctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATctct                                                              <  1:3852619/76‑1 (MQ=255)

           ctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATctct                                                              <  2:3129712/76‑1 (MQ=255)

            ttGGCGTGCATTTGATAATCGAAAAAATGGTCTGGTTGCATCCGCTGATTATGGTGGGGGGT‑GGCCTGTATCTctg                                                             <  2:4773426/76‑1 (MQ=255)

            ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTctg                                                             >  2:1694007/1‑76 (MQ=255)

             tgtccTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTctgc                                                            <  1:4539610/73‑1 (MQ=255)

             tGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTctgc                                                            <  2:3016873/76‑1 (MQ=255)

              ggCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACTCTGATTATGGTGGGCGGT‑GGCCTGTATCTctgct                                                           >  1:4605058/1‑76 (MQ=255)

              ggCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTctgct                                                           >  2:4508984/1‑76 (MQ=255)

               gCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTctgctg                                                          >  1:4203049/1‑76 (MQ=255)

               gCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTctgctg                                                          <  2:420502/76‑1 (MQ=255)

                ccTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTgg                                                         >  1:1639966/1‑76 (MQ=255)

                ccTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTgg                                                         >  1:2554408/1‑76 (MQ=255)

                 cTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTggg                                                        >  1:574686/1‑75 (MQ=255)

                 cTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGa                                                        >  1:1880748/1‑76 (MQ=255)

                 cTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGa                                                        >  1:2355708/1‑76 (MQ=255)

                 cTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGa                                                        <  2:316849/76‑1 (MQ=255)

                  tGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGAt                                                       >  2:2361048/1‑76 (MQ=255)

                  tGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGG‑GGCCTGTATCTCTGCTGGAt                                                       >  2:4421031/1‑76 (MQ=255)

                   gCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATg                                                      <  1:620312/76‑1 (MQ=255)

                   gCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGAGGT‑GGACTGTATCTCTGCTGGATg                                                      >  1:1174222/1‑76 (MQ=255)

                    cATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATgg                                                     >  2:773925/1‑76 (MQ=255)

                    cATTTGATCATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATgg                                                     >  2:4141152/1‑76 (MQ=255)

                     aTTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATggg                                                    >  1:1034854/1‑76 (MQ=255)

                     aTTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATggg                                                    <  2:1039362/76‑1 (MQ=255)

                        tGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTa                                                 <  1:2060298/76‑1 (MQ=255)

                         gATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTAc                                                <  1:3061513/76‑1 (MQ=255)

                           ttATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCa                                              <  2:669291/76‑1 (MQ=255)

                           ttATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGATGGATGGGTTACCa                                              >  2:1977096/1‑76 (MQ=255)

                              tCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGAt                                           <  2:1129219/76‑1 (MQ=255)

                              tCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGCTACCAGAt                                           >  2:4631613/1‑76 (MQ=255)

                               cGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATg                                          >  2:1239189/1‑76 (MQ=255)

                               cGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATg                                          >  2:2605619/1‑76 (MQ=255)

                                gAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGc                                         >  1:3056059/1‑76 (MQ=255)

                                gAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGc                                         <  1:537873/76‑1 (MQ=255)

                                gAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGc                                         >  1:3107958/1‑76 (MQ=255)

                                 aaaaaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCt                                        <  2:216013/76‑1 (MQ=255)

                                 aaaaaaTGGCCTGGCTGCATACGCTGATTATGGTGAGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCt                                        <  1:10520/76‑1 (MQ=255)

                                   aaaaTGGCGTGGGGGGGTACGCTGATTATGGTGGGGGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAc                                      <  2:279261/76‑1 (MQ=255)

                                   aaaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAc                                      <  1:689836/76‑1 (MQ=255)

                                   aaaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAc                                      <  2:2353715/76‑1 (MQ=255)

                                   aaaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAc                                      <  1:1221623/76‑1 (MQ=255)

                                    aaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGCTGCTACg                                     >  2:704962/1‑76 (MQ=255)

                                    aaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACg                                     <  1:2450453/76‑1 (MQ=255)

                                     aaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgt                                    <  1:4696055/76‑1 (MQ=255)

                                      aTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtg                                   >  1:2677189/1‑76 (MQ=255)

                                        ggCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtggt                                 <  2:3721350/76‑1 (MQ=255)

                                         gCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtggtg                                >  2:4298706/1‑76 (MQ=255)

                                           cTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCa                              >  2:4271172/1‑76 (MQ=255)

                                           cTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCa                              >  2:2433053/1‑76 (MQ=255)

                                           cTGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGCTACCAGATGCTACGTGGTGCa                              >  2:4267647/1‑76 (MQ=255)

                                            tGGGTGCATACGCGGATTAGGGTGGGCGGG‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCAc                             <  2:4776777/76‑1 (MQ=255)

                                            tGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCAc                             >  2:2167123/1‑76 (MQ=255)

                                            tGGCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCAc                             >  2:646738/1‑76 (MQ=255)

                                             ggCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACt                            <  2:2587623/76‑1 (MQ=255)

                                             ggCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACt                            >  1:787217/1‑76 (MQ=255)

                                              gCTGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTg                           >  2:3307050/1‑76 (MQ=255)

                                              gCTGCACACGCTGATTATGGTGGGCGGTCGC‑CTGTACCTCCGCCGGATGGGTTACCAGATCCAACGTGGTGCACTg                           >  2:3958614/1‑76 (MQ=255)

                                                tGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaa                         >  1:464782/1‑76 (MQ=255)

                                                tGCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaa                         >  1:819722/1‑76 (MQ=255)

                                                 gCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGCTGGGTTACCAGATGCTACGCGGTGCACCGaaa                        >  2:1777450/1‑76 (MQ=255)

                                                 gCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaa                        <  2:1474915/76‑1 (MQ=255)

                                                 gCATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaa                        <  2:2538344/76‑1 (MQ=255)

                                                 gCAGACGCGGAGTAGGGGGGGCGGG‑GGCCTGTATCGCTGCTGGATGGGTTACCAGATGCGACGTGGTGCACTGaaa                        <  2:2559417/76‑1 (MQ=255)

                                                  cATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGgaaa                       >  1:1456242/1‑76 (MQ=255)

                                                  cATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaaa                       >  2:3722771/1‑76 (MQ=255)

                                                  cATACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaaa                       >  1:2799802/1‑76 (MQ=255)

                                                    tACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaaaaa                     <  2:536603/76‑1 (MQ=255)

                                                    tACGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaaaaa                     <  2:2197577/76‑1 (MQ=255)

                                                    tACGCTGATTATGGTGGGCGGT‑GGACTGTATCTCTGCTGGATGGGGTACCAGATGCTACGCGCTGCACTGaaaaaa                     >  1:1543061/1‑76 (MQ=255)

                                                     aCGCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAag                    >  2:2045236/1‑76 (MQ=255)

                                                       gCTGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAagag                  >  1:3201180/1‑76 (MQ=255)

                                                         tGATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGGGCACTGAAAAAAGAggg                >  2:4603056/1‑75 (MQ=255)

                                                          gATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCg               <  2:2314185/76‑1 (MQ=255)

                                                          gATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCg               <  1:773925/76‑1 (MQ=255)

                                                          gATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCg               <  1:2999775/76‑1 (MQ=255)

                                                          gATTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCg               <  1:3237668/76‑1 (MQ=255)

                                                          gATTATGGGGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCg               >  2:1736867/1‑76 (MQ=255)

                                                           aTTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCgg              >  2:2698806/1‑76 (MQ=255)

                                                           aTTATGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCgg              <  1:582446/76‑1 (MQ=255)

                                                           aTTATGGTGGGCGGC‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCgg              >  1:3719291/1‑76 (MQ=255)

                                                              aTGGTGGGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGttt           <  1:168060/76‑1 (MQ=255)

                                                                ggtggGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCATATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCt         <  1:2584118/76‑1 (MQ=255)

                                                                ggtggGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCt         <  1:2045237/76‑1 (MQ=255)

                                                                ggtggGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCt         <  1:4298706/76‑1 (MQ=255)

                                                                ggtggGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCt         <  1:3357514/76‑1 (MQ=255)

                                                                 gtggGCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTg        <  2:4203779/76‑1 (MQ=255)

                                                                  tggTCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGc       <  1:152652/76‑1 (MQ=255)

                                                                  ggggCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACGAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGc       <  2:761217/75‑1 (MQ=255)

                                                                   gggCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGGGTCTGcc      >  2:2862089/1‑75 (MQ=255)

                                                                     gCGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAcc    <  2:1737982/76‑1 (MQ=255)

                                                                      cGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCt   <  2:2674792/76‑1 (MQ=255)

                                                                      cGGT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGGGTCTGccccc   >  2:455649/1‑75 (MQ=255)

                                                                       ggT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTTTGCCCCtc  >  2:1444662/1‑75 (MQ=255)

                                                                       ggT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTg  <  1:4719811/76‑1 (MQ=255)

                                                                       ggT‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGGTTTTTCACCTg  >  1:3307076/1‑76 (MQ=255)

GGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGT‑GG‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTG  >  NC_000913/4005525‑4005670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`