Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 365,405 Δ93 bp coding (33‑125/3075 nt) lacZ ← beta‑D‑galactosidase

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 365405 365497 93 248 [0] [0] 244 lacZ beta‑D‑galactosidase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3654040 (0.000)243 (1.780) 106/150 0.0 100% coding (126/3075 nt) lacZ beta‑D‑galactosidase
?NC_000913 365498 = 0 (0.000)coding (32/3075 nt) lacZ beta‑D‑galactosidase

Only 100 of 243 total aligned reads displayed.

GGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/365330‑365404
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACA  >  NC_000913/365498‑365572
                                                                                                                                                      
 GTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCAC                                                                           <  2:2968946/76‑1
 GTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCAC                                                                           <  2:3171323/76‑1
 GTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCAC                                                                           <  1:737432/76‑1
  TGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCCGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACG                                                                          >  2:2462464/1‑76
  TGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACG                                                                          >  2:2421156/1‑76
    gCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGAC                                                                        <  2:131538/75‑1
    CCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGAC                                                                        <  1:2858554/76‑1
       GAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGC                                                                     <  2:3513775/76‑1
       GAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGC                                                                     <  2:2071053/76‑1
         AACCAGGCAAAGGGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCA                                                                   <  2:1360209/76‑1
          acgAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAG                                                                  <  2:1716368/73‑1
          ACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAG                                                                  <  1:2353127/76‑1
          ACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAG                                                                  <  1:4473019/76‑1
           caAGGCAAAGCGCCATTCGCCATTCGGGCTGCGCAACGGTTGGGAAGGGCGATCGGTGCGGGCCACGCCGGCCAGT                                                                 <  2:2295910/74‑1
           CCAGGCAAAGCGCCATTCGCCATTCAGGCTGCACAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGT                                                                 <  2:2890024/76‑1
            CAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTG                                                                <  1:2942044/76‑1
            CAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTG                                                                <  1:4518359/76‑1
             AGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGA                                                               >  1:308586/1‑76
             AGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGA                                                               <  2:2770004/76‑1
              GGCAAAGCGCCATTCGCCATTCAGGCTGCGCACCTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAA                                                              <  1:3572264/76‑1
              GGCAAAGCGCCATTCGCCAGTCGGGCGGGGCAACTGTGGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAA                                                              <  2:4726600/76‑1
               GCAAAGCGCCATGCGCCATTCAGGCTGCGCAACTGTGGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAAT                                                             <  1:3847484/76‑1
                CAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATC                                                            <  1:444905/76‑1
                CAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATC                                                            >  1:1164584/1‑76
                CAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTGGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATC                                                            <  1:2579923/76‑1
                CAAAGCGCCATGCGCCTTTCAGGCGGCGCAACTGTGGGGAAGGGCGATCGGTGGGGGCCACGACGGCCAGTGAATC                                                            <  2:3771167/76‑1
                 AAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCC                                                           <  1:4776778/76‑1
                  AAGCGCCATTCGCCATTCAGGCTGCGCAACTGTGGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCG                                                          <  2:4353331/76‑1
                   AGCGCCATTCGCCTTTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGT                                                         <  2:2024504/76‑1
                       CCATTCGCCATTCAGGCTGCGCAGCGGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATC                                                     <  2:2845338/76‑1
                          TTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGCATCCGTAATCATG                                                  >  1:1393482/1‑76
                           TCGCCATTCAGGCTGCGCAACTGTGGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGG                                                 <  1:4323382/76‑1
                            CGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCAGTAATCATGGT                                                >  2:3305768/1‑76
                               CATTCAGGCGGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCAT                                             <  2:3829748/76‑1
                                atgCAGGCTGCGCAACTGTGGGGAAGGGCGAGCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATA                                            <  2:559349/73‑1
                                ATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATA                                            >  1:1752467/1‑76
                                  TCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGC                                          <  1:856/76‑1
                                  TCAGGCTGCGCAACTGTGGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGC                                          <  1:3938607/76‑1
                                  TCAGGCGGCGCAACTGTGGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGC                                          <  1:2229847/76‑1
                                   cgGGCTGCGCAACTGTGGGAAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCT                                         <  1:2784733/74‑1
                                   CAGGCTGCGCAACTGTGGGGAAGGTCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCT                                         <  1:1436406/76‑1
                                    AGGCTGCGCAACTGTGGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTG                                        <  1:675475/76‑1
                                      GCTGCGCACCTGTTGGGAGGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTT                                      <  1:1905732/76‑1
                                      GCTGCGCAACTGTGGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTT                                      <  1:2624658/76‑1
                                       CTGCGGATCTGTGGGGAAGGGCGCGCGGTGCGGGCCAGGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTT                                     <  2:440700/76‑1
                                        TGCGCAGGTGTGGGGAGGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTC                                    <  2:1850115/76‑1
                                         GCGCAGCTGTTGGGAAGGGCGATCGGTGCGGGCCGCGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCC                                   <  2:4179449/76‑1
                                         GCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCC                                   <  1:4187579/76‑1
                                         GCGCAACTGTGGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCC                                   <  1:3650197/76‑1
                                          CGCAACTGTGGGGAGGGGGGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCT                                  <  2:3236571/76‑1
                                          CGCAACTGTGGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCT                                  <  2:2324706/76‑1
                                            CAACTGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGT                                >  2:3731390/1‑76
                                            CAACTGTGGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGT                                <  1:4699690/76‑1
                                             AACTGTTGGGAAGGGCGATCGGTGCGGGCCGCGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTG                               >  2:363374/1‑76
                                             AACTGTGGGGAGGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTG                               <  2:1805822/76‑1
                                             AACTGTGGGGAAGGGCGATGGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTG                               <  2:1607691/76‑1
                                             AACTGTGGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTG                               <  1:1353567/76‑1
                                                TGTTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGA                            >  2:2852777/1‑76
                                                 gtgGGGAGGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAA                           <  2:789121/73‑1
                                                 gtgGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAA                           <  1:4109377/73‑1
                                                 gggGGGAGGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAA                           <  2:1757824/73‑1
                                                  tgGGGAGGGGCGATCGGTGCGGGCCACGCCGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAA                          <  1:2839970/74‑1
                                                  ggGGGAAGGGCGACGGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAA                          <  2:1546621/74‑1
                                                  gTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAA                          <  2:1998069/75‑1
                                                  TTGGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAt                          >  1:1527485/1‑75
                                                   TGGGAAGGGCGATCGGCGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTAATAGCTGGTTCCTGTGTGAAAT                         >  1:4361500/1‑76
                                                    GGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATT                        >  1:3557595/1‑76
                                                    GGGAAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATT                        >  2:2736350/1‑76
                                                      gagGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGT                      <  1:2044417/73‑1
                                                       ggGGGCGGTCGGGGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTT                     <  2:3672365/74‑1
                                                       AAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTT                     <  1:3746635/76‑1
                                                       AAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTT                     >  2:1390381/1‑76
                                                       AAGGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTT                     <  1:882428/76‑1
                                                         GGGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTAT                   <  1:2462464/76‑1
                                                          GGCGATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATC                  >  2:1031412/1‑76
                                                             GATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTTTTTCCTGTGTGAATTTTTTCTCCcc               >  2:292742/1‑74
                                                             GATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGC               >  1:1074101/1‑76
                                                             GATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGC               >  2:2165520/1‑76
                                                             GATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGC               >  1:4631012/1‑76
                                                             GATCGGGGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGGTATCCGC               >  2:2524222/1‑76
                                                              gTCGTTGCGGGCCGCGCCGGCCCGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCT              <  2:2629531/75‑1
                                                              ATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCT              <  1:4214705/76‑1
                                                              ATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCT              >  1:3999030/1‑76
                                                              ATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCT              >  2:3448900/1‑76
                                                              ATCGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCT              <  1:653802/76‑1
                                                              ATCGGTGCGGGCCACGACGGCAAGTGAATCCGTAAGCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCT              <  1:3811355/76‑1
                                                               TCGGTGCGGGCCACGGCGGCCAGTGAATCCGTCATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTC             <  1:1652692/76‑1
                                                                CGGTGGGGGCCGCGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCA            <  2:1573434/76‑1
                                                                CGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCA            <  2:3287509/76‑1
                                                                CGGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCA            <  1:3519640/76‑1
                                                                CGGGGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCA            <  1:180396/76‑1
                                                                 GGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCAC           >  2:307270/1‑76
                                                                 GGTGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCAC           <  1:1171741/76‑1
                                                                   TGCGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAA         <  1:2981801/76‑1
                                                                     CGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATT       <  1:3176912/76‑1
                                                                     CGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATT       >  1:3629116/1‑76
                                                                     CGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCC                 <  1:4577420/66‑1
                                                                     CGGGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCC                 >  2:4577420/1‑66
                                                                       GGCCACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCC     >  2:3962544/1‑76
                                                                          CACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACA  >  1:3039967/1‑76
                                                                                                                                                      
GGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/365330‑365404
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACA  >  NC_000913/365498‑365572

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.