| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 244134 = | 138 (1.010) | 20 (0.150) +T |
7/148 | 9.7 | 12.6% | intergenic (+13/‑193) | gmhA/yafJ | phosphoheptose isomerase/putative amidotransferase |
| ? | NC_000913 | = 376715 | 143 (1.050) | intergenic (+180/+44) | yaiL/yaiM | nucleoprotein/polynucleotide‑associated enzyme/putative esterase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 415 total aligned reads displayed.
AGATTCACATTAAAGTGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCC > NC_000913/244060‑244209 | cacaTTAAAGTGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATa > 1:4022418/1‑76 (MQ=255) tAAAGTGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACg > 1:113280/1‑76 (MQ=255) aaaGTGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGt < 1:3854975/76‑1 (MQ=255) aaaGTGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGt > 1:4642987/1‑76 (MQ=255) aaaGTGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGt > 1:1657395/1‑76 (MQ=255) aaGTGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGtt > 1:3804195/1‑76 (MQ=255) tGATCCATATCCTGATCCAGTTGCTTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTATGCCGGATACGACGtttcc < 1:362738/76‑3 (MQ=255) tGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTAc < 1:787693/76‑1 (MQ=255) tGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTAc < 1:3702573/76‑1 (MQ=255) gATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTAcg > 2:356715/1‑76 (MQ=255) aTCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTAcgc < 1:2041259/76‑1 (MQ=255) tCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTAcgcc < 2:1321072/76‑1 (MQ=255) tCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTAcgcc < 1:734274/76‑1 (MQ=255) cATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTAcgccgc > 2:4421734/1‑76 (MQ=255) atatCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCa > 2:245284/1‑76 (MQ=255) ctatgcgcgtcttatcaggcctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCAt > 1:1899794‑M1/41‑76 (MQ=255) ctatgcgcgtcttatcaggcctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCAt > 2:4013551‑M1/41‑76 (MQ=255) atgcgcgtcttatcaggcctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCAttt < 1:3561435‑M1/38‑1 (MQ=255) atgcgcgtcttatcaggcctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCAttt > 1:2632424‑M1/39‑76 (MQ=255) gcgcgtcttatcaggcctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTtgt < 1:4185732‑M1/40‑1 (MQ=255) gcgcgtcttatcaggcctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTtgt > 1:3106296‑M1/37‑76 (MQ=255) aGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTtgt < 1:1620068/76‑1 (MQ=255) cgtcttatcaggcctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTgcg > 2:1921600‑M1/34‑76 (MQ=255) gtcttatcgggcctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCTCATGCGGCATTTGTgcgc > 2:3304122‑M1/33‑76 (MQ=255) gtcttatcaggcctacggtttatgggcgaagtGTAGACCGGATAAGCCGTTTACGCCGCATCCGGCATTTGTgcgc < 2:1553488‑M1/44‑1 (MQ=255) attgaAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGct < 2:2767561/76‑1 (MQ=255) attgaAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGct > 2:1658897/1‑76 (MQ=255) ttatcaggcctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctga < 1:4264329‑M1/47‑1 (MQ=255) ttaacagccctagggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGACGCATCCGGCATTTGTGCGctga < 1:3331543‑M1/47‑1 (MQ=255) tatcaggcctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgat < 1:2933921‑M1/48‑1 (MQ=255) tatcaggcctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgat < 1:4310030‑M1/48‑1 (MQ=255) tatcaggcctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgat > 1:1983914‑M1/29‑76 (MQ=255) tatcaggcctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgat > 2:707997‑M1/29‑76 (MQ=255) tatcaggcctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgat > 1:3996672‑M1/29‑76 (MQ=255) gaAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgat > 1:585015/1‑76 (MQ=255) gaAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgat < 1:4847331/76‑1 (MQ=255) atcaggcctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgatg > 1:4716107‑M1/28‑76 (MQ=255) aaaaGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgatgc > 2:3902064/1‑76 (MQ=255) aaaaGAGATGGTGAAGTAGGTCTGGGGTAGGCCGGATAGGACGTTTACGCCGGATTCGGCATTTGTGCGctgatgc < 2:366655/76‑1 (MQ=25) caggcctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgatgcc > 2:2232067‑M1/26‑76 (MQ=255) aaGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgatgcct < 1:3074908/76‑1 (MQ=255) ggcctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgatgcctg < 1:1102352‑M1/53‑1 (MQ=255) agagATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgatgcctg > 2:3219097/1‑76 (MQ=255) cctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgatgcctgat > 1:838572‑M1/22‑76 (MQ=255) cctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgacgcctgat < 2:2047122‑M1/55‑1 (MQ=255) agaTGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgatgcctgat > 2:2193817/1‑76 (MQ=255) agaTGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgatgcctgat < 2:4055321/76‑1 (MQ=255) ctacggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgatgcctgatg > 2:2808035‑M1/21‑76 (MQ=255) aTGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGctgatgcctgatgc > 1:4153795/1‑76 (MQ=255) ggTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGa > 1:2421049/1‑76 (MQ=255) cggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGa > 2:3058002‑M1/18‑76 (MQ=255) ggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATgcgcc < 2:791796‑M1/60‑3 (MQ=255) ggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGAc > 1:1220008‑M1/17‑76 (MQ=255) ggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGAc > 1:2871336‑M1/17‑76 (MQ=255) ggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGAc < 1:2144868‑M1/60‑1 (MQ=255) ggtttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGAc > 2:1232198‑M1/17‑76 (MQ=255) ttAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACg > 1:4492103/1‑76 (MQ=255) tttaggggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGc > 2:513746‑M1/15‑76 (MQ=255) taagtaagTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGc > 2:2622933/1‑76 (MQ=255) taagtaagTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGc > 1:4063444/1‑76 (MQ=255) ttatgggggaagtGTGGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCt > 2:1093907‑M1/14‑76 (MQ=255) ttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCt < 2:1826415‑M1/63‑1 (MQ=255) ttatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCt > 1:3174089‑M1/14‑76 (MQ=255) tatgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTg > 2:3792020‑M1/13‑76 (MQ=255) gtaagtCTGGCGTAGGCCGGATAAGACGTTTACGTCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGa > 1:2471927/1‑76 (MQ=255) gtaagtCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGa > 1:2190836/1‑76 (MQ=255) atgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGa > 2:3426577‑M1/12‑76 (MQ=255) tgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCGTCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGAc > 2:3120024‑M1/11‑76 (MQ=255) tgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGAc < 1:1862510‑M1/66‑1 (MQ=255) tgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGAc < 2:4538818‑M1/66‑1 (MQ=255) tgggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCCGCTGCGACGCTGAc < 2:1885049‑M1/66‑1 (MQ=255) gggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGAcg < 2:2520524‑M1/67‑1 (MQ=255) gggcgaagtGTAGACCGGATAAGACGTTTACGCCGCACCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGAcg < 1:2712127‑M1/67‑1 (MQ=255) ggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGAcgc < 1:3256286‑M1/68‑1 (MQ=255) ggcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGAcgc < 2:2272443‑M1/68‑1 (MQ=255) agtCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGAcgc < 1:230013/76‑1 (MQ=255) gtCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGAcgcg < 1:1019760/76‑1 (MQ=255) gcgaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGAcgcg > 1:92968‑M1/8‑76 (MQ=255) gaagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTc < 2:4141165‑M1/71‑1 (MQ=255) aagtGTAGACCGGATAAGACGTTTACGCCGCATTCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCt < 1:4748978‑M1/72‑1 (MQ=255) aagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCt < 1:461853‑M1/72‑1 (MQ=255) aagtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCt > 1:892318‑M1/5‑76 (MQ=255) ggCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCtt < 2:2945527/76‑1 (MQ=255) agtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCtt > 1:544551‑M1/4‑76 (MQ=255) agtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCtt > 1:4403094‑M1/4‑76 (MQ=255) gtGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTa < 1:3445982‑M1/74‑1 (MQ=255) tGTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTAt > 2:574274‑M1/2‑76 (MQ=255) ggTAGACCGGATAAGACGTTTGCGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTAt < 2:4589051/75‑1 (MQ=255) cGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTAt > 1:3389673/1‑76 (MQ=255) gTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATc < 1:4550217/76‑1 (MQ=255) gTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATc < 2:1997530/76‑1 (MQ=255) gTAGACCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATc < 2:4271444/76‑1 (MQ=255) tAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCa > 2:1165748/1‑76 (MQ=255) agaccGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCAt > 1:1279745/4‑76 (MQ=255) agaccGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCAt > 1:1474298/4‑76 (MQ=255) ggCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATg < 1:1782176/76‑1 (MQ=255) accGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGc > 1:1749837/2‑76 (MQ=255) accGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGc > 1:3505024/2‑76 (MQ=255) ccGGATAAGACGTTTCCGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGcc < 1:1345558/76‑1 (MQ=255) ccGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGCTGCGACGCTGACGCGGCTTATCATGcc < 2:1470287/76‑1 (MQ=18) | AGATTCACATTAAAGTGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCC > NC_000913/244060‑244209 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |