| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3192559 = | 105 (0.770) | 57 (0.560) +ATGTGTTAATGAAACCTTC |
40/112 | 1.3 | 41.2% | intergenic (+18/+402) | b3051/b3052 | putative membrane protein/putative kinase |
| ? | NC_000913 | = 3192916 | 114 (0.840) | intergenic (+375/+45) | b3051/b3052 | putative membrane protein/putative kinase | |||||
Only 100 of 189 total aligned reads displayed.
ACAGCCAATCAGAGGGGGGAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGTTAGCCTTTTTTATCCTGTTGGATCTTCTTG > NC_000913/3192841‑3192991 | aCAGCCAATCAGAGGGGGGAGAAATCCTCCCTCACCCTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCaa < 1:2399407/76‑1 (MQ=255) aGCCAATCAGAGGGGGGAGAAATCCTCCCTCACCCTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAga > 2:4481750‑M2/1‑74 (MQ=255) gCCAATCAGAGGGGGGAGAAATCCTCCCTCACCCTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAGgaa > 2:473646‑M2/1‑73 (MQ=255) gCCAATCAGAGGGGGGAGAAATCCTCCCTCACCCTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaa > 1:3617018‑M2/1‑73 (MQ=255) tcaTCAGAGGGGGGAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGc > 1:806852/3‑76 (MQ=255) caTCAGAGGGGGGAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGcc < 1:3839671/75‑1 (MQ=255) aTCAGAGGGGGGAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCt < 2:2599951/76‑1 (MQ=255) aTCAGAGGGGGGAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCt > 1:116903/1‑76 (MQ=255) aTCAGAGGGGGGAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCt < 1:652725/76‑1 (MQ=255) tCAGAGGGGGGAGAAATCCTCCCTCACCCTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggttt > 2:4345657‑M2/1‑68 (MQ=255) cAGAGGGGGGAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGc < 2:2006488/76‑1 (MQ=255) cAGAGGGGGGAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGc > 1:2852009/1‑76 (MQ=255) cAGAGGGGGGAGAAATCCTCCCTCACCCTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttc < 2:1369570‑M2/76‑10 (MQ=255) aggggggggAGATATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAGCAACAGCGTCAATAGGCCTGcc < 2:2220795/73‑1 (MQ=255) agagGGGGGAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGcc < 1:757081/76‑1 (MQ=255) gagGGGGGAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCa > 1:1283057/1‑76 (MQ=255) gagGGGGGAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCa > 1:3064750/1‑76 (MQ=255) agGGGGGAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCAt > 2:1186370/1‑76 (MQ=255) ggggggAGAAATCCTCCCTCACCCTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttcatta > 1:984921‑M2/1‑63 (MQ=255) gggggAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGt < 1:4052901/76‑1 (MQ=255) gggggAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGt < 2:2659434/76‑1 (MQ=255) ggggAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTa < 1:4163261/76‑1 (MQ=255) ggggAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTa < 1:1966650/76‑1 (MQ=255) ggAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACg > 1:1703488/1‑76 (MQ=255) ggAGAAATCCTCCCTCACCCTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacac > 2:3600196‑M2/1‑59 (MQ=255) agaAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGaa < 2:4663054/76‑1 (MQ=255) gaAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAg < 2:1561608/76‑1 (MQ=255) aaaatCCTCCCTCACCCTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacata > 1:2596127‑M2/2‑56 (MQ=255) aaaTCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAACAAACAACAGCGTCAATAGGCCTGACATGTACGCAGc > 1:4724063/1‑76 (MQ=255) aaaTCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGc < 1:592395/76‑1 (MQ=255) aaaTCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGc > 1:4688388/1‑76 (MQ=255) tcctccCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCgag > 1:2886335/1‑76 (MQ=255) cctccctcACCCTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccct > 2:3010162‑M2/1‑51 (MQ=255) tccCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATc < 1:4334598/76‑1 (MQ=255) tccCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATc < 2:2292070/76‑1 (MQ=255) tccCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATc > 2:4103060/1‑76 (MQ=255) tccCTCACCCTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctgc < 2:606131‑M2/76‑28 (MQ=255) cccTCACCCTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggc > 2:1279351‑M2/1‑48 (MQ=255) ccTCACCCTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggcc < 1:2553884‑M2/76‑30 (MQ=255) ccTCACCCTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggca > 2:3438683‑M2/1‑47 (MQ=255) ctcacccTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggccc > 1:1652104‑M2/4‑46 (MQ=255) ttACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCtgtg > 2:323593/1‑76 (MQ=255) tcaccCTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggccca > 2:2743285‑M2/3‑45 (MQ=255) tACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCtgtgt < 2:1899254/76‑2 (MQ=255) cacCCTTGTTTCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggcccaa > 2:71214‑M2/2‑44 (MQ=255) aCCCTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggcccaaa > 1:2155270‑M2/1‑43 (MQ=255) cccTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAAc > 2:2214533/1‑76 (MQ=255) ccTTGTTCTTTTATTCTAGATTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAAcc < 1:3201685/76‑1 (MQ=255) ccTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggcccaaaaa < 1:2747291‑M2/76‑36 (MQ=255) ccTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAAcc < 1:3252486/76‑1 (MQ=255) cTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggcccaaaaag > 1:1880524‑M2/1‑40 (MQ=255) cTTGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaagggttcattaacacatatccctggcccaaaaag < 1:525329‑M2/76‑37 (MQ=255) cTTGTTCCTTTACTCTAGGTTGAAAAAACACCAGCGTCCATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCg > 2:506968/1‑76 (MQ=255) cTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCg < 2:1782828/76‑1 (MQ=255) ttGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaagggttcattaacacatatccctggcccaaaaagc > 2:864174‑M2/1‑39 (MQ=255) ttGTCCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGc < 1:1024930/76‑1 (MQ=255) tGTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggcccaaaaagcc > 2:3985633‑M2/1‑38 (MQ=255) gTTCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggcccaaaaagccg < 2:4858743‑M2/76‑40 (MQ=255) ttCCTTTACTTTAGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggcccaaaaagccgg > 2:1123254‑M2/1‑36 (MQ=255) ttCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCttt > 2:3798060/1‑76 (MQ=255) tCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTc > 2:3501625/1‑76 (MQ=255) tCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTc > 1:4704445/1‑76 (MQ=255) ccTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTcc > 1:871732/1‑76 (MQ=255) ccTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTcc < 1:104080/76‑1 (MQ=255) ctttactttaGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggcccaaaaagccgggga < 1:1836724‑M2/76‑44 (MQ=255) cTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCg < 2:3690674/76‑1 (MQ=255) cTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCg < 1:2799274/76‑1 (MQ=255) tACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGtt < 2:806852/76‑1 (MQ=255) tACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGtt > 1:661767/1‑76 (MQ=255) tACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGtt < 2:14541/76‑1 (MQ=255) aCTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGTTa < 2:2898330/76‑1 (MQ=255) ctttaggTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggcccaaaaagccggggattttt < 1:2645220‑M2/73‑49 (MQ=255) ctttaggTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggcccaaaaagccggggattttt < 2:4325015‑M2/73‑49 (MQ=255) ctctAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGTTAg < 2:3606600/76‑1 (MQ=255) tttagGTTTAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggcccaaaaagccggggatttttt > 1:2185161‑M2/3‑27 (MQ=255) tctAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGTTAGc > 1:3473421/1‑76 (MQ=255) ctAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGTTAGcc < 1:2371662/76‑1 (MQ=255) tAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGTTAGCCt < 1:1382189/76‑1 (MQ=255) aGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACg < 1:721832/41‑1 (MQ=255) aGGTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggcccaaaaagccggggattttttata < 2:2175326‑M2/76‑53 (MQ=255) aGGTGTAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggcccaaaaagccggggattttttata > 1:1914610‑M2/1‑24 (MQ=255) ggTTGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggcccaaaaagccggggattttttatat < 1:3009059‑M2/76‑54 (MQ=255) tGAAAAAAAATCAGCGTCAAgaaggtttcattaacacatatccctggcccaaaaagccggggattttttatatctg < 1:903932‑M2/76‑57 (MQ=255) gAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGTTAGCCTTTTTTa < 1:4852253/76‑1 (MQ=255) aaaCAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGTTAGCCTTTTTTATCCt > 1:4593848/1‑76 (MQ=255) aacaacAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGTTAGCCTTTTTTATCCTg > 1:3895661/1‑76 (MQ=255) acaacaGCGTCAATAGGCATGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGTTAGCCTTTTTTATCCTGt < 2:3101617/76‑1 (MQ=255) caacaGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGTTAGCCTTTTTTATCCTGtt < 1:396872/76‑1 (MQ=255) atcagcGTCAAgaaggtttcattaacacatatccctggcccaaaaagccggggattttttatatctgcgttccgct > 2:4442384‑M2/3‑11 (MQ=255) aacaGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGTTAGCCTTTTTTATCCTGTTg < 1:965387/76‑1 (MQ=255) caGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGTTAGCCTTTTTTATCCTGTTGGa > 1:3290887/1‑76 (MQ=255) aGCGTCAAgaaggtttcattaacacatatccctggcccaaaaagccggggattttttatatctgcgttccgctaaa > 2:2645220‑M2/1‑8 (MQ=255) aGCGTCAAgaaggtttcattaacacatatccctggcccaaaaagccggggattttttatatctgcgttccgctaaa < 1:4347726‑M2/76‑69 (MQ=255) gTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGTTAGCCTTTTTTATCCTGTTGGAtctt < 1:931260/76‑1 (MQ=255) tCAAgaaggtttcattaacacatatccctggcccaaaaagccggggattttttatatctgcgttccgctaaaaggt > 1:2668066‑M2/1‑4 (MQ=255) cAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGTTAGCCTTTTTTATCCTGTTGGAtcttct < 1:702102/76‑1 (MQ=255) aagaaggtttcattaacacatatccctggcccaaaaagccggggattttttatatctgcgttccgctaaaaggtgc > 2:4206577‑M2/1‑2 (MQ=255) aagaaggtttcattaacacatatccctggcccaaaaagccggggattttttatatctgcgttccgctaaaaggtgc < 1:1752694‑M2/76‑75 (MQ=255) aaTAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGCTAGCCTTTTTTATCCTGTTGGATcttctt > 2:1380730/1‑76 (MQ=255) agaaggtttcattaacacatatccctggcccaaaaagccggggattttttatatctgcgttccgctaaaaggtgca > 2:1752693‑M2/1‑1 (MQ=255) | ACAGCCAATCAGAGGGGGGAGAAATCCTCCCTTACCCTTGTTCCTTTACTCTAGGTTGAAAAAACAACAGCGTCAATAGGCCTGCCATGTACGAAGCGAGATCTGTGAACCGCTTTCCGGTTAGCCTTTTTTATCCTGTTGGATCTTCTTG > NC_000913/3192841‑3192991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |