Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3421343–3422232	3422232	1–890	44 [43]	[43] 47	[rrfD]–[rrlD]	[rrfD],[rrlD]

GGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTAC  >  NC_000913/3422213‑3422308                     |                                                                            ggTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCt                      >  1:3306092/1‑76 (MQ=31) ggTCAACGTTAGAACATCAAACATTAAAGG‑‑GGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa                    <  1:901134/76‑1 (MQ=11)   tCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa                    >  2:1473387/1‑76 (MQ=34)    cAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                   <  2:1034587/76‑1 (MQ=35)    cAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                   <  1:1829827/76‑1 (MQ=35)    cAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                   >  1:4664975/1‑76 (MQ=35)     aaCGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGc                  >  1:4589182/1‑76 (MQ=35)     aaCGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGc                  <  2:2406123/76‑1 (MQ=35)      aCGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGcc                 <  2:3245891/76‑1 (MQ=35)       cGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCt                <  1:847338/76‑1 (MQ=35)        gTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTc               >  2:1291805/1‑76 (MQ=35)        gTTAGAACATCAAACATTAAAGGGTGGAATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTc               >  2:1920551/1‑76 (MQ=25)         ttAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTcc              >  2:195391/1‑76 (MQ=34)         ttAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTcc              >  1:2441127/1‑76 (MQ=35)          tAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTccc             >  1:25990/1‑76 (MQ=35)           aGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTcccc            >  1:3954362/1‑75 (MQ=25)           aGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCa            >  1:3658525/1‑76 (MQ=35)            gAACGTCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc           <  2:3543222/76‑1 (MQ=255)            gAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc           <  1:1990490/76‑1 (MQ=35)            gAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc           <  2:3353257/76‑1 (MQ=35)            gAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc           <  2:3625287/76‑1 (MQ=35)            gAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc           >  2:1136863/1‑76 (MQ=35)            gAACAGCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc           <  2:4166934/76‑1 (MQ=25)             aaCATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAcc          >  1:1177233/1‑76 (MQ=35)             aaCATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAcc          >  2:1871622/1‑76 (MQ=35)             aaCATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAcc          >  2:2489103/1‑76 (MQ=35)             aaCATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAcc          <  1:2367565/76‑1 (MQ=35)             aaCATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACGTCTAACCCTCCCAcc          >  2:2049279/1‑76 (MQ=255)              aCATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCt         >  2:1560795/1‑76 (MQ=35)              aCATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCt         >  1:3160512/1‑76 (MQ=35)               cATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTa        >  1:3190869/1‑76 (MQ=35)               cATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTa        <  1:1384116/76‑1 (MQ=35)               cATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTa        <  1:1914717/76‑1 (MQ=35)               cATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTa        <  2:3405911/76‑1 (MQ=35)                agcAAACATTAAAGGATGGTATTTCAAGGCCGGCGCCATGCAGAATGGCGTCCACACTTCTAAGCCACACACCTac       >  2:3147409/3‑75 (MQ=11)                 tCAAACATTAAAGGATGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATc      <  1:1857610/76‑1 (MQ=255)                   aaaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCt    <  1:3759604/76‑1 (MQ=35)                   aaaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCt    >  2:2241766/1‑76 (MQ=35)                   aaaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCt    <  2:2844942/76‑1 (MQ=35)                    aaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTa   >  2:4507367/1‑76 (MQ=35)                    aaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTa   <  1:1485085/76‑1 (MQ=35)                    aaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTa   >  1:2984196/1‑76 (MQ=35)                    aaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTa   <  2:1876433/76‑1 (MQ=35)                     aCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTac  <  2:25990/76‑1 (MQ=35)                     aCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTac  <  1:1219203/76‑1 (MQ=35)                     aCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTac  <  2:3678225/76‑1 (MQ=35)                     aCATTAAAGGGTGGTATTTCAACGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCACACCTATCCTac  >  1:1139409/1‑76 (MQ=255)                     |                                                                            GGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTAC  >  NC_000913/3422213‑3422308

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑