Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,876,595 G→C P385A (CCG→GCG)  gyrB ← DNA gyrase subunit B

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,876,5950GC100.0% 264.5 / NA 106P385A (CCG→GCG) gyrBDNA gyrase subunit B
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (39/67);  total (39/67)

Only 100 of 107 total aligned reads displayed.

CTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGGCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAG  >  NC_000913/3876523‑3876664
                                                                        |                                                                       
cTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGcgccgc                                                                      <  2:4341631/76‑1 (MQ=255)
  gCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCtt                                                                    <  1:2205523/76‑1 (MQ=255)
  gCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCCCGCGCGCGACGCGCCGCtc                                                                    >  2:3667561/1‑75 (MQ=255)
   ccAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTc                                                                   <  1:3250694/76‑1 (MQ=255)
   ccAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTc                                                                   <  1:1795866/76‑1 (MQ=255)
   ccAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCCTc                                                                   >  1:2356207/1‑76 (MQ=255)
   ccAGTGTTCCCGTCAGGCCGGCTAAGTCGGGCGCCAGTTGACAGCTGGTCATTTCACGCACGCGACGCGCCGCTTc                                                                   <  2:4630650/76‑1 (MQ=255)
     aGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcac                                                                <  2:3586590/76‑1 (MQ=255)
      gTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacg                                                               <  2:3516139/76‑1 (MQ=255)
      gTTGGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacg                                                               <  1:185556/76‑1 (MQ=255)
       tttGCCCGTCAGGCCCGCTAAGTCGAGCGCACCTTGACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacgg                                                              <  1:1837122/76‑1 (MQ=255)
       tttGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacgg                                                              <  1:2550110/76‑1 (MQ=255)
        ttGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacggg                                                             <  2:2583129/76‑1 (MQ=255)
          gCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacgggca                                                           <  1:3428853/76‑1 (MQ=255)
            ccGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCACTTCCCCCGCGCGACGCCCCGCCTcaccggcagc                                                         >  2:525671/1‑74 (MQ=255)
             cGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCCCGCGCGCGGCGCGCCGCCTcacggggacgg                                                        >  1:3627833/1‑76 (MQ=255)
              ggCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacgggcacggg                                                       <  2:1460133/76‑1 (MQ=255)
              ggCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACCCGCGCGACGCGCCGCCTCaccgggcccgg                                                        >  2:2459386/1‑76 (MQ=255)
               gCAGGCCCGCTAAGTCGAGCGCACCTTTCCGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCacgggcacgggc                                                      <  1:1429770/76‑1 (MQ=255)
               gCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCacgggcacgggc                                                      <  1:985300/76‑1 (MQ=255)
               gCAGGCCCGCGAAGTCGAGCGCAACTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCacgggcacgggc                                                      <  2:1596947/76‑1 (MQ=255)
                cacgCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACCCGCGAGACGCGCCCCACCAcggcgacgggca                                                     >  2:4093820/4‑76 (MQ=255)
                 aGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCCCGCGCGCGACGCGCCCCCTCCccggcaccggcac                                                    >  2:1857511/1‑75 (MQ=255)
                 aGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGgcag                                                    <  2:3538059/76‑1 (MQ=255)
                  ggCCCGCTAAGTCGAGCGCACCTTTCCGGCGGGTCATTTCGCTCGCGCGACGCGCCGCTTCACGGGCACGGgcagc                                                   <  2:2350564/76‑1 (MQ=255)
                  ggCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGgcagc                                                   <  2:2586049/76‑1 (MQ=255)
                   gCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACTCGCGGCTTCACGGGCACGGgcagca                                                  <  1:2891086/76‑1 (MQ=255)
                    cgcGCTGAGTCGAGCGCAACTTTACGGCGGGTCATTTCACGCTCGCGACGCGCCGCTTCGCGGGCACGGGCGGCAt                                                 <  2:1620432/74‑1 (MQ=255)
                    cccGGTAAGGCGATCGCCCCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCAt                                                 <  2:3990389/76‑1 (MQ=255)
                     ccGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCCCGCGCGCGGCGCGCCGCTTCACGGGCACGGGGAGCATc                                                >  1:3629879/1‑76 (MQ=255)
                     ccGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCCCCGGCAGCGTc                                                >  2:2296767/1‑76 (MQ=255)
                     ccGCGAAGTCGAGCGCACCTTTCCGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATc                                                <  2:2323638/76‑1 (MQ=255)
                         tAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTACGGGCACGGGCAGCATCGATaa                                          >  1:1444284/1‑76 (MQ=255)
                         tAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCCTCACGGGCACGGGCAGCCTCGATa                                           >  1:3719415/1‑76 (MQ=255)
                         gaaGGCGAGCGCCCCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATa                                           <  2:3314415/75‑1 (MQ=255)
                           aGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAAt                                         <  2:3006499/76‑1 (MQ=255)
                           aGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAAt                                         <  1:3163014/76‑1 (MQ=255)
                           aGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAAt                                         >  1:2784098/1‑76 (MQ=255)
                               gAGCGCCCCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTg                                     <  2:2002983/76‑1 (MQ=255)
                               gAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTg                                     <  1:4763849/76‑1 (MQ=255)
                               gAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTg                                     <  2:4092170/76‑1 (MQ=255)
                                 gcgcACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGcc                                   <  1:4392602/76‑1 (MQ=255)
                                 gcgcACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACCGGCACGGGCAGCATCGATAAATTTTGc                                    >  1:6212/1‑76 (MQ=255)
                                   gctccTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCaa                                 <  2:455933/73‑1 (MQ=255)
                                   gcgccTTTACGGGGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCaa                                 <  2:664680/73‑1 (MQ=255)
                                   gcACCTTTACGGCGGGGCATTTCGCGCGCGCGGCGCGCCGCCTCACCGGCACGGGCAGCATCGATAATTTTTCCaa                                 >  1:1090172/1‑76 (MQ=255)
                                   gcACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCCTCCCGGGCACCGGCCGCAACGAGAAATTTGCCac                                 >  2:4307096/1‑75 (MQ=255)
                                   gcACCTTTACGGCGGGGCAGTTCACGCACGCGACACGCCGCATCCACGGCCCCGGAAGAATCCATAACTTTGccca                                 >  2:3387394/1‑74 (MQ=255)
                                    cACCTTTACGGCGGGTCATTTCACGCGCTCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGcccac                                <  1:2083489/76‑4 (MQ=255)
                                    cACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAAc                                <  1:861843/76‑1 (MQ=255)
                                     cccTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAAcc                               <  1:543363/75‑1 (MQ=255)
                                      ccTTTCCGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCa                              <  2:2345398/76‑1 (MQ=255)
                                      ccTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCCTCGATAATTTTGCCAACCa                              >  1:3979993/1‑76 (MQ=255)
                                      ccTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACCGGGAGCATCGATAATTTTGCCCAccc                              >  2:3869897/1‑75 (MQ=255)
                                      ccTTGACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCa                              <  2:4426415/76‑1 (MQ=255)
                                       cTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCCTCACGGGCACGGGCAGCCTCGATAAATTTGCCAACCAc                             >  1:4473517/1‑76 (MQ=255)
                                       cTTTACGGCGGGTCAATTCACGCGCGCGCCGCGCCGCCTCACGGGCACGGGCAGCCACGATAATTTTTCCAAacac                             >  2:3127708/1‑76 (MQ=255)
                                        tttACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACg                            <  1:1548367/76‑1 (MQ=255)
                                          tACGGCGGGTCATTTCACCCGCGCGGCGCGCCGCTTCCCGGGCCCGGGGCGCCTCGATTATTTTGCCCACCCCgct                          >  2:3602966/1‑74 (MQ=255)
                                           tcggcggGGCATTTCACGCGCGCGGCGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAtt                         <  2:3408768/75‑1 (MQ=255)
                                           aCGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCCTCGATAATTTTGCCAAACACGAtt                         >  1:4349378/1‑76 (MQ=255)
                                           aCGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAtt                         <  1:4698813/76‑1 (MQ=255)
                                           aCGGCGGGGCATTTCACGCGCGCGACGCGCCCCTTCACGGGCACGGGCAGCATAACTAATTTTGTCAACCACgtat                         >  1:167514/1‑73 (MQ=255)
                                            cggcggGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAttt                        <  1:4846474/76‑1 (MQ=255)
                                             ggcggGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAtttt                       <  1:399990/76‑1 (MQ=255)
                                              gggggTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTc                      <  2:4704347/74‑1 (MQ=255)
                                              gcggGTACTTGCACCCGCGCGAAGCGCCGCTGCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTc                      <  2:4723853/76‑1 (MQ=255)
                                               ggggTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcg                     <  1:37120/75‑1 (MQ=255)
                                                gggTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcgc                    <  1:3547414/76‑1 (MQ=255)
                                                gggTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcgc                    <  1:3202262/76‑1 (MQ=255)
                                                gggTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTcgc                    >  2:1719881/1‑76 (MQ=255)
                                                  ggcATTTCCCGCGCGCGCCGCGCCGAGTCAAGGGCACGGGCAGCATAGATAATTTGGCCAACCACGATTTTCGCGt                  <  2:1458152/74‑1 (MQ=255)
                                                  ggcATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGt                  <  2:1446235/74‑1 (MQ=255)
                                                  gTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGt                  >  2:4560002/1‑76 (MQ=255)
                                                  gTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGt                  >  1:1281184/1‑76 (MQ=255)
                                                   tCATTTCGCGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTc                 <  1:1653184/76‑1 (MQ=255)
                                                   tCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTc                 <  1:2369032/76‑1 (MQ=255)
                                                    taTTTCGAGCGCGCGGCGGGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCg                <  2:1390629/75‑1 (MQ=255)
                                                     aTTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCgg               <  2:3321701/76‑1 (MQ=255)
                                                     aTTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCgg               >  2:3513699/1‑76 (MQ=255)
                                                     aTTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCgg               >  1:4214168/1‑76 (MQ=255)
                                                      tttCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGt              <  1:3222752/76‑1 (MQ=255)
                                                        tCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTg            <  1:2798281/76‑1 (MQ=255)
                                                         cACGCTCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTgg           <  1:3193663/76‑1 (MQ=255)
                                                         cACGCGGGCGAGGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTgg           <  2:645101/76‑1 (MQ=255)
                                                         cACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTgg           <  2:3627833/76‑1 (MQ=255)
                                                          ccgcgcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTggg          <  1:1304665/75‑1 (MQ=255)
                                                           cgcgcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGt         <  2:2808781/76‑1 (MQ=255)
                                                            gcgcgcgACGCGCCGTTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGCTggggt        >  2:1520111/1‑74 (MQ=255)
                                                             cgcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGttt       <  2:3486467/76‑1 (MQ=255)
                                                              gcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGtttt      <  1:107075/76‑1 (MQ=255)
                                                              gcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGtttt      <  1:1380533/76‑1 (MQ=255)
                                                              gcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGGTGGGgttt      >  2:1374119/1‑76 (MQ=255)
                                                               cgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTc     <  1:2233814/76‑1 (MQ=255)
                                                                gcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAAttt                                       <  2:302080/41‑1 (MQ=255)
                                                                gcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAAttt                                       >  1:302080/1‑41 (MQ=255)
                                                                gcgACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTcc    <  1:4542080/76‑1 (MQ=255)
                                                                 ggACGCGCCGCTTCACGGGCGCGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCca   <  2:4621137/75‑1 (MQ=255)
                                                                 cgACGCGCCGCTTCACGCGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGGTTTCca   >  1:4471213/1‑76 (MQ=255)
                                                                  gACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGGTTTCcag  >  1:2320655/1‑76 (MQ=255)
                                                                        |                                                                       
CTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGGCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAG  >  NC_000913/3876523‑3876664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: