BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,739,051	A→G	M373V (ATG→GTG)	ydhC →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,739,051	0	A	G	100.0%	298.6 / NA	112	M373V (ATG→GTG)	ydhC	putative transport protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (42/70); total (42/70)

Only 100 of 113 total aligned reads displayed.

GGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAATGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAA  >  NC_000913/1738981‑1739122

ggTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGCGATGTTATCAACAGTAGTGCTg                                                                    >  2:4629521/1‑76 (MQ=255)

 gTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTgg                                                                   >  1:2709299/1‑76 (MQ=255)

  tAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGt                                                                  <  1:3173229/76‑1 (MQ=255)

  tAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGt                                                                  <  2:3612822/76‑1 (MQ=255)

   aGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTc                                                                 <  2:3164652/76‑1 (MQ=255)

   aGTTTCCTGGCTGATCAGTATCAGCACCCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTc                                                                 <  1:4586341/76‑1 (MQ=255)

    gTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTcg                                                                <  1:1545050/76‑1 (MQ=255)

     tttCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTcgc                                                               <  1:929799/76‑1 (MQ=255)

      ttCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTcgcg                                                              <  2:2601452/76‑1 (MQ=255)

      ttCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTcgcg                                                              <  2:3341615/76‑1 (MQ=255)

      ttCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTcgcg                                                              >  1:451098/1‑76 (MQ=255)

       tCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCTACAGTAGTGCTGGTCgcgc                                                             >  1:4611614/1‑76 (MQ=255)

       tCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCgcgc                                                             <  1:4037050/76‑1 (MQ=255)

       tCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCgcgc                                                             >  2:1963425/1‑76 (MQ=255)

        ccTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCgcgcg                                                            >  2:1185291/1‑75 (MQ=255)

        ccTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCt                                                            >  1:1401072/1‑76 (MQ=255)

        ccTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCt                                                            <  1:4695951/76‑1 (MQ=255)

         cTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTg                                                           <  1:379178/76‑1 (MQ=255)

           ggCTGATGAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTggg                                                         <  1:4370962/76‑1 (MQ=255)

           ggCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTggg                                                         >  1:4159448/1‑76 (MQ=255)

            gCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGt                                                        >  1:400907/1‑76 (MQ=255)

            gCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGt                                                        >  2:3798661/1‑76 (MQ=255)

             gtGATCAGTATCAGCACGCCTTTGCTCACCCCCACCATCGTGATGTTATCATCAGTAGTGCTGGTCGCTCTGGGtt                                                       <  2:2997739/75‑1 (MQ=255)

             cTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGtt                                                       >  2:2112971/1‑76 (MQ=255)

             cTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCCGGTCGCGCTGGGtt                                                       <  1:2294611/76‑1 (MQ=255)

              tGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTa                                                      <  1:2990444/76‑1 (MQ=255)

               gATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTAc                                                     <  1:1794484/76‑1 (MQ=255)

               gATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTAc                                                     <  1:2906056/76‑1 (MQ=255)

               gATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTAc                                                     <  2:1909565/76‑1 (MQ=255)

               gATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGCCGCGCTGGGttcc                                                     >  2:69133/1‑74 (MQ=255)

                aTCAGTATCAGCACGCCATTGCTCACCACGACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACa                                                    <  2:4161804/76‑1 (MQ=255)

                aTCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACa                                                    <  1:4008492/76‑1 (MQ=255)

                aTCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACa                                                    <  2:4865286/76‑1 (MQ=255)

                 gcAGTAGAAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACan                                                   <  2:615487/75‑2 (MQ=255)

                    gTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACatgat                                                <  1:645471/76‑1 (MQ=255)

                      aTCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGc                                              >  2:2660469/1‑76 (MQ=255)

                       tCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCa                                             <  2:4214575/76‑1 (MQ=255)

                         aGCCCGCCAGTGCTCCCCACCGCCAGCGTGGTGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAAc                                           <  2:4546840/76‑1 (MQ=255)

                         aGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAAc                                           <  1:2709973/76‑1 (MQ=255)

                         aGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAAc                                           <  2:1968370/76‑1 (MQ=255)

                          gCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACg                                          >  1:2757315/1‑76 (MQ=255)

                          gCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACg                                          >  1:2719171/1‑76 (MQ=255)

                           cACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCCACGt                                         >  1:1218701/1‑76 (MQ=255)

                           cACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGt                                         >  1:1204328/1‑76 (MQ=255)

                            aCGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGtt                                        >  1:942959/1‑76 (MQ=255)

                              gCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTtgt                                      >  2:1414100/1‑76 (MQ=255)

                               ccATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTtgtg                                     >  2:1757527/1‑76 (MQ=255)

                                cATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTga                                    >  1:1970879/1‑76 (MQ=255)

                                   tGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTgaaga                                 >  1:4457387/1‑76 (MQ=255)

                                   tGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTgaaga                                 <  2:2376480/76‑1 (MQ=255)

                                   tGCTCACCACCACCAGCGTGATGTTATCAACAGTAGCGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTgaaga                                 >  2:2388836/1‑76 (MQ=255)

                                     cTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGaagaag                               <  1:1787148/76‑1 (MQ=255)

                                      tCACCACCGCCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGt                              <  2:3571868/76‑1 (MQ=255)

                                       caccaccacCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGtt                             <  1:2281011/76‑1 (MQ=255)

                                        cccaccgccaGCGTGATGTTATCAACAGTAGGGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTg                            <  2:4838989/75‑1 (MQ=255)

                                        cccaccaccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTg                            <  1:1778036/75‑1 (MQ=255)

                                         ccaccaccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTgg                           >  2:1714632/1‑76 (MQ=255)

                                          caccaccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGc                          >  2:4619078/1‑76 (MQ=255)

                                          caccaccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGc                          >  2:1984784/1‑76 (MQ=255)

                                           accaccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCt                         >  1:1036447/1‑76 (MQ=255)

                                           accaccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCt                         <  1:351544/76‑1 (MQ=255)

                                           accaccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCt                         <  2:4077496/76‑1 (MQ=255)

                                             cgccaGCGTTGTGTTATCAACAGGAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGc                       <  2:3172887/74‑1 (MQ=255)

                                             caccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGc                       >  1:3777106/1‑76 (MQ=255)

                                             caccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGc                       <  2:1590479/76‑1 (MQ=255)

                                               ccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCa                     >  1:1112351/1‑76 (MQ=255)

                                               ccaGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCa                     <  2:1049090/76‑1 (MQ=255)

                                                caGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAg                    <  2:4254428/76‑1 (MQ=255)

                                                   cGTGATGTTATCATCAGTAGTGCTTGTCGCGCTGGGTTGCATGATGCAACGGTGTGAAGAAGTTGGGTGCCAgcat                 <  1:63236/76‑4 (MQ=255)

                                                   cGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAAt                 <  2:2207265/76‑1 (MQ=255)

                                                   cGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAAt                 <  2:1863322/76‑1 (MQ=255)

                                                    gTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATc                <  2:2337223/76‑1 (MQ=255)

                                                    gTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATc                >  1:1288611/1‑76 (MQ=255)

                                                    gTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATc                <  1:1941251/76‑1 (MQ=255)

                                                    gTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATc                >  2:1006492/1‑76 (MQ=255)

                                                    gTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATc                <  1:2972645/76‑1 (MQ=255)

                                                       aTGTTATTAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATg             <  2:4753411/76‑1 (MQ=255)

                                                       aTGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATg             >  1:2190972/1‑76 (MQ=255)

                                                       aTGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATg             <  2:4523033/76‑1 (MQ=255)

                                                       aTGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATg             >  1:3465984/1‑76 (MQ=255)

                                                        tGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATgg            >  2:3711809/1‑76 (MQ=255)

                                                         gTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAATTTGGCTGCCAGAATCATGGc           <  1:4443266/76‑1 (MQ=255)

                                                         gTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATgga           >  2:430392/1‑75 (MQ=255)

                                                         gTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGc           <  1:1054020/76‑1 (MQ=255)

                                                         gTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGc           >  1:2366997/1‑76 (MQ=255)

                                                         gTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGc           <  1:4198614/76‑1 (MQ=255)

                                                         gTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGc           <  1:4591855/76‑1 (MQ=255)

                                                           tATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCaa         >  2:1176694/1‑76 (MQ=255)

                                                            aTCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAAt        <  1:3855818/76‑1 (MQ=255)

                                                            aTCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAAt        <  1:560230/76‑1 (MQ=255)

                                                             tCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATg       <  1:284018/76‑1 (MQ=255)

                                                             tCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATg       <  1:625348/76‑1 (MQ=255)

                                                             tCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATg       <  2:2366996/76‑1 (MQ=255)

                                                              cAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGc      <  1:3591251/76‑1 (MQ=255)

                                                              cAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGc      <  2:1882569/76‑1 (MQ=255)

                                                               aaCAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGcc     <  1:109182/76‑1 (MQ=255)

                                                                 cAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGa   <  2:4171780/76‑1 (MQ=255)

                                                                 cAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGa   <  1:4267040/76‑1 (MQ=255)

                                                                 cAGTAGTGCTGGTCGCGCTAGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGa   <  2:3778341/76‑1 (MQ=255)

                                                                  agtagtGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGaa  <  1:3669736/76‑1 (MQ=255)

GGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAATGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAA  >  NC_000913/1738981‑1739122

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`