BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,429,483	T→C	E65E (GAA→GAG)	dedD ←	putative lipoprotein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,429,483	0	T	C	100.0%	285.3 / NA	108	E65E (GAA→GAG)	dedD	putative lipoprotein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (51/57); total (51/57)

Only 100 of 110 total aligned reads displayed.

TTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACTTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATC  >  NC_000913/2429411‑2429554

ttCAAGCTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCAcctct                                                                      <  2:3047535/76‑1 (MQ=255)

ttCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCAcctct                                                                      <  1:1056689/76‑1 (MQ=255)

   aaaCTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTcc                                                                   <  2:3259127/76‑1 (MQ=255)

   aaaCTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTcc                                                                   >  1:995472/1‑76 (MQ=255)

   aaaCTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTcc                                                                   <  2:1829362/76‑1 (MQ=255)

   aaaCTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCCGCCCGCACCTCTTcc                                                                   >  1:1790828/1‑76 (MQ=255)

      cTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGGGCTGCGGGATCACCTGCCCGCACCTCTTCCCCt                                                                >  2:4795505/1‑76 (MQ=255)

      cTCGGGGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCt                                                                <  2:4430408/76‑1 (MQ=255)

        cGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTgc                                                              <  1:2085747/76‑1 (MQ=255)

         ggTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCcgcg                                                             >  1:401383/1‑76 (MQ=255)

         ggTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTgcg                                                             >  1:3256064/1‑76 (MQ=255)

         ggTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTgcg                                                             <  2:1171984/76‑1 (MQ=255)

           tgtTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGcc                                                           >  1:3771737/1‑76 (MQ=255)

           tgtTATTGGCTGCAATAGTGCCCGGGTCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGcc                                                           <  1:2242854/76‑1 (MQ=255)

            gtTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCt                                                          >  1:1125958/1‑76 (MQ=255)

            gtTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCCGCCCCCACCTCTTCCCCCTCGCCt                                                          >  2:4451107/1‑76 (MQ=255)

             ttATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCtt                                                         <  1:1901612/76‑1 (MQ=255)

             ttATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCtt                                                         <  2:2910519/76‑1 (MQ=255)

              tATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTc                                                        <  2:2343119/76‑1 (MQ=255)

              tATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTc                                                        <  1:1755826/76‑1 (MQ=255)

               tttGCCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTcc                                                       <  1:250440/75‑1 (MQ=255)

               aTTGTCTGCAAGAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCGCCTCTTCCGCTGCGCCTTcc                                                       <  1:2717932/76‑1 (MQ=255)

               aTTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTcc                                                       <  2:3108268/76‑1 (MQ=255)

                ttGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCcg                                                      <  1:2806641/76‑1 (MQ=255)

                ttGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCcg                                                      <  1:4819437/76‑1 (MQ=255)

                 tGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCCTCCGCTGCGCCTTCcgg                                                     >  2:1846880/1‑76 (MQ=255)

                  ggCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCcggc                                                    <  2:3402638/76‑1 (MQ=255)

                  ggCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCccgc                                                    >  2:1172339/1‑76 (MQ=255)

                  ggCCGCAAAAGTGGCCGAGTGTAGCGGCGGTGCTGCGGCATCTCCTGCCCGCACCTCTTCCGCTGCGCCTTCcggc                                                    <  1:309393/76‑1 (MQ=255)

                   gCTGCATGAGTGGCCGGGTCGAGCGCCGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCACCTTCcggcg                                                   <  2:271891/76‑1 (MQ=255)

                    cTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCcggcgg                                                  >  1:1068550/1‑76 (MQ=255)

                      gCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCCCCTCTTCCGCTGCGCCTTCCGGCCGCt                                                >  1:4582449/1‑76 (MQ=255)

                      gCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCt                                                >  1:2720157/1‑76 (MQ=255)

                      gCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCt                                                >  1:2520618/1‑76 (MQ=255)

                       cAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTg                                               >  2:742251/1‑76 (MQ=255)

                        aaTAGGGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGc                                              <  2:1223835/76‑1 (MQ=255)

                         aTAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCg                                             <  1:2311188/76‑1 (MQ=255)

                          tAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGt                                            <  1:2204354/76‑1 (MQ=255)

                           aggggCCGGCGCGGGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTc                                           <  2:4816446/73‑1 (MQ=255)

                           aGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCCCCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTc                                           >  2:4845248/1‑76 (MQ=255)

                           aGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGACCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTc                                           >  2:1607893/1‑76 (MQ=255)

                            gTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCg                                          <  1:4564286/76‑1 (MQ=255)

                              ggCCGGTTCGAGCGGCGGTGCGGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGt                                        <  2:4254475/76‑1 (MQ=255)

                              ggCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGt                                        >  1:3851266/1‑76 (MQ=255)

                              ggCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGt                                        <  1:4448141/76‑1 (MQ=255)

                               gCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTa                                       <  1:1729729/76‑1 (MQ=255)

                                ccGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCgggac                                      >  2:747088/1‑73 (MQ=255)

                                ccGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGtga                                      >  2:2561867/1‑74 (MQ=255)

                                 cGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAAc                                     <  1:496480/76‑1 (MQ=255)

                                 cGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGGAAc                                     >  2:4344772/1‑76 (MQ=255)

                                  ggATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAAcc                                    >  1:3650324/1‑75 (MQ=255)

                                  ggATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACg                                    <  1:3292557/76‑1 (MQ=255)

                                  ggATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGGaaac                                    >  2:1253030/1‑74 (MQ=255)

                                  ggATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGGAACg                                    >  1:4155964/1‑76 (MQ=255)

                                   gATCGAGCGACGGTGCGTCGGCGTCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGc                                   <  1:4343182/76‑1 (MQ=255)

                                    aTCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGcc                                  <  2:3229483/76‑1 (MQ=255)

                                    aTCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGcc                                  >  1:3125034/1‑76 (MQ=255)

                                    aTCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGcc                                  >  1:1626066/1‑76 (MQ=255)

                                    aTCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGGAACGcc                                  >  1:4396857/1‑76 (MQ=255)

                                     tCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCt                                 <  1:3566209/76‑1 (MQ=255)

                                     tCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGGAACGccc                                 >  1:804698/1‑75 (MQ=255)

                                     gcGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCt                                 <  2:2854905/75‑1 (MQ=255)

                                      cGAGCGCCGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCCGCCTCCGGCACGcccg                                >  2:1457329/1‑74 (MQ=255)

                                      cGAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGGACCGCCTg                                >  2:427471/1‑76 (MQ=255)

                                       gAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTgg                               >  2:2725582/1‑76 (MQ=255)

                                       gAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTgg                               >  1:1224115/1‑76 (MQ=255)

                                       gAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGGGACGccctg                               >  2:417922/1‑73 (MQ=255)

                                       gAGCGACGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGGAACGCCCgg                               >  2:2759923/1‑76 (MQ=255)

                                        ggCGACGGTGCTGCGGCATCCCCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTggg                              <  2:1539044/75‑1 (MQ=255)

                                            aCGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTggc                          >  1:4500659/1‑76 (MQ=255)

                                             ctgTGCTCCGGCATCCCCTTCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTggcg                         <  1:4327100/74‑1 (MQ=255)

                                             cGGTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTggcg                         <  1:2801085/76‑1 (MQ=255)

                                              ggTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGGAACGCCTGgggggggg                        >  1:3839161/1‑76 (MQ=255)

                                               gTGCTGCGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGGggcggc                       >  2:3421249/1‑76 (MQ=255)

                                                cggtgcGGCATCGCCCGCGCGAACCTCTCCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCt                      <  2:4001934/73‑1 (MQ=255)

                                                 gctgcGGCCTCACCTGCCCGCACCTCTTCCGCTGGGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTg                     <  2:1029276/76‑1 (MQ=255)

                                                 gctgcGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTg                     >  1:3125824/1‑76 (MQ=255)

                                                 gctgcGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTg                     <  2:2838558/76‑1 (MQ=255)

                                                  cggcGGCATCCCCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTgg                    <  2:1769506/74‑1 (MQ=255)

                                                    gcGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGca                  <  2:2765171/76‑1 (MQ=255)

                                                    gcGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGca                  >  1:2570129/1‑76 (MQ=255)

                                                     cGGCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGcat                 <  1:2725582/76‑1 (MQ=255)

                                                      ggCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGCAAAGCCTGGGGGGCGGCCGGcctc                >  2:936323/1‑76 (MQ=255)

                                                       gCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGcatca               <  1:2251041/76‑1 (MQ=255)

                                                       gCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGcatca               <  1:2693564/76‑1 (MQ=255)

                                                       gCATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGcatca               <  1:2838209/76‑1 (MQ=255)

                                                        cATCGCCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTAGcatcat              <  1:2399042/76‑1 (MQ=255)

                                                        cATCACCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCCGGcctccc              >  2:1702159/1‑74 (MQ=255)

                                                            aCCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCctatta          >  1:366922/1‑74 (MQ=255)

                                                            aCCTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCa          >  1:4746107/1‑76 (MQ=255)

                                                             ccTGCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCCTCATATCAg         >  2:1748534/1‑76 (MQ=255)

                                                                gCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCt      <  2:1774223/76‑1 (MQ=255)

                                                                gCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCt      <  1:3278270/76‑1 (MQ=255)

                                                                gCCCGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATACGGCt      >  2:3162883/1‑76 (MQ=255)

                                                                  ccGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCtca    <  1:3182701/76‑1 (MQ=255)

                                                                  ccGCACCTCTCCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCtca    <  1:1970996/76‑1 (MQ=255)

                                                                   cGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCtcat   <  1:2633208/76‑1 (MQ=255)

                                                                   cGCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGGAACGCCCCGGTGGCGGCGGGCGTCCTATCCGGCtcac   >  2:1486551/1‑75 (MQ=255)

                                                                   cGCACCTCTTCCGCGGCGCCTGCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCtcat   <  2:906309/76‑1 (MQ=255)

                                                                    gCACCTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCtcatc  >  1:4486374/1‑76 (MQ=255)

TTCAAACTCGGTGTTATTGGCTGCAATAGTGGCCGGATCGAGCGACGGTGCTGCGGCATCACCTGCCCGCACTTCTTCCGCTGCGCCTTCCGGCGGCTGCGTCGGTAACGCCTGGGTGGCGGCTGGCATCATATCAGGCTCATC  >  NC_000913/2429411‑2429554

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 6 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`