BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,751,091	G→C	A426P (GCT→CCT)	recN →	RecN

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,751,091	0	G	C	99.3%	370.1 / NA	143	A426P (GCT→CCT)	recN	RecN
Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (63/79); minor base T (1/0); total (64/79)
Fisher's exact test for biased strand distribution p-value = 4.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01

Only 100 of 144 total aligned reads displayed.

CATCACCTGGGCGCTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGGCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGTCATCACGGCGCGTA  >  NC_000913/2751019‑2751163

cATCACCTGGGCGCTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTa                                                                       <  2:792128/76‑1 (MQ=255)

cATCACCTGGGCGCTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTa                                                                       <  2:3424753/76‑1 (MQ=255)

 aTCACCTGGGCGCTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTAt                                                                      <  2:1273126/76‑1 (MQ=255)

  tCACCTGGGCGCTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTAtt                                                                     >  2:3959941/1‑76 (MQ=255)

      cTGGGCGCTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCa                                                                 >  1:3782059/1‑76 (MQ=255)

      cTGGGCGCTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCa                                                                 >  1:3636607/1‑76 (MQ=255)

        gggCGCTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCaaa                                                               <  1:2832493/76‑1 (MQ=255)

         ggCGCTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCCGCCTATCTCCaacg                                                              >  2:944106/1‑74 (MQ=255)

          gcgcTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGt                                                             >  2:2799512/1‑76 (MQ=255)

          gcgcTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGt                                                             <  1:3363853/76‑1 (MQ=255)

           cgcTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTc                                                            >  1:1207562/1‑76 (MQ=255)

           cgcTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTc                                                            <  1:146898/76‑1 (MQ=255)

           cgcTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTc                                                            >  1:2802701/1‑76 (MQ=255)

            gcTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCg                                                           >  1:1033709/1‑76 (MQ=255)

            gcTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCg                                                           <  2:2598914/76‑1 (MQ=255)

             cTGACGGTGCCGATCGTATTGAGTTTCGGGTCACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGc                                                          >  2:1887833/1‑76 (MQ=255)

             cTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGc                                                          <  1:930128/76‑1 (MQ=255)

             cTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGc                                                          <  1:2273210/76‑1 (MQ=255)

             cTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGc                                                          >  2:1867279/1‑76 (MQ=255)

              tGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCa                                                         >  2:1683677/1‑76 (MQ=255)

              tGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCa                                                         >  1:1154896/1‑76 (MQ=255)

              tGACGGTGCCGATCGTACTGATTTTCGGGTAACCACCAACCCACGCCAGCCACTGCATCCAACTGCCAAAACCGCa                                                         >  2:714293/1‑76 (MQ=255)

               gACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCAt                                                        >  1:4088518/1‑76 (MQ=255)

                 cGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATcc                                                      <  1:4480498/76‑1 (MQ=255)

                  ggggCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGCCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCg                                                     >  1:4106435/4‑76 (MQ=255)

                  ggTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCg                                                     >  1:1125707/1‑76 (MQ=255)

                    tGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCggg                                                   >  2:684405/1‑75 (MQ=255)

                    tGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATAGCCAAAGTCGCATCCggt                                                   >  1:3817963/1‑76 (MQ=255)

                     gctgATCGTATGGAGTTTCGGGTAACCCCCAACCGAGGTCTGCCAATGCAGCCTATTGCCACGGTCGCATCCggtg                                                  <  2:2588266/73‑1 (MQ=255)

                     gCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCggtg                                                  <  1:3579464/76‑1 (MQ=255)

                      ccGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCggtgg                                                 <  1:721343/76‑1 (MQ=255)

                         aTCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGa                                              <  1:4158351/76‑1 (MQ=255)

                         aTCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGa                                              <  1:659209/76‑1 (MQ=255)

                          tCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGaa                                             <  1:1391461/76‑1 (MQ=255)

                          tCGTAGTGAGTTTAGGGTAACCACTAACCCAGGTCAGCCAATGCAGCCTATTGCGAAAGATGCATCCGgtggtgca                                             >  2:2324359/1‑74 (MQ=255)

                          gcGTAGTGAGTGTCGGGTCACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGaa                                             <  2:125623/75‑1 (MQ=255)

                           cGTGTTGAGTTTCGGTTAACCACCAGCCCAGTTCAGCCAATGCAGCCTATTGCCAAAGTAGAATCCGGTGGTGAAt                                            <  2:1397338/76‑1 (MQ=255)

                           cGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGTCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAAt                                            <  2:3607021/76‑1 (MQ=255)

                           cGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAAt                                            <  1:2338244/76‑1 (MQ=255)

                           cGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAAt                                            >  2:3033263/1‑76 (MQ=255)

                           cGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCAGGTGGTGAAt                                            >  2:4413350/1‑76 (MQ=255)

                             tATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTg                                          >  1:3523044/1‑76 (MQ=255)

                              tttGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGt                                         <  1:4800567/75‑1 (MQ=255)

                              aTTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGt                                         <  1:3113602/76‑1 (MQ=255)

                               ttGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTc                                        <  1:4680622/76‑1 (MQ=255)

                               tggAGTGTCTGGTAACCACCACCACAGGTCAGCCACTGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTc                                        <  2:4229129/74‑1 (MQ=255)

                                 gAGTTTCGGGCAACCACCAACCCAGGGCAGCCAATGCAGCCTAGTGCCAAAGTCGCATCCGGTGGAGAATTGTccc                                      >  1:3942039/1‑76 (MQ=255)

                                  aGTTTCGGGTACCCTCCAACCCAGGTCAGCCGATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCg                                     <  2:3312202/76‑1 (MQ=255)

                                   gTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGc                                    >  1:2033840/1‑76 (MQ=255)

                                   gTTTCGGGTAACCACCAACCCAGGCCCCCCACCGCCGCCTACTGCCAAAGTCCCATACCGTCGTGAATTCTccccc                                    >  2:1082538/1‑74 (MQ=255)

                                     ttCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCAt                                  <  1:1583535/76‑1 (MQ=255)

                                     ttCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGCGGTGAATTGTCCCGCAt                                  >  1:469004/1‑76 (MQ=255)

                                         ggTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCa                              >  1:2083083/1‑76 (MQ=255)

                                         ggTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCa                              >  1:2433681/1‑76 (MQ=255)

                                           tAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCAca                            <  2:2874710/76‑2 (MQ=255)

                                           tAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACt                            >  1:2742516/1‑76 (MQ=255)

                                            aaCCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTg                           >  2:2954496/1‑76 (MQ=255)

                                            aaCCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTg                           <  2:4145519/76‑1 (MQ=255)

                                             accaccAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGCGCATTGTCCCGCATCGCACTgc                          >  2:3395694/1‑75 (MQ=255)

                                                  caACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATc                     >  1:3924042/1‑76 (MQ=255)

                                                  caACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATc                     >  1:3245645/1‑76 (MQ=255)

                                                   aaCCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATcc                    <  1:3891412/76‑1 (MQ=255)

                                                   aaCCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATcc                    <  1:1798977/76‑1 (MQ=255)

                                                   aaCCCAGGTCAGCCAATGCAGCCTATTGACAAAGTCGCATCCGGTGGTGAATGGTCCCGCATCGCACCGGCAAGcc                    >  1:112352/1‑76 (MQ=255)

                                                    ccccAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCa                   <  2:1068598/75‑1 (MQ=255)

                                                    aCCCAGTTCTGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCa                   <  1:4755696/76‑1 (MQ=255)

                                                    aCCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCa                   <  1:3619451/76‑1 (MQ=255)

                                                     gccAGGTCAGCAAATGCAGCCTATTGCCAGAGTCGCAGCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAg                  <  2:1505414/75‑1 (MQ=255)

                                                     cccAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAg                  <  1:2799512/76‑1 (MQ=255)

                                                     cccAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAg                  >  2:3053695/1‑76 (MQ=255)

                                                      ccAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAgg                 <  1:1742489/76‑1 (MQ=255)

                                                      ccAGGTCAGACAACGCGGTCTAGTGCCAAAGGCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAAGCCAgg                 >  1:3585775/1‑76 (MQ=255)

                                                       cAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGt                <  1:1470228/76‑1 (MQ=255)

                                                       cAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGt                <  1:2572112/76‑1 (MQ=255)

                                                       cAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGt                <  2:3446237/76‑1 (MQ=255)

                                                        aGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGtc               <  2:4433308/76‑1 (MQ=255)

                                                         ggTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGtca              <  2:3975569/76‑1 (MQ=255)

                                                         ggTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGtca              >  1:401430/1‑76 (MQ=255)

                                                          gTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGtcat             >  1:1945616/1‑76 (MQ=255)

                                                           tCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGtcatc            <  1:2665342/76‑1 (MQ=255)

                                                           tCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGtcatc            >  2:2467201/1‑76 (MQ=255)

                                                           tCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATCGTCCCGCATCGCACTCGCAATCCCGGtcatc            >  2:1608904/1‑76 (MQ=255)

                                                            cAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGtcatca           >  2:764920/1‑76 (MQ=255)

                                                            cAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGtcatca           >  2:4256821/1‑76 (MQ=255)

                                                             aGCCAATGCTGCCTATTGCCAGAGGCGCCTCCGGTGGTGACTTGTCCCGCATCGCGCTGGCAATCCAGGTCATCAc          <  1:3403259/76‑1 (MQ=255)

                                                             aGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGTCATCAc          <  1:2954496/76‑1 (MQ=255)

                                                               ccAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGTCATCACgg        <  1:2504415/76‑1 (MQ=255)

                                                               ccAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGTCATCACgg        <  2:4106522/76‑1 (MQ=255)

                                                               ccAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTCAATTGTCCCGCATCGCACTGGCAATCCAGGTCATCACgg        >  1:1012404/1‑76 (MQ=255)

                                                                cAATGCAGCCTATTGCCAAAGTCGCCTCCGGCGGTGAATTTGCACGCATCGCACTCGCAATCCTGGTCATCACTgc       >  1:2755003/1‑76 (MQ=255)

                                                                cAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGTCATCACGgc       >  1:2653299/1‑76 (MQ=255)

                                                                cAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGTCATCACGgc       >  1:2752663/1‑76 (MQ=255)

                                                                cAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGTCATCACGgc       >  2:58344/1‑76 (MQ=255)

                                                                cAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGTCATCACGgc       <  1:2182711/76‑1 (MQ=255)

                                                                cAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGTCATCACGgc       <  1:2038528/76‑1 (MQ=255)

                                                                 aaTGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGTCATCACGgcg      <  2:1401098/76‑1 (MQ=255)

                                                                 aaTGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGTCATCACGgcg      <  1:1061674/76‑1 (MQ=255)

                                                                 aaTGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGCCACCACGgcg      >  2:30768/1‑76 (MQ=255)

                                                                   tGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGTCATCACGGcgcg    <  2:3072143/76‑1 (MQ=255)

                                                                    gCAGCCGATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGTCATCACGGCGCGt   <  2:872393/76‑1 (MQ=255)

CATCACCTGGGCGCTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGGCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGTCATCACGGCGCGTA  >  NC_000913/2751019‑2751163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`