Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,823,915 A→G K21E (AAG→GAG)  srlA → PTS system, glucitol/sorbitol‑specific IIC component

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,823,9150AG100.0% 278.9 / NA 105K21E (AAG→GAG) srlAPTS system, glucitol/sorbitol‑specific IIC component
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (63/42);  total (63/42)

Only 100 of 105 total aligned reads displayed.

AAGGAGAGAACAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAAAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGAACGCACTG  >  NC_000913/2823843‑2823986
                                                                        |                                                                       
aaGGAGAGAACAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAgg                                                                      >  1:4853479/1‑76 (MQ=255)
 tggAGAGAACAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGgt                                                                     >  2:3649775/2‑76 (MQ=255)
 aGGAGAGAACAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAACGGGCGGAGAggg                                                                     >  2:2101291/1‑75 (MQ=255)
  ggAGAGAACAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGgtg                                                                    >  1:3846038/1‑76 (MQ=255)
  ggAGAGAACAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGgtg                                                                    >  1:3056433/1‑76 (MQ=255)
    agagaACAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGtt                                                                  <  2:1908786/76‑1 (MQ=255)
    agagaACAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGtt                                                                  <  2:4506929/76‑1 (MQ=255)
     gagaACAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGttt                                                                 <  1:200932/76‑1 (MQ=255)
      agaACAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCACAAGGGCGGAGCGGGGTTTa                                                                >  1:535826/1‑76 (MQ=255)
      agaACAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTa                                                                >  1:502646/1‑76 (MQ=255)
      agaACAATGATAGAAACCATTACTCATGGCGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTa                                                                >  1:2669986/1‑76 (MQ=255)
         aCAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCg                                                             <  1:4466416/76‑1 (MQ=255)
         aCAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCg                                                             >  1:65077/1‑76 (MQ=255)
            aTGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGa                                                          >  1:2440836/1‑76 (MQ=255)
             tGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGAt                                                         >  1:612736/1‑76 (MQ=255)
             tGATAGAAACCATTACTCATGGTCCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGAt                                                         >  1:1916828/1‑76 (MQ=255)
              gATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATg                                                        <  1:2599299/76‑1 (MQ=255)
              gATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATg                                                        >  1:587460/1‑76 (MQ=255)
               aTAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATgg                                                       <  2:4682730/76‑1 (MQ=255)
               aTAGAAACAATTACTCATGGTTCAGAGTGGTGTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATgg                                                       <  2:4724117/76‑1 (MQ=255)
                tAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGt                                                      <  2:2031637/76‑1 (MQ=255)
                tAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGt                                                      <  2:2005902/76‑1 (MQ=255)
                aaGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGt                                                      <  2:2382853/75‑1 (MQ=255)
                 aGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTg                                                     >  1:946753/1‑76 (MQ=255)
                   aaaCCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGAc                                                   >  2:3650420/1‑76 (MQ=255)
                    aaCCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGAcc                                                  <  1:4680940/76‑1 (MQ=255)
                      ccATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCgg                                                >  2:812269/1‑76 (MQ=255)
                      ccATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCgg                                                >  2:4832604/1‑76 (MQ=255)
                       cATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGc                                               >  1:1836939/1‑76 (MQ=255)
                        aTTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCa                                              <  1:227169/76‑1 (MQ=255)
                          tACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGCCCGGCAtt                                            <  2:85519/76‑1 (MQ=255)
                          tACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCAtt                                            <  1:1619738/76‑1 (MQ=255)
                          tACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCAtt                                            >  2:1045062/1‑76 (MQ=255)
                          tACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCAtt                                            >  2:4637127/1‑76 (MQ=255)
                          tACTCATGGGGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCAtt                                            >  1:4600194/1‑76 (MQ=255)
                           aCTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCAttc                                           >  1:3903869/1‑76 (MQ=255)
                           aCTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTGACCGGGATGGCGACAGGCAtac                                           >  1:4848867/1‑74 (MQ=255)
                             tCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCAttctt                                         >  2:800533/1‑76 (MQ=255)
                             tCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAACGGCGGAGAGGTGTTTACCGGGACGGTGACCGGCCttcgt                                         >  2:2362826/1‑74 (MQ=255)
                             tCATGGTGCAGAGGGGTTTATCGGACTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGTTGACCGGCAttcgt                                         >  2:2345941/1‑74 (MQ=255)
                              cATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCAttcttc                                        >  1:3245586/1‑76 (MQ=255)
                              cATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCAttcttc                                        >  2:3956162/1‑76 (MQ=255)
                               aTGGCGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTcc                                       >  1:1038829/1‑76 (MQ=255)
                                 ggTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGc                                     >  2:1709060/1‑76 (MQ=255)
                                 cgggCAGCGTGGTTTATCGGGATGTTCCAAAAGGGAGGAGAGGTGTTGACCGGGATGGTGACCGGCATTCTTCCGc                                     >  1:4623715/4‑76 (MQ=255)
                                 cgTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGc                                     >  1:4615764/2‑76 (MQ=255)
                                  gTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCt                                    <  2:993981/76‑1 (MQ=255)
                                  gTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCt                                    >  1:1076129/1‑76 (MQ=255)
                                   tGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTg                                   >  2:1580622/1‑76 (MQ=255)
                                   tGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTg                                   >  1:956269/1‑76 (MQ=255)
                                    gCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGt                                  <  1:2812755/76‑1 (MQ=255)
                                     cAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGtt                                 <  1:3163417/76‑1 (MQ=255)
                                      agagTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTg                                <  1:184483/76‑1 (MQ=255)
                                      agagTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTg                                >  2:1206571/1‑76 (MQ=255)
                                      agagTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTg                                <  2:1329190/76‑1 (MQ=255)
                                        agTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGAt                              <  1:3555282/76‑1 (MQ=255)
                                          tGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTa                            >  2:547781/1‑76 (MQ=255)
                                          tGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTa                            >  1:2067792/1‑76 (MQ=255)
                                           ggTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAg                           >  2:4282799/1‑76 (MQ=255)
                                           ggTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAg                           >  2:1361802/1‑76 (MQ=255)
                                           ggTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAg                           >  2:1362199/1‑76 (MQ=255)
                                             tttATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGcc                         <  1:13682/76‑1 (MQ=255)
                                             tttATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGcc                         >  2:4782891/1‑76 (MQ=255)
                                              ttATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCct                        >  1:3565687/1‑76 (MQ=255)
                                              ttATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCct                        <  1:497871/76‑1 (MQ=255)
                                               tATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCctg                       >  1:1339355/1‑76 (MQ=255)
                                               tATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCctg                       >  1:4457050/1‑76 (MQ=255)
                                                aTCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCctgc                      >  2:3188857/1‑76 (MQ=255)
                                                 tctggCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCctgct                     <  1:1999138/73‑1 (MQ=255)
                                                 tCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCctgct                     <  2:734347/76‑1 (MQ=255)
                                                  cGGGCTGTTGTAAAAGGGCTGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCctgctg                    <  2:371176/76‑1 (MQ=255)
                                                  cGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCctgctg                    <  1:2998888/76‑1 (MQ=255)
                                                   gggCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTgg                   <  2:3062113/76‑1 (MQ=255)
                                                    ggCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGt                  <  1:937140/76‑1 (MQ=255)
                                                    ggCTCTTCCAAAAGTGCGTAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGt                  <  1:959232/76‑1 (MQ=255)
                                                     gCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGtt                 <  2:2733409/76‑1 (MQ=255)
                                                     gCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGtt                 >  1:440990/1‑76 (MQ=255)
                                                      cTGTTCCAAAAGGGCGGAGAGGTGTTTATCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGttt                >  2:4612885/1‑75 (MQ=255)
                                                      cTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTa                >  1:821484/1‑76 (MQ=255)
                                                      cTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTa                <  1:1580623/76‑1 (MQ=255)
                                                        gTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATc              >  1:3352356/1‑76 (MQ=255)
                                                          tCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCAt            >  1:170994/1‑76 (MQ=255)
                                                          tCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCAt            >  1:667519/1‑76 (MQ=255)
                                                           ccAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATg           <  1:3681380/76‑1 (MQ=255)
                                                            cAAAAGGGCGGAGAGGTGTTTCCCGTGATGGCGACCGTCATTCTTCCGCTGTTGATTCGCCTGCTGGTTATCATGa          <  2:2964644/76‑1 (MQ=255)
                                                            cAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGa          <  2:167037/76‑1 (MQ=255)
                                                            cAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGa          <  1:1357424/76‑1 (MQ=255)
                                                             aaaaGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGaa         >  2:3104967/1‑76 (MQ=255)
                                                             aaaaGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTCCTGGTTATCATGac         >  2:216402/1‑75 (MQ=255)
                                                             aaaaGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTCCCGCTGTTGATTAGCCTGCTGGTTATCCTGac         >  2:70294/1‑75 (MQ=255)
                                                              aaaGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGAAc        <  1:2101292/76‑1 (MQ=255)
                                                              aaaGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGAAc        >  1:3514730/1‑76 (MQ=255)
                                                               aaGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGAACg       <  1:4860877/76‑1 (MQ=255)
                                                                aGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGAACGc      >  2:3126443/1‑76 (MQ=255)
                                                                aGGGCGGAGAGGTGTTTACCGGGATGGCGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGAACGc      >  1:351988/1‑76 (MQ=255)
                                                                   gCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGAACGCACt   <  1:597960/76‑1 (MQ=255)
                                                                   gCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGCTATCATGAACGCACt   >  1:3547251/1‑76 (MQ=255)
                                                                    cGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGAACGCACTg  <  2:1805662/76‑1 (MQ=255)
                                                                    cGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGAACGCACTg  <  1:1069934/76‑1 (MQ=255)
                                                                    cGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGAAAGCACTg  >  2:929902/1‑76 (MQ=255)
                                                                        |                                                                       
AAGGAGAGAACAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAAAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGAACGCACTG  >  NC_000913/2823843‑2823986

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: