| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,950,557 | 2 bp→GC | coding (451‑452/930 nt) | ilvE → | branched‑chain amino‑acid aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,950,557 | 0 | C | G | 100.0% | 279.4 / NA | 111 | R151A (CGA→GCA) | ilvE | branched‑chain amino‑acid aminotransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (59/52); total (59/52) | |||||||||||
| * | NC_000913 | 3,950,558 | 0 | G | C | 100.0% | 296.3 / NA | 111 | R151A (CGA→GCA) | ilvE | branched‑chain amino‑acid aminotransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (59/52); total (59/52) | |||||||||||
Only 100 of 111 total aligned reads displayed.
GGAGCGTATCTGGGCGCAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCACGACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTCCCTGCTGGTGGGTAGCG > NC_000913/3950488‑3950626 || ggAGCGTATCTGGGCGCAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCaa > 2:871988/1‑76 (MQ=255) gCGTATCTGGGCGCAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAaca < 1:1675131/76‑1 (MQ=255) tATCTGGGCGCAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCa < 1:4603936/76‑1 (MQ=255) aTCTGGGCGCAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCAt < 1:1899566/76‑1 (MQ=255) tCTGGGCGCAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATc < 2:3067976/76‑1 (MQ=255) cTGGGCGCAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGCACCGCGCAGCCCCAAACACCATcc < 2:1144837/76‑1 (MQ=255) cTGGGCGCAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATcc > 1:4275379/1‑76 (MQ=255) cTGGGCGCAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATcc > 2:2536743/1‑76 (MQ=255) cTGGGCGCAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATcc < 1:2349242/76‑1 (MQ=255) cTGGGCGCAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTCTCCTCCTGGAACCGCGCAGCACCAAACACCATcc > 1:1933823/1‑76 (MQ=255) ggggAGCAGAAGCGCTGGAGCAGGAGTGCGATGCGCTGGTTTCCTCCCGGTACCGCGCAGCACCAAACACCATccc < 2:4824556/75‑1 (MQ=255) gggCGCAGAAGCGCTGGAGCAGGTGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCg < 1:1544951/76‑1 (MQ=255) gggCGCAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCg < 1:2072359/76‑1 (MQ=255) gggCGCAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCg > 1:3649137/1‑76 (MQ=255) gcgcAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGAc < 1:3007683/76‑1 (MQ=255) gcgcAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGAc > 1:3200187/1‑76 (MQ=255) gcgcAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGAc < 1:2874860/76‑1 (MQ=255) gcgcAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGAc < 1:2523730/76‑1 (MQ=255) gcgcAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGAc < 1:1557671/76‑1 (MQ=255) cgcAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGAcg < 2:2353842/76‑1 (MQ=255) gcAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGAcgg > 1:1577259/1‑76 (MQ=255) gcAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGAcgg > 1:2273999/1‑76 (MQ=255) cAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGAcggc > 1:383911/1‑76 (MQ=255) cAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGAcggc > 2:4613265/1‑76 (MQ=255) aGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGAcggcg < 2:2042887/76‑1 (MQ=255) aGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGAcggcg < 2:1084024/76‑1 (MQ=255) aGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGAcggcg > 1:68758/1‑76 (MQ=255) gAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGAcggcgg > 1:2664104/1‑76 (MQ=255) gAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGAcggcgg < 1:4613265/76‑1 (MQ=255) aaGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACggcggc > 1:362401/1‑76 (MQ=255) gcgcTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCaa > 2:1374457/1‑76 (MQ=255) gcgcTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCaa > 1:3845394/1‑76 (MQ=255) gcgggAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCaaaa < 2:4844095/73‑1 (MQ=255) gcgggAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCaaaa < 2:415558/73‑1 (MQ=255) gcTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCaaag > 1:3699422/1‑75 (MQ=255) gcTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCaaaa > 2:1389072/1‑76 (MQ=255) gcTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCaaaa > 1:4342227/1‑76 (MQ=255) cTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACTATCCCGACGGCGGCAAAAg > 1:1597859/1‑76 (MQ=255) cTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAg > 2:1739052/1‑76 (MQ=255) tGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCTAAAGc > 2:3416404/1‑76 (MQ=255) tGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGc < 2:3072846/76‑1 (MQ=255) tGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGc > 2:3755230/1‑76 (MQ=255) tGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACCGCCGCAAAAGc > 2:2017855/1‑76 (MQ=255) nggAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGc > 2:2447609/2‑76 (MQ=255) ggAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCCAAAGcc > 2:4677535/1‑76 (MQ=255) ggAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGcc > 1:2663830/1‑76 (MQ=255) gAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCg < 1:3730066/76‑1 (MQ=255) aGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCgg < 1:3042310/76‑1 (MQ=255) gcgggggATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCggt < 2:1206271/73‑1 (MQ=255) gCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCggt < 2:3703479/76‑1 (MQ=255) cAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCggtg > 2:849501/1‑76 (MQ=255) aGGGGGTCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCggtgg < 2:4558494/76‑1 (MQ=255) ggggATCTCTGCGATGGTTTCCGCCTGGAACCGCACAGCACCAAACACCATCCCGACGTCGGCAAAAGCCggtggt < 2:3794440/76‑1 (MQ=255) gggATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTa < 2:2353400/76‑1 (MQ=255) gggATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTa < 2:2476416/76‑1 (MQ=255) ggATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTaa > 1:3162999/1‑76 (MQ=255) gctCGATGCGCTGATTGCCTCCTGGAGCCGCTCAGCACCAAACACCATCCCTACGGCGGCAAAAGCCGGTGGTAAc < 1:2563128/74‑1 (MQ=255) gATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAAc > 1:2910800/1‑76 (MQ=255) gATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGCGGTCAc > 2:3647271/1‑76 (MQ=255) aTCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACt > 1:3353345/1‑76 (MQ=255) tCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTa > 1:2395556/1‑76 (MQ=255) cgatgcgatgGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACCAc > 2:697390/1‑76 (MQ=255) gatgcgatgGTTTCCTCCTCGAACCGCGCAGCACCAAACACCACCCCGACGGCGGCAACAGCAGGCGTGAACTAcc > 2:1739670/1‑76 (MQ=255) gtgcgaggGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACct < 2:1539492/75‑1 (MQ=255) atgcgatgGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACct < 1:2473620/76‑1 (MQ=255) tgcgatgGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACctc > 1:3134474/1‑76 (MQ=255) gcgatgGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCACAAGCCGGTGGTAACTACctct > 1:2690692/1‑76 (MQ=255) cgatgGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACctctc > 1:39029/1‑76 (MQ=255) cgatgGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACctctc < 2:2720012/76‑1 (MQ=255) cgatgGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACctctc > 2:2099722/1‑76 (MQ=255) cgatgGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACctctc > 1:3337733/1‑76 (MQ=255) gatgGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTCACTCCctctct > 2:1450141/1‑76 (MQ=255) gatgGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACctctct > 1:2370340/1‑76 (MQ=255) gatgGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGGAACTACctctct > 1:1074281/1‑76 (MQ=255) atgGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGCAACTACCTCTCtt > 2:2324084/1‑76 (MQ=255) atgGTTTCCCCCTGGAACCGCGCAGCACCAAACACCACCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCtt < 2:1159649/76‑1 (MQ=255) tgGTTCCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTc < 1:4529444/76‑1 (MQ=255) gggTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTc < 2:1667862/75‑1 (MQ=255) ggTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTcc < 1:2369232/76‑1 (MQ=255) gTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTccc < 1:1077637/76‑1 (MQ=255) gTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTccc > 1:1657733/1‑76 (MQ=255) gTTTCCTCCGGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTccc < 2:1125585/76‑1 (MQ=255) tttCCTCCTGGAACCGCGCAGCACCAAACCCCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTCCct < 1:2829833/76‑1 (MQ=255) tttCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTCCct < 1:889260/76‑1 (MQ=255) tttCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTCCct > 1:1966155/1‑76 (MQ=255) ttCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGCAACTACCTCTCTTCCctg > 2:800024/1‑76 (MQ=255) tcctccGGGACCCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTCCctgc < 2:1848171/76‑1 (MQ=255) cctcctGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTCCctgct < 1:3746752/76‑1 (MQ=255) cctcctGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTCCctgct > 1:1831480/1‑76 (MQ=255) ctcctGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTCCccgctg > 2:1034653/1‑76 (MQ=255) ccctGGACCCGCGCAGCCCCAAACACCACCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTCCCTGCtgg < 1:621936/75‑1 (MQ=255) cctGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTCCCTGCtggg > 1:924844/1‑75 (MQ=255) ggAACCGCGCAGCACCAAACACCATCCCGACGGACGCAAAAGCCGGCCGGAACTACCTCTCTTCCctgctgctgtg > 2:4080399/1‑74 (MQ=255) gacccGCGCAGCACCAAACACCATCCCGACGGCGGAAAAAGCCGGTGGTAACTACCTCTCTTCCCTGCTGGTGGGt < 1:75610/73‑1 (MQ=255) acccGCGCAGCACCAAACCCCACCCCGCCGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTCCCTGCTGGTGGGTa < 1:4511423/74‑1 (MQ=255) aaCCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTCCCTGCTGGTGGGTa > 1:1607573/1‑76 (MQ=255) aaCCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGACGGTGGTAACTACCTCTCTTCCCTGCTGGTGGGTa > 1:3120020/1‑76 (MQ=255) aCCGCGCAGCACCAAACCCCACCCCGGCGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTCCCTGCTGGTGGGTAg < 2:2073163/76‑1 (MQ=255) ccGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGGAACTACCTCTCCTCCCTGCTGGTGGGTAGc > 2:2047169/1‑76 (MQ=255) cgcgCAGCACCAAACACCACCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTCCCTGCTGGTGGGTAGCg < 2:2273998/76‑1 (MQ=255) || GGAGCGTATCTGGGCGCAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCACGACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTCCCTGCTGGTGGGTAGCG > NC_000913/3950488‑3950626 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |