| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,741,574 | 2 bp→GA | coding (94‑95/1374 nt) | ydhE → | putative transport protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,741,574 | 0 | A | G | 100.0% | 211.3 / NA | 83 | S32D (AGT→GAT) | ydhE | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (51/32); total (51/32) | |||||||||||
| * | NC_000913 | 1,741,575 | 0 | G | A | 100.0% | 242.1 / NA | 83 | S32D (AGT→GAT) | ydhE | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (51/32); total (51/32) | |||||||||||
GCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCAGTACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGG > NC_000913/1741504‑1741642 || gcgTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATAcc > 1:884884/1‑76 (MQ=255) tCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTg > 1:3278731/1‑76 (MQ=255) cTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGa < 1:2933133/76‑1 (MQ=255) tttattaGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATCCCGTGATg > 2:1803964/2‑76 (MQ=255) gTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATg < 2:927697/76‑1 (MQ=255) gTTATTAGCATTAGCAATCCCGGTGATCCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGAtc > 2:3065633/1‑75 (MQ=255) ttattaGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATgg > 2:2403820/1‑76 (MQ=255) tattaGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGCCGATACCGTGACggc > 2:4590247/1‑76 (MQ=255) attagcattagcAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATggcg > 2:998924/1‑76 (MQ=255) attagcattagcAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATggcg > 2:3184321/1‑76 (MQ=255) ttagcattagcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGAcggcgg > 1:4213542/1‑76 (MQ=255) ttagcattagcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATggcgg < 1:133619/76‑1 (MQ=255) tagcattagcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATggcggg > 2:2416911/1‑76 (MQ=255) tagcattagcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATggcggg > 2:1370896/1‑76 (MQ=255) tagcattagcaACCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATggcggg > 2:66141/1‑76 (MQ=255) agcattagcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATggcgggc < 1:1476976/76‑1 (MQ=255) agcattagcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATggcgggc < 1:1219762/76‑1 (MQ=255) gcattagcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATggcgggcg > 1:635531/1‑76 (MQ=255) gcattagcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATggagggcg > 1:3358780/1‑76 (MQ=255) cattagcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGgcgggcgg > 2:225941/1‑76 (MQ=255) tagcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCta < 1:3030893/76‑1 (MQ=255) tagcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCta > 1:4059771/1‑76 (MQ=255) agcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCtat < 1:2677927/76‑1 (MQ=255) agcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCtat < 1:3596922/76‑1 (MQ=255) gcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCtata < 2:1698257/76‑1 (MQ=255) caATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAg > 1:4868710/1‑76 (MQ=255) aaTCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAgg > 2:3731748/1‑75 (MQ=255) aaTCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGt > 1:2281754/1‑76 (MQ=255) tCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGc > 1:2205167/1‑76 (MQ=255) ccGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCa > 1:1012623/1‑76 (MQ=255) ccGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCa < 1:1964204/76‑1 (MQ=255) cGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCCTTATTGcccc > 2:278154/1‑74 (MQ=255) ggTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCAcc > 2:2188707/1‑76 (MQ=255) ggTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCAcc > 1:3152340/1‑76 (MQ=255) ggTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCAcc > 1:3402298/1‑76 (MQ=255) ggTGATTCTCGCGCAAATAGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCAcc > 1:3591994/1‑76 (MQ=255) gTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCg < 1:619413/76‑1 (MQ=255) gATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCgga > 1:4588867/1‑74 (MQ=255) gATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGAc < 1:2807005/76‑1 (MQ=255) gATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGAc > 2:2181141/1‑76 (MQ=255) gATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGAc > 1:2816435/1‑76 (MQ=255) aTTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACa > 2:3057989/1‑76 (MQ=255) aTTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACa > 1:2620078/1‑76 (MQ=255) aTTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACa < 1:799862/76‑1 (MQ=255) tctcGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGGGGCTATAGGGACACCGAccag > 1:4269458/1‑73 (MQ=255) tctcGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATg > 2:2561707/1‑76 (MQ=255) ctcGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATgg > 2:2780867/1‑76 (MQ=255) ctcGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATgg > 1:3530731/1‑76 (MQ=255) tcGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggc < 1:2520982/76‑1 (MQ=255) tcGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggc < 1:2810330/76‑1 (MQ=255) tcGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggc < 1:3345828/76‑1 (MQ=255) cgcgCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggcg < 1:771088/76‑1 (MQ=255) cgcgCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggcg < 2:1268361/76‑1 (MQ=255) gcgcCAATCGCCCGAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggctg < 2:3591994/76‑3 (MQ=255) gcgcAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggcgg < 2:3180128/76‑1 (MQ=255) gcgcAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGAGGGCGGGCGGCCAGAGTGCCACCGACATggcgg > 2:3268264/1‑76 (MQ=255) cgcAAATCGCCCAAACTGCGATGGGTTTTGTCGATCCCGTGATGGGGGGGGGCTATAGGGCCCCCGACAggggggg > 2:1459486/1‑75 (MQ=255) cgcAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggcggg > 1:2365737/1‑75 (MQ=255) cgcAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggcggc > 1:2359507/1‑76 (MQ=255) cgcAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggcggc > 1:3000019/1‑76 (MQ=255) gcAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGgcggcg < 2:2242995/76‑1 (MQ=255) cAAATCGCCCAAACTGCGATGGGCTTTGTCGATACCGTGATGGCGGGCGGCCAGCGGGCCCCCGACATGGcggggg > 2:4647771/1‑76 (MQ=255) aaaTCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGcggcggg > 1:838467/1‑75 (MQ=255) aaaTCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGGGCCACCGACATGGcgggggg > 2:1307186/1‑75 (MQ=255) aaTCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTc < 1:1953909/76‑1 (MQ=255) tCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGc < 1:3642186/76‑1 (MQ=255) ccGCCCAACCTGCGATGGTTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGc < 1:1459487/75‑1 (MQ=255) cGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCt < 2:3278731/76‑1 (MQ=255) cGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGGCGCt > 1:3875160/1‑76 (MQ=255) gCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCCCCCACATGGCGGCGGgcgcgc > 2:803924/1‑74 (MQ=255) ccAAACTGGGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATc < 1:299334/76‑1 (MQ=255) ccAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGGCGGTAtt > 1:3044930/1‑75 (MQ=255) aaaCTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCgg < 2:2516277/76‑1 (MQ=255) aaaCTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGGGGCTTTCgg > 1:2528816/1‑76 (MQ=255) aCTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTa < 1:2934692/76‑1 (MQ=255) tGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGGACt > 1:2589704/1‑76 (MQ=255) gCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGGCGCCTTTGGTACtt > 1:842193/1‑76 (MQ=255) gCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGGCGCCATCGGGACtt > 1:1026852/1‑76 (MQ=255) tGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTAt < 1:2188708/76‑1 (MQ=255) gggTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATc < 1:2561707/76‑1 (MQ=255) aggTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGGCGCTCTCGGGACTTCTATc > 2:1758879/2‑76 (MQ=255) gTTTTGTCGATACGGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTg < 1:680298/76‑1 (MQ=255) ttttGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATTGGTACTTCTATCTgg < 2:3396191/76‑1 (MQ=255) || GCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCAGTACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGG > NC_000913/1741504‑1741642 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |