| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 315232 = | NA (NA) | 3 (0.150) | 3/92 | NT | NA | coding (422/867 nt) | insF | IS3 element protein InsF |
| ? | W3110S.gb | 315255 = | NA (NA) | coding (445/867 nt) | insF | IS3 element protein InsF | |||||
GCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/315306‑315232‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atctgGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAA > W3110S.gb/315255‑315323 GCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCA < 1:901858/71‑1GCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCA < 1:1128512/71‑1GCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCA < 1:1179144/71‑1GCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCA < 1:415584/71‑1 CGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCAT < 1:1117365/71‑1 CGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCAT > 1:355709/1‑71 CGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCA > 1:802908/1‑70 GACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATC > 1:1012823/1‑71 GACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCAT < 1:116036/70‑1 ACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCT > 1:1417015/1‑71 ACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCT < 1:290733/71‑1 ACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCT < 1:821433/71‑1 ACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCT > 1:888934/1‑71 ACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATC > 1:1180179/1‑70 CATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTG > 1:550731/1‑71 CATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTG > 1:690486/1‑71 CATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTG > 1:1847051/1‑71 CATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTG > 1:1787558/1‑71 CATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTG < 1:1659074/71‑1 CATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTG > 1:1569462/1‑71 CATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTG > 1:1083436/1‑71 CATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTG > 1:1154217/1‑71 ATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTG > 1:90110/1‑70 ATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTG > 1:1328534/1‑70 ATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTG > 1:1183657/1‑70 ATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTG > 1:268386/1‑70 TGACCAGCCAATAACGGCACGTGACCAAAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCT > 1:542615/1‑67 AGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATC > 1:1996910/1‑61 CCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCAT < 1:1205997/58‑1 AATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCT > 1:1343471/1‑58 TAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCAT < 1:1107016/54‑1 TAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCAT < 1:1142353/54‑1 CGGCACGTGACCACAGGTCATTGACCACTGCCAGATACAGCCAGCCTTCATC < 1:555944/52‑1 GTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCA > 1:1177377/1‑44 CACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCAT > 1:1096907/1‑40 CAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCA > 1:152384/1‑37 AGGTCAATGACCACTGCCAGATACAGCCAGCCTTCAT > 1:1864607/1‑37 GTCAATGACCACTGCCAGATACAGCCAGCCTTCAT < 1:1699900/35‑1 AGATACAGCCAGCCTTCATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGT > 1:137236/1‑71 GATACAGCCAGCCTTCATCTGGGAGTGGTCATTGACCTGTGGTCACGTGCCGTTAT > 1:772639/1‑56 ACAGCCAGCCTTCATCTGGCAGTGGTCATTGACCTGTGGTCAC < 1:435957/43‑1 ATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCG > 1:1334823/1‑71 ATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCG > 1:494817/1‑71 ATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCG > 1:1333661/1‑71 ATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAAT > 1:1363566/1‑52 TCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTC > 1:1314824/1‑54 TCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAAT < 1:1128447/51‑1 TCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTC > 1:629279/1‑48 TCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGG < 1:1169814/46‑1 TCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATT < 1:572136/40‑1 TCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATT < 1:407721/40‑1 CTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGC > 1:1855452/1‑70 CTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCA > 1:2006137/1‑57 TGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAA > 1:325612/1‑71 TGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGAC < 1:280308/64‑1 GCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/315306‑315232‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atctgGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAA > W3110S.gb/315255‑315323 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |