| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 468217 = | 21 (0.920) | 4 (0.200) | 3/90 | NT | 18.0% | coding (123/1773 nt) | mdlA | fused predicted multidrug transporter subunits and ATP‑binding components of ABC superfamily |
| ? | W3110S.gb | 468244 = | 18 (0.900) | coding (150/1773 nt) | mdlA | fused predicted multidrug transporter subunits and ATP‑binding components of ABC superfamily | |||||
ATCAGCACCATGGTGGCGATCCACATCAGGATCTGCCCGGTAGTAAAGTGTTGTTCTGTCACGCCATCGACAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/468291‑468217‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaacaCTTTACTACCGGGCAGATCCTGATGTGGATCGCCACCATGGTGCTGATTGCCGTTGTGGTTTATCTCCTG > W3110S.gb/468244‑468313 ATCAGCACCATGGTGGCGATCCACATCAGGATCTGCCCGGTAGTAAAGTGTTGTTCTGTCACGCCATCGA > 1:46374/1‑70 TCAGCACCATGGTGGCGATCCACATCAGGATCTGCCCGGTAGTAAAGTGTTGTTCTGTCACGCCATCGAC > 1:1997089/1‑70 AGCACCATGGTGGCGATCCACATCAGGATCTGCCCGGTAGTAAAGTGTTGTTCTGTCACGCCATCGACAAC < 1:83887/71‑1 CATCAGGATCTGCCCGGTAGTAAAGTGTTGTTCTGTCACGCCATCGACAA < 1:408904/50‑1 AGTGTTGTTCTGTCACGCCATCGACAACACTTTACTACCGGGCAGATCCTGATG < 1:1486703/54‑1 AGTGTTGTTCTGTCACGCCATCGACAACACTTTACTACCGGGCAGATCCTGATG < 1:1991348/54‑1 TGTTGTTCTGTCACGCCATCGACAACACTTTACTACCGGGCAGATCCTGATGTGGA < 1:1586176/56‑1 GTTCTGTCACGCCATCGACAACACTTTACTACCGGGCAGATCCTG < 1:769505/45‑1 ACAACACTTTACTACCGGGCAGATCCTGATGTGGATCGCCACCATGGTGCTGATTGCCGTTGTGGTTTATC < 1:1109747/71‑1 ACAACACTTTACTACCGGGCAGATCCTGATGTGGATCGCCACCATGGTGCTGATTGCCGTTGTGGTTTATC > 1:972036/1‑71 AACACTTTACTACCGGGCAGATCCTGATGTGGATCGCCACCATGGTGCTGATTGCCGTTGTGGTTTATC < 1:1091794/69‑1 ACACTATACTACCGGGCAGATCCTGATGTGGATCGCCACCATG > 1:1872284/1‑43 CACTTTACTACCGGGCAGATCCTGATGTGGATCGCCACCATGGTGCTGATTGCCGTTGTGGTTTATCTCCT > 1:1337190/1‑71 ACTTTACTACCGGGCAGATCCTGATGTGGATCGCCACCATGGTCCTGATTGCCGTTGTGGTTTATCTCCTG < 1:984076/71‑1 ATCAGCACCATGGTGGCGATCCACATCAGGATCTGCCCGGTAGTAAAGTGTTGTTCTGTCACGCCATCGACAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/468291‑468217‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaacaCTTTACTACCGGGCAGATCCTGATGTGGATCGCCACCATGGTGCTGATTGCCGTTGTGGTTTATCTCCTG > W3110S.gb/468244‑468313 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |