| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3098949 | 30 (1.320) | 3 (0.150) | 3/92 | NT | 10.0% | coding (436/1047 nt) | ansB | periplasmic L‑asparaginase II |
| ? | W3110S.gb | = 3098965 | 27 (1.310) | coding (420/1047 nt) | ansB | periplasmic L‑asparaginase II | |||||
ATCAGCTGCGGTCACTACCGCGTTATACAGGTTGAATGGACCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3098905‑3098949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgtcCACGTCTATGAGCGCAGACGGTCCATTCAACCTGTATAACGCGGTAGTGACCGCAGCTGATAAAGC < W3110S.gb/3098965‑3098900 ATCAGCTGCGGTCACTACCGCGTTATACAGGTTGAATGGAC > 1:724633/1‑41 TCAGCTGCGGTCACTACCGCGTTATACAGGTTGAATGGACCGTCCACGTCTATGAGCGCAGA < 1:1016284/62‑1 AGCTGCGGTCACTACCGCGTTATACAGGTTGAATGGACCGTCCACGTCTATGAGCGCAGAC < 1:1155470/61‑1 CGTTATACAGGTTGAATGGACCGTCCACGTCTATGAGCGCAGACG < 1:433183/45‑1 CCGTCCACGTCTATGAGCGCAGACGGTCCATTCAACCTGTATAACGCGGTAGTGACCGCAGCTGATAAAGC > 1:148166/1‑71 ATCAGCTGCGGTCACTACCGCGTTATACAGGTTGAATGGACCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3098905‑3098949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgtcCACGTCTATGAGCGCAGACGGTCCATTCAACCTGTATAACGCGGTAGTGACCGCAGCTGATAAAGC < W3110S.gb/3098965‑3098900 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |