New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	4480518 =	28 (1.230)	4 (0.190)	3/96	NT	11.7%	coding (400/1815 nt)	yjgL	hypothetical protein
	?	W3110S.gb	4480541 =	34 (1.590)					coding (423/1815 nt)	yjgL	hypothetical protein

TCTTTCAAAGGACTTCCCTTCATAACGGTTAGTCGAACCATCAGGTTGTGGAAATATAATGGCTGTATGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/4480589‑4480518 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccACAACCTGATGGTTCGACTAACCGTTATGAAGGGAAGTCCTTTGAAAGAAAA  >  W3110S.gb/4480541‑4480592                                                                                                                              TCTTTCAAAGGACTTCCCTTCATAACGGTTAGTCGAACCATCAGGTTGTGGAAATATAATGGCTGTATGT                                                        <  1:1103770/70‑1                                                  GGAAATATAATGGCTGTATGTCCACAACCTGATGGTTCGACTAACCGTTATGAAGGG                    <  1:1660089/57‑1                                                  GGAAATATAATGGCTGTATGTCCACAACCTGATGGTTCGACTAACCGTTATGAAGGG                    <  1:775435/57‑1                                                  GGAAATATAATGGCTGTATGTCCACAACCTGATGGTTCGACTAACCG                              <  1:1707801/47‑1                                                   GAAATATAATGGCTGTATGTCCACAACCTGATGGT                                         <  1:1597716/35‑1                                                                        CACAACCTGATGGTTCGACTAACCGTTATGAAGGGAAGTCCTTTGAAAGAAAA  <  1:77755/53‑1                                                                                                                              TCTTTCAAAGGACTTCCCTTCATAACGGTTAGTCGAACCATCAGGTTGTGGAAATATAATGGCTGTATGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/4480589‑4480518 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccACAACCTGATGGTTCGACTAACCGTTATGAAGGGAAGTCCTTTGAAAGAAAA  >  W3110S.gb/4480541‑4480592

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.