| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1311245 | 17 (0.750) | 3 (0.150) | 3/88 | NT | 18.4% | coding (739/1254 nt) | kch | voltage‑gated potassium channel |
| ? | W3110S.gb | = 1311272 | 12 (0.610) | coding (712/1254 nt) | kch | voltage‑gated potassium channel | |||||
GATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAATGATCTTTACGATGCATTGTATGATTGTTTCCTTTTACAAGTTTGTTGAATCCCCCGCGGATAAGCGGACCAAAAATTGAGGTCA > W3110S.gb/1311207‑1311334 | gATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAATGATCTTTACGATGCATTGTATGattgt > 1:268503‑M2/1‑66 (MQ=255) tCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAATGATCTTTACGATGCATTGTATGattgt > 1:743209‑M2/1‑64 (MQ=255) tATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAATGATCTTTACGATGCATTGTATGATTGTTTCCt < 1:824461/71‑1 (MQ=255) ttGATGGCGAGAATCGAATGTCCGCAAACAATAAAATGATCTTTACGATGCATTGTATGATTGTTTCCttt > 1:7589/1‑71 (MQ=255) aTGGCGAGAATCGAATGTCCGCAAACAATAAAATGATCTTTACGATGCATTGTATg < 1:941982/56‑1 (MQ=255) gagaATCGAATGTCCGCAAACAATAAAATGATCTTTACGATGCATTGTATGATTGTTTCCTTTTACAAGtt < 1:687219/71‑1 (MQ=255) aTCGAATGTCCGCAAACAATAAAATGATCTTTACGATGCATTGTATGATTGTTTCCTTTTACAAGTttgtt < 1:587701/71‑1 (MQ=255) gAATGTCCGCAAACAATAAAATGATCTTTACGATGCATTGTATGATTGTTTCCTTTTACAAGTTTGTTGaa > 1:208265/1‑71 (MQ=255) aaaCAATAAAATGATCTTTACGATGCATTGTATGattgtttgcggacattcgattctcgccatcaatacga < 1:1929197‑M2/71‑38 (MQ=255) aaaCAATAAAATGATCTTTACGATGCATTGTATGATTGTTTCCTTTTACAAGTTTGTTGAATCCCCcgcg > 1:520373/1‑70 (MQ=255) aaCAATAAAATGATCTTTACGATGCATTGTATGattgt < 1:800324‑M2/38‑6 (MQ=255) aaCAATAAAATGATCTTTACGATGCATTGTATGATTGTTTCCtt < 1:1605056/44‑1 (MQ=255) tAAAATGATCTTTACGATGCATTCTATGATTGTTTCCTTTTACAAGTTTGTTGAATCCCCCGCGGATAAGc < 1:610658/71‑1 (MQ=255) aaTGATCTTTACGATGCATTGTATGATTGTTTCCTTTTACAAGTttg < 1:722668/47‑1 (MQ=255) tCTTTACGATGCATTGTATGattgtttgcggacattc > 1:1962851‑M2/1‑20 (MQ=255) cTTTACGATGCATTGTATGATTGTTTCCTTTTACAAGTTTGTTGAATCCCCCGCGGATAAGCGGACCaaa > 1:395892/1‑70 (MQ=255) ttACGATGCATTGTATGATTGTTTCCTTTTACAAGTTTGTTGAATCCCCCGCGGATAAGCGGACCAAAAAt > 1:1846061/1‑71 (MQ=255) tACGATGCATTGTATGattgtttgcggacattcgattctcgccatc < 1:1932550‑M2/46‑31 (MQ=255) tACGATGCATTGTATGATTGTTTCCTTTTACAAGTttg > 1:389901/1‑38 (MQ=255) tACGATGCATTGTATGATAGTTTCCTTTTACAAGTttgttg > 1:973633/1‑41 (MQ=255) tACGATGCATTGTATAATTGTTTCCTTTTACAAGTTTGTTGAATCCCCCGCGGATAAGCGGACCaa < 1:796901/66‑1 (MQ=255) aCGATGCATTGTATGATTGTTTCCTTTTACAAGTTTGTTGAATCCCCCGCGGATAAGCGGACCAAAAAtt < 1:985258/70‑1 (MQ=255) gTATGATTGTTTCCTTTTACAAGTTTGTTGAATCCCCCGCGGATAAGCGGACCAAAAAt > 1:905940/1‑59 (MQ=255) gTATGATTGTTTCCTTTTACAAGTTTGTTGAATCCCCCGCGGATAAGCGGACCAAAAATTGAGGTCa > 1:2597/1‑67 (MQ=255) tGATTGTTTCCTTTTACAAGTTTGTTGAATCCCCCGCGGATAAGCGGACCaaa < 1:689669/53‑1 (MQ=255) | GATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAATGATCTTTACGATGCATTGTATGATTGTTTCCTTTTACAAGTTTGTTGAATCCCCCGCGGATAAGCGGACCAAAAATTGAGGTCA > W3110S.gb/1311207‑1311334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |