| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 15743 = | NA (NA) | 4 (0.050) | 4/90 | NT | NA | coding (299/1113 nt) | insL | IS186/IS421 transposase |
| ? | W3110S.gb | 15768 = | NA (NA) | coding (324/1113 nt) | insL | IS186/IS421 transposase | |||||
GCCCCCGGGCGCACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/15816‑15743‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGGCGGCAGCGCTGAATGGCGACTA > W3110S.gb/15768‑15837 GCCCCCGGGCGCACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTG > 1:2173358/1‑71GCCCCCGGGCGCACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTG > 1:5501232/1‑71GCCCCCGGGCGCACTGATTGCTGTTCCATCGACAAGACGCAATCTCTGTCCGCTTGTACAACCCGTAACTG > 1:3975340/1‑71 CCCCCGGGCGCACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGC > 1:7188639/1‑71 CCCCCGGGCGCACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGC > 1:4173441/1‑71 CCCCCGGGCGCACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGC < 1:3950648/71‑1 CCCCCGGGCGCACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGC < 1:290475/71‑1 CCCCGGGCGCACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGCG > 1:1784349/1‑71 CCCCGGGCGCACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGCG > 1:1958840/1‑71 CCCCGGGCGCACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGCG > 1:2777958/1‑71 CCCCGGGCGCACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGATTGTACAACCCGTAACTGCG < 1:7509239/71‑1 CCCGGGCGCACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGCGG > 1:5518032/1‑71 CCCGGGCGCACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGCGG < 1:4530266/71‑1 CCCGGGCGCACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGCG < 1:941230/70‑1 ACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGC < 1:6827077/60‑1 ACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTG < 1:6204727/59‑1 ACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTG < 1:4837416/59‑1 CTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGCG < 1:2803361/60‑1 CTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGCG < 1:2783886/60‑1 TGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGC > 1:6190451/1‑54 TTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGCG < 1:4618127/50‑1 TCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGCG < 1:6658672/45‑1 TCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTG < 1:3916233/43‑1 TCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTG < 1:7588469/43‑1 TCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTG < 1:5559193/43‑1 CGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGCG < 1:3539270/44‑1 GACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGCG > 1:2020448/1‑43 ACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTG < 1:8333/40‑1 ACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTG < 1:6846224/40‑1 ACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTG < 1:5571668/40‑1 CAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTG < 1:3376656/39‑1 AAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGCG > 1:5344501/1‑40 AAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGCG < 1:855463/40‑1 TTCCGCTTGTACAACCCGTAACTGCGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATC < 1:2616347/61‑1 TCCGCTTGTACAACCCGTAACTGCGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGC > 1:266861/1‑65 CCGCTTGTACAACCCGTAACTGCGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCA > 1:1319507/1‑60 GTAACTGCGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGGCGGCAGCGCTGAA < 1:587275/71‑1 GCGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGG < 1:2175008/52‑1 GCGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGG < 1:4662922/52‑1 GCGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGT < 1:1773610/41‑1 CGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGGCGGCAGCGCTGAATG < 1:3124785/66‑1 CGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATC < 1:3034441/37‑1 GGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGTGGGCGGCAGCGCTGAATGGCGACT < 1:3454655/71‑1 GGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGGCGGCAGCGCTGAATGGC < 1:6979476/67‑1 GGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGGCGGCAGCGCTGAATGGC < 1:7563669/67‑1 GGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGGCGGCAGCGCTG < 1:708359/61‑1 GGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGGCGGCAGCGCTG < 1:2301522/61‑1 GGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGG > 1:3762812/1‑50 GAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGGCGGCAGCGCTGAATGGCGACTA < 1:1198016/71‑1 GCCCCCGGGCGCACTGATTGCTGTTCCATCGACAAGACGCAATCTCTTTCCGCTTGTACAACCCGTAACTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/15816‑15743‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGGCGGCAGCGCTGAATGGCGACTA > W3110S.gb/15768‑15837 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |