| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 314818 = | NA (NA) | 9 (0.120) | 5/90 | NT | NA | coding (8/867 nt) | insF | IS3 element protein InsF |
| ? | W3110S.gb | 314838 = | NA (NA) | coding (28/867 nt) | insF | IS3 element protein InsF | |||||
Only 100 of 126 total aligned reads displayed.
GCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/314891‑314818‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acatCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGT > W3110S.gb/314838‑314907 GCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGA > 1:162870/1‑71GCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGA > 1:2744231/1‑71GCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGA > 1:1839284/1‑71GCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGA < 1:7664788/71‑1GCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGA > 1:5041762/1‑71 CTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGAC < 1:5770599/71‑1 CTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGA > 1:7362261/1‑70 TGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:5075373/1‑71 TGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:4700196/1‑71 TGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:3308704/1‑71 GCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:5331600/1‑70 GCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA < 1:6668330/70‑1 GCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:4008226/1‑70 GCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:3643811/1‑70 GCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:7055205/1‑70 GCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGAC > 1:5598054/1‑69 GCGGGCCACCCGGAGCACGCGGCACATTGCTTTGACGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:7307336/1‑70 CGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACAT < 1:7920306/70‑1 CGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA < 1:5721299/69‑1 CGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA < 1:859335/69‑1 CGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA < 1:5794719/69‑1 ACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGAC < 1:6995495/62‑1 CCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGA > 1:4185820/1‑59 CCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGA < 1:6057280/59‑1 GGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACAT > 1:2374064/1‑60 GGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:295670/1‑59 CACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGA < 1:6409492/53‑1 CGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:1670563/1‑53 CGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:2185569/1‑53 GCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGAC < 1:6894092/51‑1 GCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGA < 1:7113673/50‑1 CGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGAC > 1:6819742/1‑50 CGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGAC > 1:3554946/1‑50 CGGCACATTGCTTTGATGATGAACTCAGCCTGATGTTTTTCAATAAAGAC < 1:2909049/50‑1 GGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:1210610/1‑50 GGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGAC < 1:3719860/49‑1 tCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACAT < 1:626287/49‑1 CACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACAT < 1:7765926/49‑1 ACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:7272747/1‑47 ACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:347505/1‑47 ATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGAC < 1:2366782/44‑1 ATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGAC < 1:3319145/44‑1 ATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGAC < 1:1289887/44‑1 ATTGCTTTGACGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA < 1:4174897/45‑1 TGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:373491/1‑43 TGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:7709415/1‑43 TGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:2524769/1‑43 TGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGAC > 1:4327900/1‑42 TGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGAC > 1:4615128/1‑42 CTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACA > 1:7215061/1‑41 CTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGAC < 1:645745/40‑1 CTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGAC < 1:5488260/40‑1 TGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGAC > 1:5553554/1‑37 GCTGAACTCATCCTTATGTTTTTCAATAAAGACAT < 1:2289754/35‑1 ATGTTTTTCAATAAAGACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCG > 1:2739871/1‑70 ATGTTTTTCAATAAAGACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCG > 1:7312189/1‑70 ATGTTTTTCAATAAAGACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCG > 1:7782090/1‑70 ATGTTTTTCAATAAAGACATCAGGCTGAGTTCAGCATCAAAGC < 1:1586512/43‑1 ATGTTTTTCAATAAAGACATCAGGCTGAGTTCAGCATAAAAGCAATGTGCCGCTTGCTCC > 1:1339162/1‑60 TGTTTTTCAATAAAGACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCA < 1:5915092/71‑1 TGTATTTCAATAAAGACATCAGGCTGAGTTCAGCATCAAAGCAAT > 1:2315867/1‑45 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGT < 1:2163904/71‑1 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGT < 1:1143958/71‑1 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGT < 1:6227373/71‑1 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGT > 1:6855884/1‑71 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGT < 1:4054292/71‑1 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGT > 1:6846496/1‑71 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGT < 1:4844446/71‑1 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGT < 1:2342927/71‑1 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGT > 1:4436043/1‑71 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTA > 1:1112592/1‑66 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGC > 1:3255677/1‑61 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCA > 1:6025077/1‑56 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCA > 1:3151031/1‑56 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGT > 1:185183/1‑48 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGG > 1:1104573/1‑47 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGG > 1:1122442/1‑47 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCC > 1:884565/1‑44 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCC > 1:289659/1‑44 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCC > 1:5604268/1‑44 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTG > 1:5445315/1‑40 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCG < 1:6490207/38‑1 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCG < 1:1328061/38‑1 ACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCG < 1:1813842/38‑1 ACATCAGGCTGAGTTCAGCATCAAAGAAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGT < 1:6452884/71‑1 CATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTG < 1:4972757/71‑1 CATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTG < 1:2782166/71‑1 CATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTG > 1:3805098/1‑62 ATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCt > 1:6054572/1‑35 ATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCt > 1:1781782/1‑35 ATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGG > 1:6260564/1‑71 ATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGG > 1:2041326/1‑58 ATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGG > 1:5274990/1‑58 ATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGC < 1:4480998/49‑1 TCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGT > 1:5436539/1‑71 TCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGT < 1:1471592/71‑1 TCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGT > 1:4910769/1‑71 TCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGC < 1:3410400/58‑1 TCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGC < 1:3420024/58‑1 TCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCC < 1:5529583/41‑1 GCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/314891‑314818‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acatCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGT > W3110S.gb/314838‑314907 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |