| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 381461 = | NA (NA) | 9 (0.130) | 6/86 | NT | NA | coding (564/906 nt) | insD | IS2 insertion element transposase InsAB' |
| ? | W3110S.gb | 381491 = | NA (NA) | coding (594/906 nt) | insD | IS2 insertion element transposase InsAB' | |||||
Only 100 of 168 total aligned reads displayed.
CGGGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/381535‑381461‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacggaTAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAAC > W3110S.gb/381491‑381560 CGGGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATTAACCATTATCCGTCAGCCACTCCACTGGAGACG < 1:5068322/70‑1CGGGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGA > 1:7161906/1‑71CGGGCGAACTGGCGTGTTTCATTAGCCCGGTAGAATGAACCATTATCCGTCAGCCACTCCACTGGAGACGA < 1:3122604/71‑1CGGGCGAACTGGAGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGA < 1:2453081/71‑1 GGGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGA < 1:27376/70‑1 GGCGAACTGGCGTGTTTCATTTGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACG > 1:2168726/1‑71 GGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACG < 1:4091457/71‑1 GGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACG < 1:4736171/71‑1 GCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG < 1:7620772/71‑1 GCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG < 1:4334391/71‑1 GCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG < 1:4653860/71‑1 GCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG < 1:493845/71‑1 GCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACG > 1:724106/1‑70 CGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGGA < 1:6448542/71‑1 GAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACG < 1:6752377/68‑1 AACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCCGCCACTCCACTGGAGACGAC > 1:2594001/1‑66 AACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:3789406/1‑68 AACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:4965535/1‑68 AACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACG > 1:6650845/1‑67 AACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGAC > 1:181467/1‑66 ACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:6440152/1‑67 ACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:354255/1‑67 ACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:690225/1‑67 CTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:4558368/1‑66 CTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:4927760/1‑66 CTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:208691/1‑66 CTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACG > 1:4257202/1‑65 TGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:4389506/1‑65 GCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGA > 1:3040453/1‑60 TTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGG > 1:6671064/1‑58 TCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGA > 1:3503615/1‑53 TCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACG > 1:853741/1‑52 TTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGGA > 1:5909815/1‑54 GCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGA > 1:7021001/1‑47 CCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGGA < 1:2176728/50‑1 TAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGA > 1:3641113/1‑41 TGAACCATTATCCGTCAGCCACTCCACTGGAGACGAC > 1:512058/1‑37 ACCATTATCCGTCAGCCACTCCACTGGAGACGACGG < 1:7679971/36‑1 ACCATTAACCGTCAGCCACTCCACTGGAGACGACGG < 1:7831818/36‑1 TTATCCGTCAGCCACTCCACTGGAGACGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGT > 1:5252198/1‑71 ATCCGTCAGCCACTCCACTGGAGACGACGGATAATGGTTCATGCTACCGGGCTAAT > 1:605543/1‑56 AGCCACTCCACTGGAGACGACGGATAATGGTTCATCCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGA > 1:4327015/1‑71 CTGGAGACGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCG > 1:636877/1‑55 GACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCATTTCGCCCGGATGTTGGGACTTGAAC < 1:4943717/68‑1 GACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:3922315/1‑70 GACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:3183992/1‑70 GACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGG > 1:6835176/1‑59 GACGGATAATGGTTCATGCTACCGGGCTAATGAAAC > 1:2563167/1‑36 GACGGATAATGGTTCATGATACCGGGCTAATGAAACACGCCAG < 1:1943289/43‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAA < 1:6633194/71‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGA < 1:2805906/70‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:6009053/1‑69 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:562155/1‑69 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:5258434/1‑69 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG < 1:353753/69‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:1547487/1‑69 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:1203304/1‑69 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG < 1:3522151/69‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:4990535/1‑69 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:4781328/1‑69 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG < 1:2765882/69‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACT < 1:4111977/62‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGG < 1:5178100/58‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGG < 1:1846144/58‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGG < 1:1344968/58‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTG > 1:5537668/1‑57 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGG < 1:7345740/51‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGG < 1:4513898/51‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCC < 1:6241291/49‑1 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCG > 1:3962953/1‑46 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAG > 1:4866803/1‑42 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAG > 1:2962277/1‑42 ACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAG > 1:7474627/1‑42 cgtATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAG < 1:1440719/68‑1 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAG < 1:7406771/71‑1 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAA < 1:5515736/70‑1 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:2890654/1‑68 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG < 1:1166092/68‑1 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG > 1:5403817/1‑68 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACC > 1:1616506/1‑67 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGT < 1:6373394/54‑1 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTT > 1:6619754/1‑43 CGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTT > 1:6113224/1‑43 GGATAATGGTTCATGCTACCTGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGA < 1:6031279/71‑1 GGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTT > 1:1068639/1‑61 GGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGG > 1:3278196/1‑57 GGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGT > 1:1358238/1‑53 tATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAA < 1:3639112/70‑1 GATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAA > 1:684939/1‑71 GATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAA < 1:7311189/71‑1 GATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAA > 1:512470/1‑71 GATAATGGTTCATGCTACCGGGCTAATGAAACACGCCA < 1:5034207/38‑1 GATAATGGTTCATGCTACCGGGCTAATGAAACACGC < 1:721120/36‑1 GATAATGGTTCATGCTACCGGGCTAATGAAACACGC < 1:6792269/36‑1 GATAATGGTTCATGCTACCGGGCTAATGAAACACGC < 1:7703271/36‑1 GATAATGGTTCATGCTACCGGGCTAATGAAACACGC < 1:3705804/36‑1 ATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAA > 1:7344699/1‑70 ATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCG < 1:2325244/65‑1 ATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACT < 1:7461013/58‑1 ATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGC < 1:7025724/43‑1 CGGGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/381535‑381461‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacggaTAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAAC > W3110S.gb/381491‑381560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |