| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 870129 | 43 (0.530) | 3 (0.040) | 3/88 | NT | 7.5% | coding (297/1539 nt) | yliB | predicted peptide transporter subunit |
| ? | W3110S.gb | = 870168 | 35 (0.480) | coding (336/1539 nt) | yliB | predicted peptide transporter subunit | |||||
CTGGCGGAGAGTTATACCGTTTCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATTCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/870055‑870129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccagATTCGCTTTCACCGCCGCGGCGTTGAAATCGGTGCCATCCTGGAATTTAATGCCTTCCCGCAATTT < W3110S.gb/870168‑870103 CTGGCGGAGAGTTATACCGTTTCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATT < 1:5367853/71‑1 TGGCGGAGAGTTATACCGTTTCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATTC > 1:953649/1‑71 GCGGAGAGTTATACCGTTTCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATTCC < 1:2709512/70‑1 GCGGAGAGTTATACCGTTTCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATTCC < 1:6157956/70‑1 GCGGAGAGTTATACCGTTTCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATTCC < 1:7823665/70‑1 GCGGAGAGTTATACCGTTTCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATTC < 1:3756478/69‑1 GCGGAGAGTTATACCGTTTCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATTC < 1:4498654/69‑1 taATACCGTTTCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATTC < 1:1525379/59‑1 TACCGTTTCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATTCCAG > 1:3448047/1‑61 TTCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATTC > 1:723573/1‑52 TCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATT > 1:7730435/1‑50 TCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATT > 1:7849334/1‑50 TGCGGGAAGGCATTAAATTCCAGATTCGCTTTCACCGCCGCGGCGTTGAA < 1:2211666/50‑1 CGGGAAGGCATTAAATTCCAGATTCGCTTTCACCGCCGCGGCGTTGAAAT > 1:1437496/1‑50 GAAGGCATTAAATTCCAGATTCGCTTTCACCGCCGCGGCG < 1:4962796/40‑1 CCAGATTCGCTTTCACCGCCGCGGCGTTGAAATCGGTGCCATCCTGGAATTTAATGCCTTCCCGCAATTT > 1:912139/1‑70 CTGGCGGAGAGTTATACCGTTTCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATTCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/870055‑870129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccagATTCGCTTTCACCGCCGCGGCGTTGAAATCGGTGCCATCCTGGAATTTAATGCCTTCCCGCAATTT < W3110S.gb/870168‑870103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |