| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1501007 | 49 (0.600) | 8 (0.110) | 3/90 | NT | 13.1% | coding (356/540 nt) | rimL | ribosomal‑protein‑L7/L12‑serine acetyltransferase |
| ? | W3110S.gb | = 1501025 | 61 (0.820) | coding (374/540 nt) | rimL | ribosomal‑protein‑L7/L12‑serine acetyltransferase | |||||
GAAATAGGCTACTGGCTGGACGAATCTCATCAGGGGCAGGGGATCATTTCTCAGGCGCTGCAGGCATTGATTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/1500934‑1501007‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcaCCAGACTGGGCGTAATGATGAATCAATGCCTGCAGCGCCTGAGAAATGATCCCCTGCCCCTGAT < W3110S.gb/1501025‑1500962 GAAATAGGCTACTGGCTGGACGAATCTCATCAGGGGCAGGGGATCATTTCTCAGGCGCTGCAGGCATTGAT > 1:3290486/1‑71 AAATAGGCTACTGGCTGGACGAATCTCATCAGGGGCAGGGGATCATTTCTCAGGCGCTGCAGGCATTGAT < 1:5872247/70‑1 ATAGGCTACTGGCTGGACGAATCTCATCAGGGGCAGGGGATCATTTCTCAGGCGCTGCAGGCATTGATTC > 1:2177231/1‑70 GGACGAATCTCATCAGGGGCAGGGGATCATTTCTCAGGCGCTGCAGGCATTGATT > 1:5119534/1‑55 CGCTGCAGGCATTGATTCACCAGACTGGGCGTAATGATGAA > 1:5989644/1‑41 CGCTGCAGGCATTGATTCACCAGACTGGGCGTAATGATGAA > 1:2544667/1‑41 CGCTGCAGGCATTGATTCACCAGACTGGGCGTAATGATGAA > 1:3729405/1‑41 GCTGCAGGCATTGATTCACCAGACTGGGCGTAATGAT < 1:3293858/37‑1 GCTGCAGGCATTGATTCACCAGACTGGGCGTAATGAT < 1:98284/37‑1 GCTGCAGGCATTGATTCACCAGACTGGGCGTAATGAT < 1:163410/37‑1 GCTGCAGGCATTGATTCACCAGACTGGGCGTAATGAT < 1:996766/37‑1 TGCAGGCATTGATTCACCAGACTGGGCGTAATGATGA > 1:2061586/1‑37 TTCACCAGACTGGGCGTAATGATGAATCAATGCCTGCAGCGCCTGAGAAATGATCACCTGCCCCTGAT > 1:3103347/1‑68 TTCACCAGACTGGGCGTAATGATGAATCAATGCCTG < 1:5198392/36‑1 TTCACCAGACTGGGCGTAATGATGAATCAATGCCTG < 1:995614/36‑1 TTCACCAGACTGGGCGTAATGATGAATCAATGCCTG < 1:7485162/36‑1 TTCACCAGACTGGGCGTAATGATGAATCAATGCCTG < 1:6933064/36‑1 TCACCAGACTGGGCGTAATGATGAATCAATGCCTGCAGCGCCT < 1:5807573/43‑1 TCACCAGACTGGGCGAAATGATGAATCAATGCCTGCAGCGCCT < 1:7865119/43‑1 CACCAGACTGGGCGTAATGATGAATCAATGCCTGCA > 1:7394694/1‑36 CACCAGACTGGGCGTAATGATGAATCAATGCCTGCA > 1:1494345/1‑36 ACCAGACTGGGCGTAATGATGAATCAATGCCTGCAGCGCCTGAGAAATGATC < 1:4257488/52‑1 ACCAGACTGGGCGTAATGATGAATCAATGCCTGCAGCGCCTGA > 1:6356394/1‑43 ACCAGACTGGGCGTAATGATGAATCAATGCCTGCAGCGCCTGA > 1:1102165/1‑43 ACCAGACTGGGCGTAATGATGAATCAATGCCTGCAGCGCCTGA > 1:7654134/1‑43 ACCAGACTGGGCGTAATGATGAATCAATGCCTGCAGCGCCTGA > 1:4931605/1‑43 GAAATAGGCTACTGGCTGGACGAATCTCATCAGGGGCAGGGGATCATTTCTCAGGCGCTGCAGGCATTGATTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/1500934‑1501007‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcaCCAGACTGGGCGTAATGATGAATCAATGCCTGCAGCGCCTGAGAAATGATCCCCTGCCCCTGAT < W3110S.gb/1501025‑1500962 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |