New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | W3110S.gb | 1614648 = | 84 (1.030) | 6 (0.080) | 3/94 | NT | 6.6% | coding (318/927 nt) | yneH | predicted glutaminase |
? | W3110S.gb | 1614673 = | 90 (1.150) | coding (293/927 nt) | yneH | predicted glutaminase |
GGAAATCTGGCAACGCGTCGGCAAAGATCCGTCTGGATCACCGTTCAATTCCTTAGTGCAACTGGAAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/1614717‑1614648 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgAACGGTGATCCAGACGGATCTTTGCCGACGCGTTGCCAGATTTCCTCTT > W3110S.gb/1614673‑1614721 GGAAATCTGGCAACGCGTCGGCAAAGATCCGTCTGGATCACCGTTCAATTCCTTAGTGCAACTGGAAATG > 1:223580/1‑70 CAACGCGTCGGCAAAGATCCGTCTGGATCACCGTTCAATTCCTTAGTGCAACTGGAAATG < 1:4712457/60‑1 CGCGTCGGCAAAGATCCGTCTGGATCACCGTTCAATTCCTTAGTGCAACTGGAAAT > 1:1391618/1‑56 TTCAATTCCTTAGTGCAACTGGAAATGAACGGTGATCCAGACGGATCTTTGCCGACGCGTTGCCAGAT < 1:3886219/68‑1 CAATTCCTTAGTGCAACTGGAAATGAACGGTGATCCAGACGGATCTTTGCCGACGCGTTGCCGGATTTCCT > 1:3635261/1‑71 CAATTCCTTAGTGCAACTGGAAATGAACGGTGATCCAGACGGATCTTTGCCGACGCGTTGCCAGATTTCCT > 1:2265011/1‑71 TTCCTTAGTGCAACTGGAAATGAACGGTGATCCAGACGGATCTTTGCCGACGCGTTGCCAGATTTCCTCTT < 1:2866975/71‑1 TTCCTTAGTGCAACTGGAAATGAACGGTGATCCAGACGGATCTTTGCCGACGCGTTGCCAGATTTCCTCTT < 1:5079217/71‑1 TTCCTTAGTGCAACTGGAAATGAACGGTGATCCAGACGGATCTTTGCCGACGCGTTGCCAGATTTCCTCTT < 1:5088198/71‑1 GAACGGTGATCCAGACGGATCTTTGCCGACGCGTTGCCAGATTTC > 1:5616462/1‑45 GAACGGTGATCCAGACGGATCTTTGCCGACGCGTTGCCAGATTTC > 1:7913269/1‑45 GGAAATCTGGCAACGCGTCGGCAAAGATCCGTCTGGATCACCGTTCAATTCCTTAGTGCAACTGGAAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/1614717‑1614648 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgAACGGTGATCCAGACGGATCTTTGCCGACGCGTTGCCAGATTTCCTCTT > W3110S.gb/1614673‑1614721 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |