New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? W3110S.gb = 243380941 (0.500)4 (0.050) 3/88 NT 7.9% coding (264/570 nt) ubiX 3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase
?W3110S.gb = 2433820 57 (0.780)coding (253/570 nt) ubiX 3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase

TCAGCACCACATCTGCCGCACGGGTCAGTAAGCCATCAGTATAGCTATGGACAATGCCGGAAAGGGTTTTGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/2433736‑2433809
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgattTTACCCTGTTCAATCAAAACCCTTTCCGGCATTGTCCATAGCTATACTGATGGCTTACTGACCCGTGC  <  W3110S.gb/2433820‑2433753
                                                                                                                                              
TCAGCACCACATCTGCCGCACGGGTCAGTAAGCCATCAGTATAGCTATGGACAATGCCGGAAAGGGTTTT                                                                          <  1:5041775/70‑1
TCAGCACCACATCTGCCGCACGGGTCAGTAAGCCATCAGTATAGCTATGGACAATGCCGGAAAGGGTTTT                                                                          <  1:1164340/70‑1
TCAGCACCACATCTGCCGCACGGGTCAGTAAGCCATCAGTATAGCTATGGACAATGCCGGAAAGGGTTTT                                                                          >  1:2231335/1‑70
 CAGCACCACATCTGCCGCACGGGTCAGTAAGCCATCAGTATAGCTATGGACAATGCCGGAAAGGGTTTT                                                                          <  1:6764892/69‑1
  AGCACCACATCTGCCGCACGGGTCAGTAAGCCATCAGTATAGCTATGGACAATGCCGGAAAGGGTTTTGAT                                                                       >  1:3471443/1‑71
   GCACCACATCTGCCGCACGGGTCAGTAAGCCATCAGTATAGCTATGTACAATGCCGGAAAGGGTTTTGATT                                                                      <  1:2720320/71‑1
   GCACCACATCTGCCGCACGGGTCAGTAAGCCATCAGTATAGCTATGGACAATGCCGGAAAGGGTTTTGA                                                                        <  1:2644680/69‑1
                       GTCAGTAAGCCATCAGTATAGCTATGGACAATGCCGGAAAGGGTTTT                                                                          <  1:1455633/47‑1
                        TCAGTAAGCCATCAGTATAGCTATGGACAATGCCGGAAAGGGTTTTGAT                                                                       <  1:3763529/49‑1
                           GTAAGGCATCAGTATAGCTATGGACAATGCCGGAAAGGGTTTTGATTTTACCCTGTTCAATCAAAA                                                   >  1:4100446/1‑66
                           GTAAGCCATCAGTATAGCTATGGACAATGCCGGAAAGGGTTTTGATTTTACCCTGTTCAATCAAAA                                                   >  1:5636429/1‑66
                                CCATCAGTATAGCTATGGACAATGCCGGAAAGGGTTTTGA                                                                        <  1:2746866/40‑1
                                CCATCAGTATAGCTATGGACAATGCCGGAAAGGGTTTTGA                                                                        <  1:3334229/40‑1
                                 CATCAGTATAGCTATGGACAATGCCGGAAAGGGTTTTGATTTTACCCTGTTCAATCAAAA                                                   >  1:2035242/1‑60
                                    CAGTATAGCTATGGACAATGCCGGAAAGGGTTTTGAT                                                                       >  1:6218937/1‑37
                                       TATAGCTATGGACAATGCCGGAAAGGGTTTTGATTTTACCCTGTTC                                                           <  1:4128583/46‑1
                                                                     TGATTTTACCCTGTTCAATCAAAACCCTTTCCGGCATTGTCCATAGCTATACTGA                    >  1:5591410/1‑55
                                                                     TGATTTTACCCTGTTCAATCAAAACCCTTTCCGGCATTGTCCATAGCTATACT                      <  1:3553285/53‑1
                                                                      GATTTTACCCTGTTCAATCAAAACCCTTTCCGGCATTGTCCATAGCTATACTGA                    >  1:5857697/1‑54
                                                                       ATTTTACCCTGTTCAATCAAAACCCTTTCCGGCATTGTCCATAGCTATACTGATGGCTTACTGACCCGTGC  <  1:4007938/71‑1
                                                                       ATTTTACCCTGTTCAATCAAAACCCTTTCCGGCATTGTCCATAGCTATACTGATGGCTTACTGACCCGTGC  <  1:1879348/71‑1
                                                                       ATTTTACCCTGTTCAATCAAAACCCTTTCCGGCATTGTCCATAGCTATACTGATGGCTTACTGACCCGTGC  <  1:1538156/71‑1
                                                                       ATTTTACCCTGTTCAATCAAAACCCTTTCCGGCATTGTC                                  <  1:3259524/39‑1
                                                                        TTTTACCCTGTTCAATCAAAACCCTTTCCGGCATTGTCCATAGCTATACT                      <  1:7287448/50‑1
                                                                                                                                              
TCAGCACCACATCTGCCGCACGGGTCAGTAAGCCATCAGTATAGCTATGGACAATGCCGGAAAGGGTTTTGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/2433736‑2433809
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgattTTACCCTGTTCAATCAAAACCCTTTCCGGCATTGTCCATAGCTATACTGATGGCTTACTGACCCGTGC  <  W3110S.gb/2433820‑2433753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.