New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | W3110S.gb | = 2728810 | NA (NA) | 13 (0.170) | 3/92 | NT | NA | noncoding (1004/1542 nt) | rrsG | 16S ribosomal RNA |
? | W3110S.gb | = 2728831 | NA (NA) | noncoding (983/1542 nt) | rrsG | 16S ribosomal RNA |
AACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/2728738‑2728810 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCT < W3110S.gb/2728831‑2728762 AACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:3752120/1‑71 AACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:7568220/1‑71 AACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:1624457/1‑71 AACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:1721708/1‑71 AACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC < 1:611663/71‑1 AACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC < 1:2711369/71‑1 AACACGACCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:409758/1‑71 ACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACT < 1:2777308/71‑1 ACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACT > 1:6814808/1‑71 ACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACT < 1:624930/71‑1 ACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACT > 1:5294418/1‑71 ACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACT > 1:4699208/1‑71 ACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACT > 1:4690149/1‑71 ACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACT < 1:2379872/71‑1 ACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:7926659/1‑70 ACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC < 1:5111760/70‑1 CACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACTT > 1:2363442/1‑71 CACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACTT > 1:4578692/1‑71 CACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACTT > 1:4268302/1‑71 CACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACTT < 1:2688965/71‑1 CACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACTT > 1:5782185/1‑71 CACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACTT > 1:3814416/1‑71 CACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACTT > 1:7262592/1‑71 CACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACT > 1:4661393/1‑70 CACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTATGAAAACTT > 1:3078709/1‑71 GCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACTT > 1:934135/1‑66 TGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACT < 1:7602108/63‑1 GACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:2260079/1‑61 ACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:471457/1‑60 ACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:4627141/1‑60 ACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATACTCATCTCTGAAAAC > 1:557390/1‑60 GACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:775065/1‑58 AGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:5623056/1‑55 AGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:405604/1‑55 TGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACT < 1:5649610/51‑1 TGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACT < 1:5456580/51‑1 TGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACT < 1:4987580/51‑1 TGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACT < 1:2115318/51‑1 GCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACT < 1:5765199/50‑1 GCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACT < 1:2982723/47‑1 ACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACTTAC > 1:664784/1‑48 CCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:927573/1‑43 CCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:2711571/1‑43 CCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:6041090/1‑43 attTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACTTACCTGGTCTTGACATCCACGGAAGTTT < 1:5321525/68‑1 attTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACTTACCTGGTCTTGACATCCACGGAAGTTT < 1:5312537/68‑1 CTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACTTACCTGGTCTTGACATCCACGGAAGTTT < 1:6483889/71‑1 CTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACTTACCTGGTCTTGACATCCACGGAAGTTT < 1:1994981/71‑1 TGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:4163130/1‑41 GTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:4704171/1‑40 GTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAAC > 1:7760973/1‑40 TCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACTTACCTGGTCTTGACATCCACGGAAGTTT < 1:5864992/66‑1 TCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACT < 1:7157810/38‑1 CCCGAAGGCACATTCTCATCTCTGAAAACTTACCTGGTCTTGACATCCACGTAAGTTTT > 1:1947290/1‑59 CCCGAAGGCACATTCTCATCTCTGAAAACTTACCTGGTCTTGACATCCACGTAAGTTTT > 1:1956521/1‑59 CCCGAAGGCACATTCTCATCTCTGAAAACTTACCTGGTCTTGACATCCACGGAAGTTTT > 1:3825628/1‑59 GAAGGCACATTCTCATCTCTGAAAACTTACCTGGTCTTGACATCCACGG < 1:6746457/49‑1 GAAGGCACATTCTCATCTCTGAAAACTTACCTGGTCTTGACATCCACGG < 1:7723355/49‑1 GAAGGCACATTCTCATCTCTGAAAACTTACCTGGTCTTGACATCCACGG < 1:2422855/49‑1 GAAGGCACATTCTCATCTCTGAAAACTTACCTGGTCTTGACATCCACGG < 1:2413365/49‑1 GAAGGCACATTCTCATCTCTGAAAACTTACCTGGTCTTGACATCCACGG < 1:4187018/49‑1 CTTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTTGGGAACCGTGAGACAGGTG < 1:4561066/71‑1 CTTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTG < 1:1359712/71‑1 CTTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTG < 1:3839107/71‑1 CTTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGG < 1:155553/69‑1 CTTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGG < 1:2843123/69‑1 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGC > 1:539786/1‑71 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGC > 1:2385108/1‑71 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGC > 1:6593261/1‑71 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGC > 1:1620293/1‑71 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGC > 1:762026/1‑71 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGC > 1:5979076/1‑71 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGC > 1:5087331/1‑71 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGC > 1:3441844/1‑71 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGC > 1:1058725/1‑71 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTG > 1:750276/1‑70 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGG < 1:2861068/68‑1 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAAC < 1:723782/57‑1 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAG < 1:6593142/40‑1 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGA > 1:3039655/1‑36 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGA < 1:7428789/36‑1 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGA < 1:5294875/36‑1 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGA < 1:1815641/36‑1 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGA < 1:553361/36‑1 TTACCTGGTCTTGACATCCACGGAAGTTTTCAGAG > 1:3376865/1‑35 TACCTGGTCTTGACATCCAGGGAAGTTTTCAGAGATGAGAATGTGCCTTC > 1:1345963/1‑50 TACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCT > 1:7266240/1‑71 TACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCT > 1:5202878/1‑71 TACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCT > 1:4325066/1‑71 TACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCT > 1:282315/1‑71 TACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAAC > 1:4121211/1‑56 TACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTC > 1:6378320/1‑50 TACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCATCGGGA > 1:2690181/1‑54 TACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTACCTTCGGGAACCGTGAGACAGGTGCT > 1:1411215/1‑71 TACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATG < 1:6448371/43‑1 AACACGAGCTGACGACAGCCATGCAGCACCTGTCTCACGGTTCCCGAAGGCACATTCTCATCTCTGAAAACTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/2728738‑2728810 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGGAACCGTGAGACAGGTGCT < W3110S.gb/2728831‑2728762 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |