| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2931388 = | 62 (0.760) | 6 (0.090) | 3/84 | NT | 11.2% | coding (285/1152 nt) | fucO | L‑1,2‑propanediol oxidoreductase |
| ? | W3110S.gb | 2931418 = | 42 (0.600) | coding (255/1152 nt) | fucO | L‑1,2‑propanediol oxidoreductase | |||||
CCAACCCAACAATTACTGTCGTCAAAGAAGGGCTCGGTGTATTCCAGAATAGCGGCGCGGATTACCTGATCGCTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/2931464‑2931388‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctattCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCCGTCGTAAAT > W3110S.gb/2931418‑2931483 CCAACCCAACAATTACTGTCGTCAAAGAAGGGCTCGGTGTATTCCAGAATAGCGGCGCGGATTACCTGATC < 1:4763400/71‑1 AACCCAACAATTACTGTCGTCAAAGAAGGGCTCGGTGTATTCCAGAATAGCGGCGCGGATTACCTGATCG > 1:6733796/1‑70 ACCCAACAATTACTGTCGTCAAAGAAGGGCTCGGTGTATTCCAGAATAGCGGCGCGGATTACCTGATCGC > 1:5822341/1‑70 CCAACAATTACTGTCGTCAAAGAAGGTCTCGGTGTATTCCAGAATAGCGGCGCGGATTACCTGATCGCTAT < 1:3480060/71‑1 taGTCAAAGAAGGGCTCGGTGTATTCCAGAATAGCGGCGCGGATTACCTGATCGC < 1:6441788/53‑1 GAAGGGCTCGGTGTATTCCAGAATAGCGGCGCGGATTACCTGATCGCTATT < 1:2840846/51‑1 TATTCCAGAATAGCGGCGCGGATTACCTGATCGCTAT < 1:1782555/37‑1 TATTCCAGAATAGCGGCGCGGATTACCTGATCGCTAT < 1:5496057/37‑1 GAATAGCGGCGCGGATTACCTGATCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTT > 1:3069222/1‑71 GAATAGCGGCGCGGATTACCTGATCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGA > 1:6456343/1‑60 AATAGCGGCGCGGATTACCTGATCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTG > 1:2573692/1‑71 AATAGCGGCGCGGATTACCTGATCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTG > 1:1173169/1‑71 ATAGCGGCGCGGATTACCTGATCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGG > 1:4715265/1‑71 ATAGCGGCGCGGATTACCTGATCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGG > 1:5396330/1‑71 CGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTG < 1:2800011/53‑1 CGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTG < 1:2745029/53‑1 CTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCCGTCGTAAAT > 1:7828572/1‑71 ATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGT > 1:6115394/1‑47 TTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTG < 1:2412724/43‑1 TTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGT < 1:2923228/41‑1 CCAACCCAACAATTACTGTCGTCAAAGAAGGGCTCGGTGTATTCCAGAATAGCGGCGCGGATTACCTGATCGCTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/2931464‑2931388‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctattCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCCGTCGTAAAT > W3110S.gb/2931418‑2931483 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |