| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 4196941 = | 134 (1.650) | 3 (0.040) | 3/90 | NT | 2.1% | coding (621/1332 nt) | secY | preprotein translocase membrane subunit |
| ? | W3110S.gb | 4196976 = | 160 (2.140) | coding (656/1332 nt) | secY | preprotein translocase membrane subunit | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGTCACTGCAAATACTAATACTGCAACCAACAGCAACACGAGGAAGTGCAGGTCGCCTTGACGCGCTTGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/4197013‑4196941‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcgTGTTGCTGTTGGTTGCAGTATTAGTATTTGCAGTGACGTTCTTTGTTGTATTTGTTGAGCGTGGTCAACG > W3110S.gb/4196976‑4197045 CGTCACTGCAAATACTAATACTGCAACCAACAGCAACACGAGGAAGTGCAGGTCGCCTTGACGCGCTTGCT < 1:2328490/71‑1 GTCACTGCAAATACTAATACTGCAACCAACAGCAACACGAGGAAGTGCAGGTCGCCTTGACGCGCTTGCTC > 1:1734611/1‑71 GTCACTGCAAATACTAATACTGCAACCAACAGCAACACGAGGAAGTGCAGGTCGCCTTGACGCGCTTGCTC > 1:6926055/1‑71 GTCACTGCAAATACTAATACTGCAACCAACAGCAACACGAGGAAGTGCAGGTCGCCTTGACGCGCTTGCTC > 1:2199883/1‑71 GTCACTGCAAATACTAATACTGCAACCAACAGCAACACGAGGAAGTGCAGGTCGCCTTGACGCGCTTGCTC > 1:2993303/1‑71 GGAAGTGCAGGTCGCCTTGACGCGCTTGCTCGTGTTGCTGTTGGTTGCAGTATTAGTATTTGCAGTGACGT > 1:2079860/1‑71 GAAGTGCAGGTCGCCTTGACGCGCTTGCTCGTGTTGCTGTTGGTTGCAGT > 1:3620303/1‑50 AGTGCAGGTCGCCTTGACGCGCTTGCTCGTGTTGCTGTTGGTTGCAG > 1:2415998/1‑47 taCTCGTGTTGCTGTTGGTTGCAGTATTAGTATTTGCAGTGACGTTCTTTGTTGTATTTGT > 1:3352189/3‑61 CTCGTGTTGCTGTTGGTTGCAGTATTAGTATTTGCAGTGACGTTCTTTGTTGTATTTGTTGAGCGTGGTCA < 1:2367129/71‑1 CTCGTGTTGCTGTTGGTTGCAGTATTAGTATTTGCAGTGACGTTCTTTGTTGTATTTGTTGAGCGTGGTCA < 1:7524769/71‑1 CGTGTTGCTGTTGGTTGCAGTATTAGTATTTGCAGTGACGTTCT < 1:4611952/44‑1 CGTGTTGCTGTTGGTTGCAGTATTAGTATTTGCAGTGACG < 1:4561974/40‑1 CGTGTTGCTGTTGGTTGCAGTATTAGTATTTGCAGTGACG < 1:2042648/40‑1 CGTGTTGCTGTTGGTTGCAGTATTAGTATTTGCAGTGACG < 1:7883575/40‑1 GTGTTGCTGTTGGTTGCAGTATTAGTATTTGCAGTGACGTTCTTTGTTGTATTTGTTGAGCGTGGTCAACG < 1:1406793/71‑1 GTGTTGCTGTTGGTTGCAGTATTAGTATTTGCAGTGACGTTCTTTGTTGTATTTGTTGAGCGTGGTCAACG < 1:6072629/71‑1 GTGTTGCTGTTGGTTGCAGTATTAGTATTTGCAGTGACGTTCTTTGTTGTATTTGTTGAGCGTGGTCAACG < 1:679944/71‑1 CGTCACTGCAAATACTAATACTGCAACCAACAGCAACACGAGGAAGTGCAGGTCGCCTTGACGCGCTTGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/4197013‑4196941‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcgTGTTGCTGTTGGTTGCAGTATTAGTATTTGCAGTGACGTTCTTTGTTGTATTTGTTGAGCGTGGTCAACG > W3110S.gb/4196976‑4197045 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |