| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 4333025 = | 89 (1.090) | 10 (0.140) | 3/84 | NT | 13.6% | coding (1211/2229 nt) | yjdA | conserved hypothetical protein with nucleoside triphosphate hydrolase domain |
| ? | W3110S.gb | 4333058 = | 51 (0.730) | coding (1244/2229 nt) | yjdA | conserved hypothetical protein with nucleoside triphosphate hydrolase domain | |||||
AATTCAACAGTTTATGCGCGGCAGATCGCAGAGCATACAACGAGGCGTTAGCGTAAGCGGCATGAAGCAACGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/4333099‑4333025‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgcctCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTGG > W3110S.gb/4333058‑4333126 AATTCAACAGTTTATGCGCGGCAGATCGCAGAGCATACAACGAGGCGTTAGCGTAAGCGGCATGAAGCAAC > 1:6537891/1‑71 ATTCAACAGTTTATGCGCGGCAGATCGCAGAGCATACAACGAGGCGTTAGCGTAAGCGGCATGAAGCAAC < 1:332642/70‑1 CAACAGTTTATGCGCGGCAGATCGCAGAGCATACAACGAGGCGTTAGCGTAAGCGGCATGAAGCAACGCCT > 1:7356850/1‑71 GTTTATGCGCGGCAGATCGCAGAGCATACAACGAGGCGTTAGCGTAAGCGGCATGAAGCAAC < 1:7362781/62‑1 GGCAGATCGCAGAGCATACAACGAGGCGTTAGCGTAAGCGGCATGAAGCAA > 1:1342455/1‑51 GGCAGATCGCAGAGCATACAACGAGGCGTTAGCGTAAGCGGCATGAAGCAA > 1:5295581/1‑51 GCAGATCGCAGAGCATACAACGAGGCGTTAGCGTAAGCGGCATGAAGCAAC > 1:6890528/1‑51 GCAGATCGCAGAGCATACAACGAGGCGTTAGCGTAAGCGGCATGAAGCAAC > 1:703110/1‑51 GCGTTAGCGTAAGCGGCATGAAGCAACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAA > 1:3213534/1‑71 GCGTTAGCGTAAGCGGCATGAAGCAACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAA > 1:350837/1‑71 GCGTTAGCGTAAGCGGCATGAAGCAACGCCTCGTTGTATGCTCTGCGA > 1:1410835/1‑48 GCGTTAGCGTAAGCGGCATGAAGCAACGCCTCGTTGTATGCTCTGCGA > 1:1401416/1‑48 GTTAGCGTAAGCGGCATGAAGCAACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATT < 1:3089139/71‑1 GTTAGCGTAAGCGGCATGAAGCAACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATT < 1:1369602/71‑1 GTTAGCGTAAGCGGCATGAAGCAACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATT < 1:6516048/71‑1 TAGCGTAAGCGGCATGAAGCAACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTAC > 1:2066120/1‑71 TAGCGTAAGCGGCATGAAGCAACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTAC > 1:1266127/1‑71 TAGCGTAAGCGGCATGAAGCAACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTAC > 1:5900327/1‑71 AACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGG > 1:3495482/1‑67 AACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGG > 1:6574024/1‑67 AACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCAT > 1:5523216/1‑36 ACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATAC < 1:723357/71‑1 ACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATAC < 1:2054499/71‑1 ACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATAC < 1:7610938/71‑1 ACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAAT < 1:6379459/69‑1 GCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCT < 1:2086705/71‑1 CCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTG < 1:4085262/71‑1 CTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTGG < 1:7195373/71‑1 CTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTG > 1:5771577/1‑70 TCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAA < 1:5770230/41‑1 TCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAA < 1:2716950/41‑1 TCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAA < 1:7746359/41‑1 AATTCAACAGTTTATGCGCGGCAGATCGCAGAGCATACAACGAGGCGTTAGCGTAAGCGGCATGAAGCAACGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/4333099‑4333025‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgcctCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTGG > W3110S.gb/4333058‑4333126 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |