| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 4483746 = | 84 (1.030) | 4 (0.060) | 4/86 | NT | 5.4% | coding (474/504 nt) | yjgM | predicted acetyltransferase |
| ? | W3110S.gb | 4483782 = | 67 (0.940) | coding (438/504 nt) | yjgM | predicted acetyltransferase | |||||
GAAGCCATTGCGCTTTATGAGCATTTGGGCTTTGAGCATATCGACTATGCGCTTGGCTGCACGGGCCATGTCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/4483820‑4483746‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgatATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGAT > W3110S.gb/4483782‑4483846 GAAGCCATTGCGCTTTATGAGCATTTGGGCTTTGAGCATATCGACTATGCGCTTGGCTGCACGGGCCATGT > 1:6151544/1‑71 AGCCATTGCGCTTTATGAGCATTTGGGCTTTGAGCATATCGACTATGCGCTTGGCTGCACGGGCCATGTCG < 1:3930207/71‑1 GCATTTGGGCTTTGAGCATATCGACTATGCGCTTGGCTGCACGGGCCATGTCGA > 1:2286335/1‑54 GCATTTGGGCTTTGAGCATATCGACTATGCGCTTGGCTGCACGGGCCATGTCGA > 1:5002398/1‑54 GAGCATATCGACTATGCGCTTGGCTGCACGGGCCATGTCGA > 1:3306108/1‑41 GACTATGCGCTTGGCTGCACGGGCCATGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCT < 1:5678779/70‑1 ACTATGCGCTTGGCTGCACGGGCCATGTCGATATGCTCAAAGCCCAAAT < 1:1545926/49‑1 TATGCGCTTGGCTGCACGGGCCATGTCGATATGCTCAAAGCCCAAATGC > 1:3378142/1‑49 GCTTGGCTGCACGGGCCATGTCGATATGCTCAAAGCCCAAATGCTC > 1:493175/1‑46 GTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGAT < 1:4283362/71‑1 GTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGA < 1:3321934/70‑1 GTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGA > 1:6000965/1‑70 GTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGA < 1:695059/70‑1 GTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGA > 1:71216/1‑70 TCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAA > 1:5103670/1‑37 TCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAA > 1:6743058/1‑37 TCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCA > 1:5630050/1‑36 TATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGC > 1:280025/1‑37 GAAGCCATTGCGCTTTATGAGCATTTGGGCTTTGAGCATATCGACTATGCGCTTGGCTGCACGGGCCATGTCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/4483820‑4483746‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgatATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGAT > W3110S.gb/4483782‑4483846 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |