| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 89227 = | 71 (0.870) | 5 (0.070) | 4/84 | NT | 7.6% | intergenic (+195/‑407) | fruR/mraZ | DNA‑binding transcriptional dual regulator/conserved hypothetical protein |
| ? | W3110S.gb | 89264 = | 60 (0.860) | intergenic (+232/‑370) | fruR/mraZ | DNA‑binding transcriptional dual regulator/conserved hypothetical protein | |||||
Only 100 of 118 total aligned reads displayed.
GCCCGTTAATTAACTCACCAGCTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTGCGCAAACCCGCTGG > W3110S.gb/89157‑89295 | ggttaacagtccttgttacgtctgtgtggcgcttgatgccagcgggtttgcgcaaaagcaaagaaaagtgt < 1:4512960‑M1/1‑1 (MQ=255) gttaacagtccttgttacgtctgtgtggcgcttgatgccagcgggtttgcgcaaaagcaaagaaaagtgtt < 1:3522568‑M1/2‑1 (MQ=255) cccgTTAATTAACTCACCAGCTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTAttt < 1:5884653/71‑1 (MQ=255) ccgTTAATTAACTCACCAGCTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTAtttt < 1:5908597/71‑1 (MQ=255) cgTTAATTAACTCACCAGCTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTg < 1:1927383/71‑1 (MQ=255) cgTTAATTAACTCACCAGCTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTg < 1:2910551/71‑1 (MQ=255) gTTAATTAACTCACCAGCTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGt < 1:1354915/71‑1 (MQ=255) aacagtccttgttacgtctgtgtggcgcttgatgccagcgggtttgcgcaaaagcaaagaaaagtgtttgt < 1:471264‑M1/5‑1 (MQ=255) aacagtccttgttacgtctgtgtggcgcttgatgccagcgggtttgcgcaaaagcaaagaaaagtgtttgt < 1:4178439‑M1/5‑1 (MQ=255) aacagtccttgttacgtctgtgtggcgcttgatgccagcgggtttgcgcaaaagcaaagaaaagtgtttg > 1:3489803‑M1/67‑70 (MQ=255) acagtccttgttacgtctgtgtggcgcttgatgccagcgggtttgcgcaaaagcaaagaaaagtgtttgtt > 1:5332102‑M1/66‑71 (MQ=255) acagtccttgttacgtctgtgtggcgcttgatgccagcgggtttgcgcaaaagcaaagaaaagtgtttgt > 1:356666‑M1/66‑70 (MQ=255) acagtccttgttacgtctgtgtggcgcttgatgccagcgggtttgcgcaaaagcaaagaaaagtgtttgt < 1:73577‑M1/5‑1 (MQ=255) taattaaCTCACCAGCTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTAttt > 1:720681/1‑66 (MQ=255) taattaaCTCACCAGCTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGtt > 1:5830035/1‑70 (MQ=255) taattaaCTCACCAGCTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTa > 1:1870593/1‑71 (MQ=255) agtccttgttacgtctgtgtggcgcttgatgccagcgggtttgcgcaaaagcaaagaaaagtgtttgt < 1:6947480‑M1/5‑1 (MQ=255) agtccttgttacgtctgtgtggcgcttgatgccagcgggtttgcgcaaaagcaaagaaaagtgTTTGTTa < 1:5084712‑M1/7‑1 (MQ=255) aattaaCTCACCAGCTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTa > 1:2283983/1‑70 (MQ=255) ttgttacgtctgtgtggcgcttgatgccagcgggtttgcgcaaaagcaaagaaaagtgTTTGTTa > 1:3627014‑M1/59‑65 (MQ=255) aCTCACCAGCTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATgc < 1:6993967/70‑1 (MQ=255) cTCACCAGCTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATgcgg < 1:2799972/71‑1 (MQ=255) tCACCAGCTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTAttt < 1:2283547/58‑1 (MQ=255) aCCAGCTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTg > 1:5985155/1‑58 (MQ=255) aCCAGCTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATgcggcg < 1:854013/70‑1 (MQ=255) aGCTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGa < 1:6915272/71‑1 (MQ=255) cTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGa < 1:1464428/66‑1 (MQ=255) cTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGa < 1:5274166/66‑1 (MQ=255) gAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCattatt < 1:1295278/48‑1 (MQ=255) gAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGt < 1:6445363/52‑1 (MQ=255) gAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTg > 1:6021798/1‑71 (MQ=255) gAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTg > 1:366391/1‑71 (MQ=255) aaaTTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGa > 1:901302/1‑63 (MQ=255) aaaTTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGa > 1:470962/1‑63 (MQ=255) aaaTTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAAtt < 1:6939030/69‑1 (MQ=255) gtggcgcttgatgccagcgggtttgcgctaaagcaaagaaaagtgtt < 1:4705125‑M1/2‑1 (MQ=255) gtggcgcttgatgccagcgggtttgcgcaaaagcaaagaaaagtgtt < 1:707140‑M1/2‑1 (MQ=255) aaTTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTAttt < 1:5285212/47‑1 (MQ=255) tggcgcttgatgccagcgggtttgcgcaaaagcaaagaaaagtgTTTGTTACATGCGGCGATGAATTGcc < 1:7079745‑M1/26‑1 (MQ=255) ttCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTa < 1:6016183/50‑1 (MQ=255) ttCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGaa < 1:2334815/64‑1 (MQ=255) tCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGAt > 1:7707005/1‑71 (MQ=255) cacaATAATTAAGTGATATCGACAGCGCGTTTTTGGATTATTTTGTTACATGCGGCGATGAATTGCCGAtt > 1:1553238/1‑71 (MQ=255) cacaATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGAtt > 1:3530975/1‑71 (MQ=255) cacaATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGAtt > 1:3918353/1‑71 (MQ=255) gcttgatgccagcgggtttgcgcaaaagcaaagaaaagtgt > 1:6837210‑M1/41‑41 (MQ=255) acaATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATgcggc < 1:7115803/55‑1 (MQ=255) cttgatgccagcgggtttgcgcaaaagcaaagaaaagtgttt < 1:6300164‑M1/3‑1 (MQ=255) cttgatgccagcgggtttgcgcaaaagcaaagaaaagtgttt < 1:4925469‑M1/3‑1 (MQ=255) caATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTa < 1:3183935/71‑1 (MQ=255) aataatTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGAtta < 1:871372/58‑3 (MQ=255) aataatTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGa < 1:3018627/58‑1 (MQ=255) taatTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTg < 1:4808010/40‑1 (MQ=255) atTAAGTGATATCGACAGCGCGTTTTTGCattatt > 1:3093212/1‑35 (MQ=255) atTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGt > 1:7217761/1‑39 (MQ=255) ttAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGtt > 1:300950/1‑39 (MQ=255) ttAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGtt > 1:6621807/1‑39 (MQ=255) cagcgggtttgcgcaaaagcaaagaaaagtgtttgtt < 1:865992‑M1/6‑1 (MQ=255) aaGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAacac > 1:6536432/1‑71 (MQ=255) aaGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAacac > 1:3927540/1‑71 (MQ=255) aGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGAtt < 1:7351315/60‑1 (MQ=255) tGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTa > 1:7776492/1‑60 (MQ=255) tGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTa > 1:5961801/1‑60 (MQ=255) tGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACttt > 1:2120728/1‑71 (MQ=255) cgggtttgcgcaaaagcaaagaaaagggTTTGTTACATGCGGCGATGAATTGCCGAt > 1:4459777‑M1/29‑57 (MQ=255) gggtttgcgcaaaagcaaagaaaagtgTTTGTTACATGCGGCGATGAATTGCCg > 1:247496‑M1/28‑54 (MQ=255) gggtttgcgcaaaagcaaagaaaagtgTTTGTTACATGCGGCGATGAATTGCCg > 1:6324277‑M1/28‑54 (MQ=255) atatCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATg < 1:3377696/45‑1 (MQ=255) atatCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATg < 1:2241178/45‑1 (MQ=255) tatCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCt > 1:7053285/1‑71 (MQ=255) tatCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCt > 1:1881741/1‑71 (MQ=255) tCGACAGCGCGTTTTTGCATTATTTTGTTACATgcggc < 1:4148956/38‑1 (MQ=255) tCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATg < 1:7147297/42‑1 (MQ=255) aCAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACTCTTTTc < 1:2598/65‑1 (MQ=255) cAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCtt < 1:7766280/71‑1 (MQ=255) cAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCtt < 1:7814216/71‑1 (MQ=255) caaaagcaaagaaaagtgTTTGTTACATGCGGCGATGAATTGCCGAt < 1:2809894‑M1/29‑1 (MQ=255) gcgTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGcc < 1:377666/41‑1 (MQ=255) gcgTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCg < 1:260127/42‑1 (MQ=255) gcgTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTaacaaaca < 1:385737/54‑1 (MQ=255) cgTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTgcg < 1:3921568/71‑1 (MQ=255) tttttGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTGCGCa < 1:4212781/71‑1 (MQ=255) tttttGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTGCGCa < 1:5570608/71‑1 (MQ=255) ttttGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTgcgc > 1:5830959/1‑69 (MQ=255) ttttGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTGCGCa > 1:2827217/1‑70 (MQ=255) tttGCATTATTTTGTTACATGCGGCGATGAATTGCCGAt > 1:7411827/1‑39 (MQ=255) tttGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTGCGCaa < 1:7515667/70‑1 (MQ=255) cATTATTTTGTTACATGCGGCGATGAATTGCCGAt < 1:179582/35‑1 (MQ=255) cATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTGCGCAAAccc < 1:5677576/70‑1 (MQ=255) cATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTGCGCAAAccc < 1:780370/70‑1 (MQ=255) cATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTGCGCAAAc > 1:5260413/1‑68 (MQ=255) cATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTGCGCAAACCCg > 1:5757881/1‑71 (MQ=255) cATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTGCGCAAACCCg < 1:1468775/71‑1 (MQ=255) tattTTGTTACATGCGGCGATGAATTGCCGATTTa < 1:1638601/35‑1 (MQ=255) tattTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTGCGCAAACCCGCTg > 1:4859495/1‑71 (MQ=255) attTTGTTACATGCGGCGATGAATTGCCGATTTaac > 1:823870/1‑36 (MQ=255) attTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTGCGCAAACCCGCTg < 1:2088993/70‑1 (MQ=255) ttttGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTGCGCAAACCCGCTgg < 1:7062683/70‑1 (MQ=255) ttttGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTGCGCAAACCCGCTgg < 1:5193246/70‑1 (MQ=255) ttttGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTGCGCAAACCCGCTgg < 1:6929914/70‑1 (MQ=255) | GCCCGTTAATTAACTCACCAGCTGAAATTCACAATAATTAAGTGATATCGACAGCGCGTTTTTGCATTATTTTGTTACATGCGGCGATGAATTGCCGATTTAACAAACACTTTTCTTTGCTTTTGCGCAAACCCGCTGG > W3110S.gb/89157‑89295 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |