| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 303884 = | 136 (1.670) | 8 (0.100) | 4/92 | NT | 6.0% | coding (546/711 nt) | yagV | conserved hypothetical protein |
| ? | W3110S.gb | 303908 = | 121 (1.580) | coding (522/711 nt) | yagV | conserved hypothetical protein | |||||
Only 100 of 168 total aligned reads displayed.
AGGCTGATGAACCACGTCTCCCGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGTCACCTTGTCGAAGGA > W3110S.gb/303815‑303952 | ccacgtcaggttcagtttaaatggtccttcgacaaggtgacaggaacggtaagtaacactggcaacacaTg < 1:3552187‑M1/2‑1 (MQ=255) cacgtcaggttcagtttaaatggtccttcgacaaggtgacaggaacggtaagtaacactggcaacacaTg < 1:5870908‑M1/2‑1 (MQ=255) gCTGATGAACCACGTCTCCCGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGc < 1:3901626/71‑1 (MQ=255) atgaACCACGTCTCCCGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTaa > 1:2822107/1‑71 (MQ=255) atgaACCACGTCTCCCGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTaa > 1:5721460/1‑71 (MQ=255) atgaACCACGTCTCCCGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTa < 1:1517209/70‑1 (MQ=255) tgaACCACGTCTCCCGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTaa > 1:1094605/1‑70 (MQ=255) tgaACCACGTCTCCCGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAAt > 1:6110351/1‑71 (MQ=255) aCCACGTCTCCCGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATc < 1:4753290/69‑1 (MQ=255) ccACGTCTCCCGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGt < 1:5279083/71‑1 (MQ=255) cACGTCTCCCGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTa < 1:4900017/71‑1 (MQ=255) cACGTCTCCCGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTa < 1:5075907/71‑1 (MQ=255) aCGTCTCCCGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTgg > 1:1935150/1‑59 (MQ=255) aCGTCTCCCGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAg > 1:6335851/1‑71 (MQ=255) aatggtccttcgacaaggtgacaggaacggtaagtaacactggcaacacaTGGCTTAATCAGTAGCTTaa > 1:2065499‑M1/51‑70 (MQ=255) ccGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTgg > 1:618610/1‑52 (MQ=255) ccGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTgg > 1:5856135/1‑52 (MQ=255) ccGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTa < 1:2145689/68‑1 (MQ=255) ccGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTa < 1:5020669/68‑1 (MQ=255) cGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTaaa < 1:1469432/69‑1 (MQ=255) cGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAAcc < 1:2387368/71‑1 (MQ=255) cGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAAcc < 1:3511747/71‑1 (MQ=255) cGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAAc > 1:6876696/1‑70 (MQ=255) ggACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCa > 1:3723167/1‑71 (MQ=255) ggACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCa < 1:7113073/71‑1 (MQ=255) gACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCAt > 1:1254540/1‑71 (MQ=255) gTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTaa < 1:5298472/63‑1 (MQ=255) gTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTaa < 1:832942/63‑1 (MQ=255) gTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTaa < 1:590465/63‑1 (MQ=255) aGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGTCTTaa < 1:4828275/49‑1 (MQ=255) aGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTa > 1:7179292/1‑60 (MQ=255) aGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTa > 1:1208110/1‑60 (MQ=255) aGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGtt > 1:4177254/1‑71 (MQ=255) gATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTg > 1:7531775/1‑71 (MQ=255) aTACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAAt > 1:2973536/1‑48 (MQ=255) tACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAg < 1:7374037/50‑1 (MQ=255) aCCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGc > 1:1925220/1‑69 (MQ=255) cAGGCATCGCCTTCCTCTTCGGTCGAATCACATACTGGCTTAATCa > 1:275521/1‑46 (MQ=255) aGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAgtg > 1:6549160/1‑71 (MQ=255) gtgacaggaacggtaagtaacactggcaacacaTGGCTTAATCAGTAGCTTAAACCAt < 1:7577940‑M1/25‑1 (MQ=255) gtgacaggaacggtaagtaacactggcaacacaTGGCTTAATCAGTAGCTTAAACCAt < 1:2853479‑M1/25‑1 (MQ=255) ggCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGc > 1:7197110/1‑65 (MQ=255) ggCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGc > 1:2374297/1‑65 (MQ=255) ggCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAgtgt > 1:2533735/1‑71 (MQ=255) ggCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAgtgt < 1:24924/71‑1 (MQ=255) ggCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAgtgt > 1:6948439/1‑71 (MQ=255) ggCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAgtgt > 1:6371384/1‑71 (MQ=255) gCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTaaa < 1:3240368/53‑1 (MQ=255) gCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTaaa < 1:1860688/53‑1 (MQ=255) cATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCAtgt < 1:5343519/58‑1 (MQ=255) aTCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCtt < 1:4601508/48‑1 (MQ=255) aTCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCtt < 1:3103577/48‑1 (MQ=255) aTCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCtt < 1:53275/48‑1 (MQ=255) tCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTaa < 1:6890031/49‑1 (MQ=255) cGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTaa > 1:1975458/1‑48 (MQ=255) cGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTaa > 1:7779903/1‑48 (MQ=255) gCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCAtgtg > 1:4504750/1‑55 (MQ=255) gCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGtt < 1:7803107/57‑1 (MQ=255) gCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGttactta < 1:6017007/71‑1 (MQ=255) ttCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTaa > 1:3154469/1‑44 (MQ=255) ttCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCa > 1:1063810/1‑58 (MQ=255) tCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGt > 1:2609872/1‑71 (MQ=255) ccTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCAtgt > 1:3689780/1‑49 (MQ=255) ctctTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTc < 1:3650172/71‑1 (MQ=255) ctctTCGGTCGAATCACATCCAGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTc < 1:267304/71‑1 (MQ=255) tctTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGttact < 1:182289/62‑1 (MQ=255) tctTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGttact < 1:3916761/62‑1 (MQ=255) tctTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGttact < 1:7280962/62‑1 (MQ=255) tCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCATGt > 1:5432851/1‑71 (MQ=255) cGGTCGAATCACATCCTGGCTTAATCAGTAGCTTaaa > 1:1788515/1‑37 (MQ=255) cGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCt < 1:316675/68‑1 (MQ=255) cGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTg < 1:4776665/69‑1 (MQ=255) cGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTg < 1:7013873/69‑1 (MQ=255) cGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTg < 1:7064167/69‑1 (MQ=255) cGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGt > 1:7597489/1‑70 (MQ=255) ggTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGTCa < 1:271610/71‑1 (MQ=255) gTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCAt < 1:4074464/39‑1 (MQ=255) cGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGtt > 1:7243698/1‑61 (MQ=255) cGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGTCACCt > 1:5585896/1‑71 (MQ=255) gAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAgt > 1:7254290/1‑47 (MQ=255) gAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGTCACCtt < 1:6484233/71‑1 (MQ=255) gAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGTCACCtt > 1:6777872/1‑71 (MQ=255) aaTCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGtt < 1:468252/49‑1 (MQ=255) tCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGttac > 1:5498959/1‑49 (MQ=255) tCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTc < 1:4138556/58‑1 (MQ=255) tCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGTCACCTTGTc < 1:3190414/71‑1 (MQ=255) tCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGTCACCTTGTc > 1:1994283/1‑71 (MQ=255) tCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGTCACCTTGTc > 1:5095883/1‑71 (MQ=255) acaTCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGTCACCTTGTCg < 1:3840920/70‑1 (MQ=255) acaTCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGTCACCTTGTCGa < 1:636025/71‑1 (MQ=255) acaTCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGTCACCTTGTCGa < 1:5501596/71‑1 (MQ=255) acaTCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGTCACCTTGTCGa < 1:5256222/71‑1 (MQ=255) acaTCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGTCACCTTGTCGa < 1:3433768/71‑1 (MQ=255) caTCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTAGCGTTCCTGTCACCTTGTCg > 1:5615109/1‑69 (MQ=255) tCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGcc > 1:5487725/1‑36 (MQ=255) ccTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTc < 1:2414618/52‑1 (MQ=255) ccTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTc < 1:4365916/52‑1 (MQ=255) ccTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGTCACCTTGTCGAAGGa > 1:7861404/1‑71 (MQ=255) TGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGTCACCt > 1:6004343‑M1/1‑59 (MQ=255) TGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGTCACCt > 1:3568218‑M1/1‑59 (MQ=255) | AGGCTGATGAACCACGTCTCCCGGACGTAGATACCAGGCATCGCCTTCCTCTTCGGTCGAATCACATCCTGGCTTAATCAGTAGCTTAAACCATGTGTTGCCAGTGTTACTTACCGTTCCTGTCACCTTGTCGAAGGA > W3110S.gb/303815‑303952 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |