| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 1299486 = | 59 (0.720) | 4 (0.060) | 3/86 | NT | 6.8% | coding (213/2676 nt) | adhE | fused acetaldehyde‑CoA dehydrogenase and iron‑dependent alcohol dehydrogenase and pyruvate‑formate lyase deactivase |
| ? | W3110S.gb | 1299507 = | 58 (0.810) | coding (192/2676 nt) | adhE | fused acetaldehyde‑CoA dehydrogenase and iron‑dependent alcohol dehydrogenase and pyruvate‑formate lyase deactivase | |||||
GTCGTCTTCAGACAGAACACCACAGGTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCATTTTCGCGAGT > W3110S.gb/1299420‑1299555 | gcagatgctcgaatcccactcgcgaaaatggccgttgccgaatccggcatgggtatcgtcgaagatAAAGt < 1:2325339‑M1/5‑1 (MQ=255) cagatgctcgaatcccactcgcgaaaatggccgttgccgaatccggcatgggtatcgtcgaagatAAAg > 1:3244395‑M1/66‑69 (MQ=255) gtcTTCAGACAGAACACCACAGGTTTTTTCATCTTTATAGGCGTTGTGGATATATTCAGAAGCAAAGTGGt < 1:87846/71‑1 (MQ=255) ctcTTCAGACAGAACACCACAGGTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGt > 1:5852226/2‑71 (MQ=255) ttCAGACAGAACACCACAGGTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGtttt > 1:7551381/1‑71 (MQ=255) tCAGACAGAACACCACAGGTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGttttt > 1:6007228/1‑71 (MQ=255) cagacagaACACCACAGGTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGttttt > 1:7636279/1‑70 (MQ=255) cagacagaACACCACAGGTTTTTTCATCTTTATAGGAGTTGTAGATATATTCAGAAGCAAAGTGGttttt > 1:5603992/1‑70 (MQ=255) cagacagaACAC‑‑CAGGTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGa < 1:7695876/70‑1 (MQ=39) acagaACACCACAGGTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGttttt < 1:1748815/67‑1 (MQ=255) acagaACACCACAGGTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGAt > 1:4447426/1‑70 (MQ=255) gaACACCACAGGTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACt > 1:6224980/1‑71 (MQ=255) gaACACCACAGGTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACt < 1:5324868/71‑1 (MQ=255) acacCACAGGTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACttt < 1:7510005/71‑1 (MQ=255) acacCACAGGTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACttt < 1:1407291/71‑1 (MQ=255) gcgaaaatggccgttgccgaatccggcatgggtatcgtcgaagatAAAGTGGTTTTTGATCACt > 1:1656033‑M1/46‑64 (MQ=255) caGGTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTc < 1:5673394/71‑1 (MQ=255) aGGTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTc > 1:4848996/1‑70 (MQ=255) aGGTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTc > 1:5606895/1‑70 (MQ=255) ggTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTc < 1:6343268/69‑1 (MQ=255) gTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTg > 1:1002960/1‑54 (MQ=255) gTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTcgac < 1:7446599/71‑1 (MQ=255) gTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTcgac < 1:3374134/71‑1 (MQ=255) tttttCATCTTTATAGGCGTTGTAGATATATTCAGAAGCaaa > 1:2404408/1‑42 (MQ=255) tttttCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGAt > 1:2550293/1‑54 (MQ=255) ttttCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGtt > 1:6979509/1‑47 (MQ=255) ttttCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTcgacga > 1:7671981/1‑70 (MQ=255) ttttCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTcgacg > 1:3389208/1‑69 (MQ=255) ggccgttgccgaatccggcatgggtatcgtcgaagatAAAg > 1:6749703‑M1/38‑41 (MQ=255) ggccgttgccgaatccggcatgggtatcgtcgaagatAAAg > 1:1431266‑M1/38‑41 (MQ=255) ggccgttgccgaatccggcatgggtatcgtcgaagatAAAg > 1:2991792‑M1/38‑41 (MQ=255) ttCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATAc > 1:3156479/1‑71 (MQ=255) tCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTc < 1:1617839/62‑1 (MQ=255) cgttgccgaatccggcatgggtatcgtcgaagatAAAGTGGTTTTTGATCACTTTa > 1:6838849‑M1/35‑56 (MQ=255) cgttgccgaatccggcatgggtatcgtcgaagatAAAGTGGTTTTTGATCACTTTa > 1:2320010‑M1/35‑56 (MQ=255) cATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTc > 1:4547713/1‑61 (MQ=255) cATCTTTATAGGCGTTGCAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATAcc > 1:2623287/1‑70 (MQ=255) aTCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTcga < 1:3697970/62‑1 (MQ=255) aTCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTcga < 1:1973141/62‑1 (MQ=255) ttgccgaatccggcatgggtatcgtcgaagatAAAGTGGTTTTTGATCACTTTATc < 1:3528323‑M1/24‑1 (MQ=255) cTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATg > 1:6433772/1‑71 (MQ=255) tttATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACtt < 1:3462798/50‑1 (MQ=255) ttATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGtttt < 1:3790724/40‑1 (MQ=255) ttATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGtttt < 1:338445/40‑1 (MQ=255) ttATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGtttt < 1:5104792/40‑1 (MQ=255) tataGGCGTTGTAGATATATTCATAAGCAAAGTGGTTTTTGATCACTTTATCtt > 1:3737311/1‑54 (MQ=255) tataGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGcc < 1:782990/70‑1 (MQ=255) ggCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGAtt < 1:1955583/71‑1 (MQ=255) cGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCg > 1:2453812/1‑71 (MQ=255) ttGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTa < 1:7622463/42‑1 (MQ=255) ttGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTcgacg < 1:3761001/51‑1 (MQ=255) ttGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGc < 1:2196895/71‑1 (MQ=255) tatatTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGc > 1:1514547/1‑70 (MQ=255) tatTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTcgac < 1:4622506/41‑1 (MQ=255) tatTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTcgac < 1:4216802/41‑1 (MQ=255) atTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCaa < 1:4404382/63‑1 (MQ=255) atTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCaa < 1:20645/63‑1 (MQ=255) ttCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTcga < 1:4127016/38‑1 (MQ=255) ttCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTcga < 1:2133413/38‑1 (MQ=255) ttCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTcga < 1:6317725/38‑1 (MQ=255) ttCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGaaa > 1:317990/1‑62 (MQ=255) ttCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCAtt < 1:4392070/70‑1 (MQ=255) cAGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTc < 1:3006010/55‑1 (MQ=255) cAGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTc < 1:4285774/55‑1 (MQ=255) aGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCATTTTcg > 1:1052928/1‑71 (MQ=255) aGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCATTTTcg > 1:1708304/1‑71 (MQ=255) aGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCATTTTc > 1:5987651/1‑70 (MQ=255) aGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCATTTTc < 1:2345010/70‑1 (MQ=255) aGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCATTTTc < 1:7733539/70‑1 (MQ=255) aaGCAAAGTGGTTTTTGATCACTTTATCTTCGCCGATACCCATGCCGGATTCGGCAACGGCCATTTTcgc > 1:7015987/1‑70 (MQ=255) aaGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTc < 1:1262994/52‑1 (MQ=255) aaGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCAtt < 1:6434489/65‑1 (MQ=255) aaGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCATTTTcgcg < 1:6188821/71‑1 (MQ=255) aGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCATTTTcgc > 1:6173322/1‑69 (MQ=255) aGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCATTTTCGCGa < 1:6332332/71‑1 (MQ=255) aGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGACATTTTcgc > 1:3127743/1‑69 (MQ=255) ggAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCATTTTcgcg > 1:2130160‑M1/3‑69 (MQ=255) cAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCATTTTCGCGAGt < 1:412311/71‑1 (MQ=255) AAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACgg > 1:1089716‑M1/1‑56 (MQ=255) | GTCGTCTTCAGACAGAACACCACAGGTTTTTTCATCTTTATAGGCGTTGTAGATATATTCAGAAGCAAAGTGGTTTTTGATCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCATTTTCGCGAGT > W3110S.gb/1299420‑1299555 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |