| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1730724 | 79 (0.970) | 4 (0.060) | 4/80 | NT | 5.0% | intergenic (+16/‑77) | rnt/lhr | ribonuclease T (RNase T)/predicted ATP‑dependent helicase |
| ? | W3110S.gb | = 1730738 | 87 (1.310) | intergenic (+30/‑63) | rnt/lhr | ribonuclease T (RNase T)/predicted ATP‑dependent helicase | |||||
Only 100 of 162 total aligned reads displayed.
ACCGCTGGAAACGTCTGGGAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGAATA > W3110S.gb/1730656‑1730794 | aCCGCTGGAAACGTCTGGGAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCtgat > 1:7210719/1‑70 (MQ=255) ccGCTGGAAACGTCTGGGAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCtgatga < 1:3951591/71‑1 (MQ=255) gAAACGTCTGGGAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGc < 1:7692049/70‑1 (MQ=255) aCGTCTGGGAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATg < 1:204080/71‑1 (MQ=255) tCTGGGAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGAt < 1:1737232/70‑1 (MQ=255) tCTGGGAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATt > 1:322778‑M2/1‑70 (MQ=255) cTGGGAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATt < 1:6838616‑M2/70‑2 (MQ=255) cTGGGAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATt < 1:4330143‑M2/70‑2 (MQ=255) cTGGGAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATt < 1:3238380‑M2/70‑2 (MQ=255) gggAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGAatcattgcatgtcat < 1:960952‑M1/68‑16 (MQ=255) gggAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATtca > 1:7742960‑M2/1‑67 (MQ=255) gAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGAatcattgcatgtcatcaggc < 1:5421479‑M1/71‑21 (MQ=255) gAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATtcaggc > 1:7418249‑M2/1‑65 (MQ=255) gAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATtcaggc > 1:4952001‑M2/1‑65 (MQ=255) gAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATtcaggc > 1:1759657‑M2/1‑65 (MQ=255) gAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATtcagg < 1:4902522‑M2/70‑6 (MQ=255) aGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGAatcattgcatgtcatcaggca < 1:122083‑M1/71‑22 (MQ=255) aGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATtcaggca < 1:694661‑M2/71‑8 (MQ=255) aGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATtcaggc > 1:3321773‑M2/1‑64 (MQ=255) aGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATt > 1:3361228‑M2/1‑64 (MQ=255) gCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATtcaggcatc < 1:1177082‑M2/71‑10 (MQ=255) gCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATtcaggcatc < 1:6553433‑M2/71‑10 (MQ=255) cTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCt < 1:537227/71‑1 (MQ=255) ggCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCta > 1:2609256/1‑70 (MQ=255) ggCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCta > 1:7467478/1‑70 (MQ=255) gCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCtgatga < 1:7841537/47‑1 (MQ=255) gCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCtgatga < 1:6479829/47‑1 (MQ=255) gCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCtgatga < 1:125147/47‑1 (MQ=255) gCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAAt < 1:1534889/55‑1 (MQ=255) ccGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCTATGATTCAGGCATCTATAg > 1:1800502/1‑71 (MQ=255) cGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACa > 1:3080441/1‑47 (MQ=255) cGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACa > 1:5640261/1‑47 (MQ=255) cGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATtca > 1:4545462‑M2/1‑56 (MQ=255) cGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATtca > 1:354593‑M2/1‑56 (MQ=255) gCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTg < 1:1299737/71‑1 (MQ=255) cTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGAc > 1:2801714/1‑44 (MQ=255) aTCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGa > 1:7460585/1‑51 (MQ=255) aTCTGCCGCCGAAGAGGTGTAATCGAGTCGATACCTGATGACATGCAATGATTCAGGCATCTATAGTGAgg > 1:2361209/1‑71 (MQ=255) tCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAgg < 1:4467856/70‑1 (MQ=255) tGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATtcaggcatc > 1:2210982‑M2/1‑49 (MQ=255) tGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGa > 1:7405930/1‑66 (MQ=255) ccgccgAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGc < 1:4840779/67‑1 (MQ=255) ccgccgAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTAtt > 1:1063386/1‑71 (MQ=255) gccgAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTcc < 1:5070157/71‑1 (MQ=255) ccgAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCa < 1:4677591/71‑1 (MQ=255) cgAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCa > 1:5667440/1‑70 (MQ=255) gAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGa > 1:3633421/1‑41 (MQ=255) gAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGa > 1:1851630/1‑41 (MQ=255) gAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGa > 1:2709929/1‑41 (MQ=255) gAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGa > 1:5134705/1‑59 (MQ=255) aaGAGGTGTAATCGAGTCGATGCCTGATGACATGCAAt < 1:5909522/38‑1 (MQ=255) aaGAGGTGTAATCGAGTCGATGCCTGATGACATGCAAt < 1:1558838/38‑1 (MQ=255) aaGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTAtt > 1:4018610/1‑65 (MQ=255) agagGTGTAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGc > 1:3592822/1‑60 (MQ=255) gtgtAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAg > 1:1316289/1‑54 (MQ=255) gtgtAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCt < 1:6298882/57‑1 (MQ=255) tgtAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTg < 1:4556263/71‑1 (MQ=255) gtAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCtata > 1:7270223/1‑47 (MQ=255) aTCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTg > 1:4590686/1‑47 (MQ=255) aTCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTg > 1:5767824/1‑47 (MQ=255) cGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGa > 1:7198796/1‑70 (MQ=255) gAGTCGATGCCTGATGACATGCAATGATtcaggcat < 1:7552347‑M2/36‑9 (MQ=255) gAGTCGATGCCTGATGACATGCAATGATtcaggcat < 1:795419‑M2/36‑9 (MQ=255) gAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGc > 1:5082028/1‑65 (MQ=255) gAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGc > 1:2575192/1‑65 (MQ=255) gAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGata > 1:2148872/1‑71 (MQ=255) tCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATAtt > 1:6763062/1‑70 (MQ=255) tCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATAtt > 1:6024156/1‑70 (MQ=255) tCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATAtt > 1:5926529/1‑70 (MQ=255) tCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTc < 1:1493962/71‑1 (MQ=255) gATGCCTGAatcattgcatgtcatcaggcatcgactcgattacacctcttcggcggcagatagcggccagc < 1:995882‑M1/71‑63 (MQ=255) gATGCCTGAatcattgcatgtcatcaggcatcgactcgattacacctcttcggcggcagatagcggccagc < 1:6553433‑M1/71‑63 (MQ=255) gATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCa < 1:3909772/70‑1 (MQ=255) gATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCAc > 1:4603610/1‑71 (MQ=255) gATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCAc > 1:1098966/1‑71 (MQ=255) gATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCAc > 1:4604710/1‑71 (MQ=255) aTGCCTGAatcattgcatgtcatcaggcatcgactcgattacacctcttcggcggcagatagcgg > 1:5897175‑M1/1‑8 (MQ=255) aTGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTCCATGATATTCa < 1:914675/69‑1 (MQ=255) tGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGatat < 1:4712719/65‑1 (MQ=255) tGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACgg > 1:5642702/1‑71 (MQ=255) gCCTGAatcattgcatgtcatcaggcatcgactcgattacacctcttcggcggcagatagcggccagcctc > 1:4952001‑M1/1‑6 (MQ=255) gCCTGAatcattgcatgtcatcaggcatcgactcgattacacctcttcggcggcagatagcggccagcct > 1:3321773‑M1/1‑6 (MQ=255) gCCTGATGACATGCAATGATtcaggcatcgactcgattacacctcttcggcggcagatagcggccagcctc < 1:5421479‑M2/71‑52 (MQ=255) gCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACggg > 1:3793960/1‑71 (MQ=255) ccTGAatcattgcatgtcatcaggcatcgactcgattacacctcttcggcggcagatagcggccagcctc < 1:3201603‑M1/70‑66 (MQ=255) ccTGAatcattgcatgtcatcaggcatcgactcgattacacctcttcggcggcagatagcggccagcctc < 1:4902522‑M1/70‑66 (MQ=255) cTGATGACATGCAATGTTtcaggcatcgactcgattacacctcttcggcggcagatagcggccagcc > 1:4145004‑M2/1‑18 (MQ=255) cTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCAc < 1:6362208/46‑1 (MQ=255) cTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCa > 1:4199513/1‑65 (MQ=255) cTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCa > 1:6750863/1‑65 (MQ=255) tGAatcattgcatgtcatcaggcatcgactcgattacacctcttcggcggcagatagcggccagcctcc > 1:2098611‑M1/1‑3 (MQ=255) tGAatcattgcatgtcatcaggcatcgactcgattacacctcttcggcggcagatagcg > 1:354593‑M1/1‑3 (MQ=255) gatgaCATGCAATGATTCAGGCATCTATAGTGAGGCTATTc < 1:7683181/41‑1 (MQ=255) gatgaCATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGaa > 1:275655/1‑70 (MQ=255) gatgaCATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGaa > 1:1638399/1‑70 (MQ=255) atgaCATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGAATa < 1:2251470/71‑1 (MQ=255) aatcattgcatgtcatcaggcatcgactcgattacacctcttcggcggcagatagcggccagcctcccaga > 1:322778‑M1/1‑1 (MQ=255) aatcattgcatgtcatcaggcatcgactcgattacacctcttcggcggcagatagcggccagcctcccag < 1:4330143‑M1/70‑70 (MQ=255) aatcattgcatgtcatcaggcatcgactcgattacacctcttcggcggcagatagcggccagcctcccag < 1:6838616‑M1/70‑70 (MQ=255) aatcattgcatgtcatcaggcatcgactcgattacacctcttcggcggcagatagcggccagcctcccag < 1:6752551‑M1/70‑70 (MQ=255) | ACCGCTGGAAACGTCTGGGAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAATCGAGTCGATGCCTGATGACATGCAATGATTCAGGCATCTATAGTGAGGCTATTCCACGCATCCTGCATGATATTCACGGGGAATA > W3110S.gb/1730656‑1730794 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |