| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2580776 | 66 (0.810) | 8 (0.110) | 3/88 | NT | 10.9% | coding (658/1044 nt) | ypfG | hypothetical protein |
| ? | W3110S.gb | = 2580795 | 71 (0.970) | coding (639/1044 nt) | ypfG | hypothetical protein | |||||
Only 100 of 139 total aligned reads displayed.
CCTCACAGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGT > W3110S.gb/2580707‑2580846 | ccTCACAGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGa < 1:5234673/71‑1 (MQ=255)ccTCACAGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGa < 1:6892807/71‑1 (MQ=255) tCACAGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGAt > 1:1534972/1‑70 (MQ=255) cacaGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATc > 1:4838210/1‑70 (MQ=255) cacaGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTAACCTCACGACGCAATGGATc > 1:381923/1‑70 (MQ=255) acaGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATc > 1:4876440/1‑69 (MQ=255) acaGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATc > 1:4155311/1‑69 (MQ=255) acaGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATc < 1:2004688/69‑1 (MQ=255) acaGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCaa < 1:2236080/71‑1 (MQ=255) caGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAg < 1:771788/71‑1 (MQ=255) gCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGc > 1:2970387/1‑70 (MQ=255) gCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGc > 1:7654471/1‑70 (MQ=255) atcatcatcAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGagc < 1:2441016/70‑1 (MQ=255) atcatcaGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAgcg < 1:4810687/71‑1 (MQ=255) catcaGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGc > 1:6504495/1‑61 (MQ=255) catcaGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAgcg > 1:2827561/1‑69 (MQ=255) atcaGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGagcag > 1:6095993/1‑66 (MQ=255) cAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGAc < 1:657262‑M2/71‑2 (MQ=255) gcgcTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGtctgcgctgctcgcttgatcca < 1:1706015‑M1/71‑23 (MQ=255) cTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGtctgcgctgctcgcttgatccattg > 1:2069089‑M1/1‑46 (MQ=255) cTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGtctgcgctgctcgcttgatccattg > 1:4553054‑M1/1‑46 (MQ=255) cTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGtctgcgctgctcgcttgatccattg > 1:7848430‑M1/1‑46 (MQ=255) tttATCATAAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCa > 1:3059836/1‑71 (MQ=255) tATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAg < 1:6298027/49‑1 (MQ=255) tATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAg < 1:1750899/49‑1 (MQ=255) atcatcAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGa > 1:3750280/1‑51 (MQ=255) atcatcAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGa > 1:1879475/1‑51 (MQ=255) tcatcaGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGAc < 1:5651541‑M2/61‑2 (MQ=255) tcatcaGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATc < 1:2338389/69‑1 (MQ=255) tcatcaGTCAGCGCAGTGACATTCACATCACGACGCAAAGGATCAAGCGAGCAGCGCAGACCATTCATCCg > 1:1644681/1‑71 (MQ=255) tcagtcagCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGAccatt < 1:7166909‑M2/62‑6 (MQ=255) cagtcagCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCa > 1:6815455/1‑54 (MQ=255) cagtcagCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCa > 1:2541611/1‑54 (MQ=255) agtcagCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGt < 1:6182363/71‑1 (MQ=255) gtcagCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGt < 1:7356884/70‑1 (MQ=255) agCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTcc < 1:6505315/71‑1 (MQ=255) agCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTc > 1:90652/1‑70 (MQ=255) agCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTc > 1:4257238/1‑70 (MQ=255) cAGTGACATTCACCTCACGACGCAATGGATCAAGCGag > 1:6258996/1‑38 (MQ=255) cAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATaa > 1:2529358/1‑71 (MQ=255) cAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATaa > 1:192429/1‑71 (MQ=255) cAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATaa > 1:581292/1‑71 (MQ=255) cAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATa < 1:7202410/70‑1 (MQ=255) gTGACATTCACCTCACGACGCAATGGATCAAGCGag < 1:2915942/36‑1 (MQ=255) gTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGAc < 1:6063445‑M2/46‑2 (MQ=255) gTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGAc < 1:3322427‑M2/46‑2 (MQ=255) tGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATaa < 1:1215454/68‑1 (MQ=255) gACATTCACCTCACGACGCAATGGATCAAGCGagca > 1:271303/1‑36 (MQ=255) aCATTCACCTCACGACGCAATGGtctgcgctgctcgcttgatccatt > 1:5254271‑M1/1‑23 (MQ=255) aCATTCACCTCACGACGCAATGGtctgcgctgctcgcttgatccatt > 1:1327190‑M1/1‑23 (MQ=255) aCATTCACCTCACGACGCAATGGtctgcgctgctcgcttgatccatt > 1:2945770‑M1/1‑23 (MQ=255) aCATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGAccat > 1:4443175‑M2/1‑42 (MQ=255) aCATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGAccat > 1:5554442‑M2/1‑42 (MQ=255) aCATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGttt > 1:7368072/1‑60 (MQ=255) aTTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGAcca > 1:4093953‑M2/1‑40 (MQ=255) ttCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCaa < 1:7231882/71‑1 (MQ=255) cACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCg > 1:4795473/1‑48 (MQ=255) ccTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCg < 1:6002084/71‑1 (MQ=255) cTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCg < 1:6472145/70‑1 (MQ=255) tCACGACGCAATGGATCAAGCGAGCAGCGCAGAcca > 1:4765497‑M2/1‑33 (MQ=255) tCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATc < 1:5997650/59‑1 (MQ=255) acgacgCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCaa < 1:3426061/63‑1 (MQ=255) cgacgCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAg > 1:2217373/1‑45 (MQ=255) cgacgCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAg > 1:4704458/1‑45 (MQ=255) gacgCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATcc < 1:6247345/56‑1 (MQ=255) gacgCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATcc < 1:7346343/56‑1 (MQ=255) gacgCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCg > 1:3025569/1‑65 (MQ=255) cgCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAg > 1:4194594/1‑56 (MQ=255) cAATGGATCAAGCGAGCAGCGCAGAccattgcgtcgtgaggtgaatgtcactgcgctgactgatgataaag > 1:4553054‑M2/1‑25 (MQ=255) cAATGGATCAAGCGAGCAGCGCAGAccattgcgtcgtgaggtgaatgtcactgcgctgactgatgataaag > 1:2069089‑M2/1‑25 (MQ=255) cAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGttct < 1:4770887/70‑1 (MQ=255) aaTGGtctgcgctgctcgcttgatccattgcgtcgtgaggtgaatgtcactgcgctgactga < 1:7166909‑M1/62‑58 (MQ=255) aaTGGATCAAGCGAGCAGCGCAGAccattgcgtcgtgaggtgaatgt > 1:1327190‑M2/1‑24 (MQ=255) aaTGGATCAAGCGAGCAGCGCAGAccattgcgtcgtgaggtgaatgt > 1:5244915‑M2/1‑24 (MQ=255) aaTGGATCAAGCGAGCAGCGCAGAccattgcgtcgtgaggtgaatgt > 1:5254271‑M2/1‑24 (MQ=255) aaTGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCaaa < 1:4853560/57‑1 (MQ=255) aaTGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGttcttc < 1:7004605/71‑1 (MQ=255) aaTGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCACTTTCCAt > 1:5504935/1‑46 (MQ=255) aTGGtctgcgctgctcgcttgatccattgcgtcgtgaggtgaatgtcactgcgctgactgatgataaagcg < 1:1887667‑M1/71‑68 (MQ=255) aTGGtctgcgctgctcgcttgatccattgcgtcgtgaggtgaatgt > 1:4443175‑M1/1‑4 (MQ=255) aTGGtctgcgctgctcgcttgatccattgcgtcgtgaggtgaatgt > 1:5554442‑M1/1‑4 (MQ=255) aTGGtctgcgctgctcgcttgatccattgcgtcgtgaggtgaatgt > 1:7187543‑M1/1‑4 (MQ=255) aTGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCg < 1:3513809/71‑1 (MQ=255) tGGtctgcgctgctcgcttgatccattgcgtcgtgaggtgaat > 1:4093953‑M1/1‑3 (MQ=255) tGGtctgcgctgctcgcttgatccattgcgtcgtgaggtgaat > 1:4108531‑M1/1‑3 (MQ=255) tGGtctgcgctgctcgcttgatccattgcgtcgtga > 1:4765497‑M1/1‑3 (MQ=255) tGGATCAAGCGAGCAGCGCAGACCATTCATCCGcc > 1:1835618/1‑35 (MQ=255) tGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGttt > 1:7582195/1‑40 (MQ=255) tGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGttt > 1:3494682/1‑40 (MQ=255) tGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGtt > 1:7837046/1‑39 (MQ=255) tGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCAt < 1:6928111/44‑1 (MQ=255) tGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGa < 1:4700482/71‑1 (MQ=255) ggtctgcgctgctcgcttgatccattgcgtcgtgaggtgaatgtcactgcgctgactgatgataaagcgct > 1:2896313‑M1/1‑2 (MQ=255) ggATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAg > 1:886117/1‑50 (MQ=255) ggATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAg > 1:6303914/1‑50 (MQ=255) gtctgcgctgctcgcttgatccattgcgtcgtgaggtgaatgtcactgcgctgactgatgataaagcgctg < 1:1796201‑M1/71‑71 (MQ=255) gtctgcgctgctcgcttgatccattgcgtcgtgaggtgaatgtcactgcgctgactgatga < 1:5651541‑M1/61‑61 (MQ=255) gtctgcgctgctcgcttgatccattgcgtcgtgaggtgaatgtcac < 1:3322427‑M1/46‑46 (MQ=255) gtctgcgctgctcgcttgatccattgcgtcgtgaggtgaatgtcac < 1:4637296‑M1/46‑46 (MQ=255) gATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGt > 1:5141120/1‑71 (MQ=255) | CCTCACAGCTAATCATCATCAGCGCTTTATCATCAGTCAGCGCAGTGACATTCACCTCACGACGCAATGGATCAAGCGAGCAGCGCAGACCATTCATCCGCCAGTTTCCATAATCCAGCAAATCGTTGCGTTCTTCGAGT > W3110S.gb/2580707‑2580846 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |